mRNA_H-canaliculatus_F_contig15.3760.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: D7FYS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS3_ECTSI) HSP 1 Score: 178 bits (452), Expect = 1.020e-54 Identity = 85/105 (80.95%), Postives = 94/105 (89.52%), Query Frame = 1
Query: 1 GLCSVRVEAYDWSGDVPSAVGAVPFDVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVYDLVDQASHKGFGLFTVCRERPE 315
GLCSVRVEAYDWS +VP +G VPFDVIL TDVAYYEHLYAPF++A LE TAG TL+LLGVTRTDTGPAFFDALD+AGFVY+LVDQASHKGFGLFTV RE+P+
Sbjct: 116 GLCSVRVEAYDWSSEVPEELGEVPFDVILATDVAYYEHLYAPFVQA--LERTAGQHTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVQREQPD 218
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A7R9UE36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE36_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.760e-20 Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 13 VRVEAYDWS-GDVPSAVGAVPFDVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVY------DLVDQASHKGFGLFTVCRE 306
VRVE +DW+ DV G PFDV++GTDVAY+E LY A+A++ T PD +++LGVTR+DTGP+FF L + GF Y D+ + ++ FGLFTV RE
Sbjct: 117 VRVETFDWTVEDVGHLDG--PFDVLIGTDVAYHESLYEDV--ANAIDRTLKPDGVVILGVTRSDTGPSFFRELVKRGFNYHRIRDEDMGGKHTNSSFGLFTVWRE 217
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: W7U3Q4_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q4_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.490e-17 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 13 VRVEAYDWSGDVPS--------AVGAVPFDVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVYDLVDQASHK-------GFGLFTVCR 303
+RV+ ++W D + A+ A+PFDV++GTDVAY + LY P + A L +GP +LILLGVTRTDT P FF L E GF Y L A + GF L +V R
Sbjct: 149 IRVQEFNWLKDKETKNTDSKVKALCALPFDVVVGTDVAYCQELYGPVVHA--LCRLSGPHSLILLGVTRTDTNPRFFQLLQEEGFDYCLTPVADGESSCTVAGGFALLSVVR 258
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A7S2XUY9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUY9_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.950e-17 Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 1 GLCSVRVEAYDWSGDVPSAVGAVPFDVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVY------DLVDQASHKGFGLFTV 297
G C+V VE YDW P PFD I TDVAY+E L+ P ++A L+ + +T+I LGVTR+DTGPAFF L GF Y D ++ FGLF V
Sbjct: 7 GNCNVLVEHYDWGKPCPHL--KPPFDFIFATDVAYFEELHDPLLQA--LDDCSDNNTVIYLGVTRSDTGPAFFKKLHLKGFSYYKIPDEDAGEKYKGSPFGLFLV 107
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A7S1U640_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U640_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 7.160e-17 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 10 SVRVEAYDWS-GDVPSAVGAVPFDVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVYDLVDQASHKG------FGLFTVCR 303
SVRVE +DW+ D +G FDV++GTDVAY+E LY A+A++ T D +++LGVTR DTGP+FF A + GF Y VD++ G F LF R
Sbjct: 132 SVRVEEFDWAKADEVEHLGG-KFDVVVGTDVAYHEDLYDDV--AAAIDATTKDDGVVVLGVTRLDTGPSFFRAFEARGFTYHRVDESLMGGAHTKSSFALFLAWR 233
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A7S0Y816_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y816_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 9.120e-10 Identity = 38/105 (36.19%), Postives = 54/105 (51.43%), Query Frame = 1
Query: 16 RVEAYDWSGDVP-SAVGAVPFDVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVYD-LVDQ-------ASHKGFGLFTVCR 303
R E Y W D PFD+I+G+DVAY ++L+ P I A C T+ L+GVT DT P FF+ L + GF ++ L D S + FG+F + +
Sbjct: 158 RAEEYLWGEDYDFGEKNGEPFDLIIGSDVAYRDYLHDPLIAALDEFCEP-QHTVALIGVTMNDTKPIFFEKLQQRGFRFEKLADHLLGDEFGTSSRQFGVFAISK 261
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A448Z0L1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0L1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.770e-9 Identity = 38/97 (39.18%), Postives = 51/97 (52.58%), Query Frame = 1
Query: 22 EAYDWSGDVPSAVGAVPFDVILGTDVAYYEHLYAPFIRAS---ALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVYDLVDQASHKGFG-LFTVC 300
E YD+ A FD+I+G+DVAY +HL+ P I A + P T+ L+GVT DT P FF+ L AGF Y+ + S + FG F C
Sbjct: 260 EPYDFGTMGDGAPPPSSFDLIVGSDVAYRDHLHDPLIAALDEFSRPAWESPPTVALIGVTMDDTKPVFFEKLXRAGFSYERL---SDRLFGRAFATC 353
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A662WQN6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQN6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.900e-8 Identity = 35/82 (42.68%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 76 DVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVY------DLVDQASHKGFGLFTVCR 303
DVILGTDVAY LY P + L A T++LLG+ RTDT FF L+ GF Y +L ++ + FGLF + R
Sbjct: 183 DVILGTDVAYLRELYDPLLHT--LNRLAMSQTVVLLGLNRTDTDLTFFRQLEHDGFEYYKIPDLELPEEYWGRDFGLFEIRR 262
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: A0A2D4BZQ6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ6_PYTIN) HSP 1 Score: 59.7 bits (143), Expect = 2.050e-8 Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 76 DVILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGF-VYDLVDQA---SHKG--FGLFTVCR 303
D++LGTD+AY Y P + L +TL+L+G+ R+DTG FF L++ GF Y L D+ H+G FGLF + R
Sbjct: 155 DIVLGTDIAYLTEFYEPILHT--LRRITHSETLVLIGLNRSDTGMQFFRRLEQEGFEYYKLSDRQLPREHRGKDFGLFQIRR 234
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Match: K0ST27_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0ST27_THAOC) HSP 1 Score: 51.2 bits (121), Expect = 6.430e-6 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 82 ILGTDVAYYEHLYAPFIRASALECTAGPDTLILLGVTRTDTGPAFFDALDEAGFVYD-----LVD-QASHKGFGLFTV 297
I GTD+AY L+ P I S LE + +T++L+GVT +DT P FFD L ++GF Y+ L+D + + FG+ +
Sbjct: 47 IFGTDLAYRNSLHQPLIE-SLLELSHD-NTVMLIGVTMSDTQPRFFDLLTKSGFRYEKLSDHLLDPEFRGRNFGIIAI 122 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15.3760.1 >prot_H-canaliculatus_F_contig15.3760.1 ID=prot_H-canaliculatus_F_contig15.3760.1|Name=mRNA_H-canaliculatus_F_contig15.3760.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=106bp GLCSVRVEAYDWSGDVPSAVGAVPFDVILGTDVAYYEHLYAPFIRASALEback to top mRNA from alignment at H-canaliculatus_F_contig15:57911..59182- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15.3760.1 ID=mRNA_H-canaliculatus_F_contig15.3760.1|Name=mRNA_H-canaliculatus_F_contig15.3760.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1272bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:57911..59182- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15:57911..59182- >mRNA_H-canaliculatus_F_contig15.3760.1 ID=mRNA_H-canaliculatus_F_contig15.3760.1|Name=mRNA_H-canaliculatus_F_contig15.3760.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=636bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:57911..59182- (Hapterophycus canaliculatus Oshoro5f female)back to top |