mRNA_H-canaliculatus_F_contig15.3759.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig15.3759.1
Unique NamemRNA_H-canaliculatus_F_contig15.3759.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 2.110e-98
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 1 
Query:    4 ADKKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            ADKKTKE+KVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:    2 ADKKTKEDKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: K3YAJ9_SETIT (Uncharacterized protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3YAJ9_SETIT)

HSP 1 Score: 258 bits (658), Expect = 9.390e-86
Identity = 133/148 (89.86%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:   10 KKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            KKT+E K EE VTLGP V EGE VFGVAHIFASFNDTF+HITDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    5 KKTREPK-EENVTLGPAVREGEYVFGVAHIFASFNDTFIHITDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: A0A8C4Q5K9_EPTBU (Ribosomal protein S14 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4Q5K9_EPTBU)

HSP 1 Score: 257 bits (656), Expect = 1.890e-85
Identity = 128/150 (85.33%), Postives = 143/150 (95.33%), Query Frame = 1 
Query:    4 ADKKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            A +K KE+K E+ ++LGP+V EGENVFGVAHIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVAARCKELGITALH+++RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    2 APRKGKEKKEEQMISLGPQVTEGENVFGVAHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHVRLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: A0A7S2HU48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HU48_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.450e-85
Identity = 129/147 (87.76%), Postives = 140/147 (95.24%), Query Frame = 1 
Query:   13 KTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            K  E+ VEE  T+G KVA+GEN+FGVAHIFASFNDTFVH+TDLSGRET+VRVTGGMKVKADRDEASPYAAMLAAQDVAA+CK++GITALHIKMRATGGNKTKTPGPGAQSALRALARAG+KIGRIEDVTPIP+DCTRRK GRRGRRL
Sbjct:   23 KDAEQPVEEMTTIGAKVADGENLFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAAKCKDIGITALHIKMRATGGNKTKTPGPGAQSALRALARAGLKIGRIEDVTPIPSDCTRRKSGRRGRRL 169
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: W1PY91_AMBTC (Uncharacterized protein n=8 Tax=Magnoliopsida TaxID=3398 RepID=W1PY91_AMBTC)

HSP 1 Score: 256 bits (655), Expect = 2.690e-85
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   10 KKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            KKT+E K EE VTLGP V EGE+VFGVAH+FASFNDTFVH+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    5 KKTREPK-EENVTLGPTVREGEHVFGVAHVFASFNDTFVHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 151
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: M1XK24_9METZ (40S ribosomal protein S14 n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XK24_9METZ)

HSP 1 Score: 256 bits (655), Expect = 2.980e-85
Identity = 130/148 (87.84%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:   10 KKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            +K KE K EE + LGP+V EGENVFGVAHIFASFNDTFVHITDLSG+ET+ RVTGGMKVKADRDEASPYAAMLAAQDVA RCKE+GITALHIK+RATGGN+TKTPGPGAQSALRALARAGMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    7 RKGKEAKKEENIVLGPQVGEGENVFGVAHIFASFNDTFVHITDLSGKETITRVTGGMKVKADRDEASPYAAMLAAQDVAVRCKEVGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 154
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: A0A835RMY5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RMY5_VANPL)

HSP 1 Score: 258 bits (658), Expect = 3.640e-85
Identity = 132/148 (89.19%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   10 KKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            +K KE K EE VTLGPKV EGE+VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   45 RKAKETK-EETVTLGPKVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 191
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: A0A804IE59_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Petrosaviidae TaxID=1437197 RepID=A0A804IE59_MUSAM)

HSP 1 Score: 256 bits (654), Expect = 3.820e-85
Identity = 131/148 (88.51%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:   10 KKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            KKT+E K E+ VTLGP V EGE VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    5 KKTREPK-EDNVTLGPAVREGEQVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
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BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: A0A1U8B504_NELNU (40S ribosomal protein S14-like n=10 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1U8B504_NELNU)

HSP 1 Score: 256 bits (653), Expect = 5.240e-85
Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 1 
Query:   34 EERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            EE VTLGP V EGENVFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMK+GRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   11 EENVTLGPTVREGENVFGVAHIFASFNDTFIHVTDLSGRETIVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKVGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Match: A0A1D6LPH1_MAIZE (40S ribosomal protein S14-3 n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6LPH1_MAIZE)

HSP 1 Score: 256 bits (655), Expect = 5.290e-85
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 1 
Query:    1 QADKKTKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 453
            Q+ +KT+E K EE VTLGP V EGE VFGVAHIFASFNDTF+HITDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:   22 QSRRKTREPK-EENVTLGPTVREGEYVFGVAHIFASFNDTFIHITDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS4_ECTSI2.110e-9899.3340S ribosomal protein S14 n=3 Tax=Sar TaxID=269873... [more]
K3YAJ9_SETIT9.390e-8689.86Uncharacterized protein n=7 Tax=Magnoliopsida TaxI... [more]
A0A8C4Q5K9_EPTBU1.890e-8585.33Ribosomal protein S14 n=1 Tax=Eptatretus burgeri T... [more]
A0A7S2HU48_9STRA2.450e-8587.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W1PY91_AMBTC2.690e-8588.51Uncharacterized protein n=8 Tax=Magnoliopsida TaxI... [more]
M1XK24_9METZ2.980e-8587.8440S ribosomal protein S14 n=1 Tax=Sycon ciliatum T... [more]
A0A835RMY5_VANPL3.640e-8589.19Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A804IE59_MUSAM3.820e-8588.51(wild Malaysian banana) hypothetical protein n=2 T... [more]
A0A1U8B504_NELNU5.240e-8590.7140S ribosomal protein S14-like n=10 Tax=Mesangiosp... [more]
A0A1D6LPH1_MAIZE5.290e-8587.4240S ribosomal protein S14-3 n=3 Tax=Zea mays TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15contigH-canaliculatus_F_contig15:54194..56877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.5
Seed ortholog evalue2.4e-47
Seed eggNOG ortholog2880.D7FYS4
Preferred nameRPS14
KEGG rclassRC00002,RC02753
KEGG koko:K01000,ko:K02955
KEGG TC9.B.146
KEGG ReactionR05629,R05630
KEGG Pathwayko00550,ko01100,ko01502,ko03010,map00550,map01100,map01502,map03010
KEGG ModuleM00177
GOsGO:0000028,GO:0000122,GO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030490,GO:0030684,GO:0030686,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034248,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070181,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.mRNA 5'-UTR binding
EggNOG OGsCOG0100@1,KOG0407@2759
EC2.7.8.13
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01011,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein S11
Ec32 orthologEc-19_002330.1
Exons4
Model size546
Cds size300
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15.3759.1prot_H-canaliculatus_F_contig15.3759.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig15 55154..56787 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929241.3895137-UTR-H-canaliculatus_F_contig15:54193..543191622929241.3895137-UTR-H-canaliculatus_F_contig15:54193..54319Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15 54194..54319 +
1696845732.053793-UTR-H-canaliculatus_F_contig15:54193..543191696845732.053793-UTR-H-canaliculatus_F_contig15:54193..54319Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15 54194..54319 +
1622929241.4057424-UTR-H-canaliculatus_F_contig15:55123..551531622929241.4057424-UTR-H-canaliculatus_F_contig15:55123..55153Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15 55124..55153 +
1696845732.0684733-UTR-H-canaliculatus_F_contig15:55123..551531696845732.0684733-UTR-H-canaliculatus_F_contig15:55123..55153Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15 55124..55153 +
1622929241.518989-UTR-H-canaliculatus_F_contig15:56787..568771622929241.518989-UTR-H-canaliculatus_F_contig15:56787..56877Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15 56788..56877 +
1696845732.109076-UTR-H-canaliculatus_F_contig15:56787..568771696845732.109076-UTR-H-canaliculatus_F_contig15:56787..56877Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15 56788..56877 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929241.4236674-CDS-H-canaliculatus_F_contig15:55153..552551622929241.4236674-CDS-H-canaliculatus_F_contig15:55153..55255Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15 55154..55255 +
1696845732.0790956-CDS-H-canaliculatus_F_contig15:55153..552551696845732.0790956-CDS-H-canaliculatus_F_contig15:55153..55255Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15 55154..55255 +
1622929241.4378946-CDS-H-canaliculatus_F_contig15:56150..562671622929241.4378946-CDS-H-canaliculatus_F_contig15:56150..56267Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15 56151..56267 +
1696845732.0905726-CDS-H-canaliculatus_F_contig15:56150..562671696845732.0905726-CDS-H-canaliculatus_F_contig15:56150..56267Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15 56151..56267 +
1622929241.496139-CDS-H-canaliculatus_F_contig15:56706..567871622929241.496139-CDS-H-canaliculatus_F_contig15:56706..56787Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15 56707..56787 +
1696845732.1003983-CDS-H-canaliculatus_F_contig15:56706..567871696845732.1003983-CDS-H-canaliculatus_F_contig15:56706..56787Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15 56707..56787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig15.3759.1

>prot_H-canaliculatus_F_contig15.3759.1 ID=prot_H-canaliculatus_F_contig15.3759.1|Name=mRNA_H-canaliculatus_F_contig15.3759.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=100bp
MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGG
NKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL*
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mRNA from alignment at H-canaliculatus_F_contig15:54194..56877+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig15.3759.1 ID=mRNA_H-canaliculatus_F_contig15.3759.1|Name=mRNA_H-canaliculatus_F_contig15.3759.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2684bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:54194..56877+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGCGGACAAGAAGACGAAGGAGGAGAAGGTGGAGGAGAGGGTAACCCT
TGGCCCTAAGGTGGCGGAGGGAGAGAACGTCTTCGGGGTCGCTCACATCT
TCGCGTCGTTCAACGACACCTTCGTTGTGAGTTGTACTCGACAAGAAAGG
TTGAGGCGGTCAGAAGGAATGTAGAACATGTGTTTCGTTTACCAGGTTTG
TCACACCGAGAATGCCATCTGCCATGGACACCTCTACTTGGAGCACGTCT
AGATCTTGCGCCAGAGACCGGCCGTACCGTTACCATACTCTGAAGATCCT
CGAATGGTGTGCCGCTGCTGCTGTTGCGTGAAGCCTCCGCGAAATACTAC
TACGAAAATCTGCGCTTGTGGCCGTTTTTGCATATTTCGTGTACACGAGT
CTATCGTTCCAATCCACGGTCATGAGTGACCTAGAAAGGTGTTGTGAAAA
AGGGTCCGGCCAAAACGAGGATAGATTGACATGTGGGTGACGCAACGCGT
ACGACCATGATGGTATCATCTATGTACGACGATCGTTTAGCAGTCATCCT
ATTTTAGACTTGAATTGAGCGGCAACACACCATACAGAATAGTTGTCGAT
TTCACGCAGGGAAAAGTAGCGATACGCAGGTAGTTGGATTGCCAATCCTG
TCCTGGCAGTTACCATTTCTACGCGACTCCGTCGTTTCACAGGCAACTTC
TGAACCGCGGTCGATAAACACGTGAACTGCAGCAAAGCAACACCTTCGGT
CCAACCATACACGCTTACACAAGAGTCGCAGCTCCGACGCACGACCGCCC
GTTGGCACCGAATGTCCTCTTTTCCATTGCTGGTGGATCCTCGTTCCTCT
TTCGGTGAGTCTTGCGTACTGATGTGTTACCTGGTACTACTTCCATCGTC
CTCGTGCCCGAAACGTGACTCATCGAGCAGCACATCACCGACCTGTCTGG
GAGGGAAACCATGGTCCGCGTGACCGGCGGCATGAAGGTCAAGGCCGACC
GCGACGAGGCATCCCCTTACGCGGCAATGCTTGCCGCACAGGATGTGGCT
GCCCGCTGCAAGGTGACTATTGAAAGCCTCCTCCTCCGTGCGCCGATGAT
CTTTCGTAGTGTGCTGTACCACTGCAGGACGTCGTCAGACAGACCCGGGG
CGGCCGGTCTCGTGAAAGAAGAAATTGACGACATCCATTCGAGACTGCTG
TACACATGATGCCGCCGTCATGATTTTCGCTCGCGCGTGCCCGATGGAGT
TCCCAAGACAGTACCGTTGTAGTGTCACCGCCGTGCCCCCCATGTGTATG
GTACTCATGTGCTAGAGGGGGGTGGTGGCTGCAGCTGCCGTGGGAGCTCC
GCCAGTCAGTTTGTACGCGCCTAGACGTCACGGCGTGCCACACAAAACGT
GACGTGCCGTCAATGGGTCATTCGTGCTGAGGGTCTTCAGCCAGGCCTGT
CCTGCGTGCTGCTTCTTCCCTCTTTCTTCTTTCTTCTTTCATCCTTCCCG
TTCTCGGGTTGGATGTGTTGGATGTGTTCGATGTGGCAGCACCTTTTTAG
GCAGCCTGCTGATGCTGGATTGTTTCAAATTTGGTCAGCTTTGTGGTTCG
CGCCTTGGCGCGTGTCTCTTTCGTCTCCGGCATTGTATCAATCGAACGTC
GGGGTGACAGCGACAACGTGAAACGTCACCTACTCGTGCTTGTACTTCAA
GAGCGTTGTGATCCTTGCATCGCTAATTGTTGGCACTTTCCTCACCCCAG
ATGCGCTCTCCCATCTGTACGACGTTCCGACGACATCACAGTTTGTGCCA
GAGACCGAGCGTGCTGGAGACACGAATAGGCTAGATTATAAAAAGGACGA
AATCGACCGCGACAGCTGCAGTCACGGCGTGTCCCATGCCTGCTCCCTCT
CACTTGTTCCTCTGCGCTGCTCTCTGCTGCCAACGTGTCTGGTTGCGTCA
TTTGCAGGAACTGGGAATCACCGCCCTGCACATCAAGATGCGCGCAACCG
GCGGCAACAAGACCAAGACTCCCGGCCCCGGCGCACAGTCCGCCCTCCGC
GCTCTCGCTCGTGCAGGCATGAAGGTGAGATGACTTAGTCGTCGATGTGC
GACAGCATCGTTGAACACGTAGTTTTCATATTGGTTCGGTGATGTTTCAC
TGCATTCATGCCTGTTCTGGTGTTTTCTTTTCTGGCGCCCGGGTCATCTG
GTCACGATCATCCCACGAGCTTCTGTGCTCACGTGTCCGGGGCAGTTGCC
CAACGTGTTGCGTCTGATGTTGAAATGACCCGGACCTGATCCAAGGACTG
CTGGCAAAAAGGCAAGACAAGCCGACGCAACAGGCGTAAATGCGCCCCAG
AACTAGGAGACGTCCTCTTAATCCTGCCTCTCTGTAGAAGCACACAGCAT
GCTCGCGACGTGTTAATTTGTGTCAGTCACACGCACGTTTCTGCCTTGCG
TGCTTGACTCAACCCTTTACTCCCGTCCCGGTCATTGTTGCTCCCTGTTG
ACATTCGGTTCAGATCGGCCGCATCGAAGATGTGACCCCGATCCCCACTG
ACTGCACCCGCCGGAAGGGAGGACGCCGCGGACGCCGTCTCTAAGACCAA
ATCCCAACCCGAATCATCGAGAACCGACGGCCTCGCTGTGGTCTTCGGAG
CCTTTGTCAACCGGAGCACGTGCTCAACGACCCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15:54194..56877+

>mRNA_H-canaliculatus_F_contig15.3759.1 ID=mRNA_H-canaliculatus_F_contig15.3759.1|Name=mRNA_H-canaliculatus_F_contig15.3759.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=600bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:54194..56877+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTCCGCGTGACCGGCGGCATGAAGGTCAAGGCCGACCGCGACGAGGC
ATCCCCTTACGCGGCAATGCTTGCCGCACAGGATGTGGCTGCCCGCTGCA
AGATGGTCCGCGTGACCGGCGGCATGAAGGTCAAGGCCGACCGCGACGAG
GCATCCCCTTACGCGGCAATGCTTGCCGCACAGGATGTGGCTGCCCGCTG
CAAGGAACTGGGAATCACCGCCCTGCACATCAAGATGCGCGCAACCGGCG
GCAACAAGACCAAGACTCCCGGCCCCGGCGCACAGTCCGCCCTCCGCGCT
CTCGCTCGTGCAGGCATGAAGGAACTGGGAATCACCGCCCTGCACATCAA
GATGCGCGCAACCGGCGGCAACAAGACCAAGACTCCCGGCCCCGGCGCAC
AGTCCGCCCTCCGCGCTCTCGCTCGTGCAGGCATGAAGATCGGCCGCATC
GAAGATGTGACCCCGATCCCCACTGACTGCACCCGCCGGAAGGGAGGACG
CCGCGGACGCCGTCTCTAAATCGGCCGCATCGAAGATGTGACCCCGATCC
CCACTGACTGCACCCGCCGGAAGGGAGGACGCCGCGGACGCCGTCTCTAA
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