mRNA_H-canaliculatus_F_contig15.3756.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 1.910e-149 Identity = 200/213 (93.90%), Postives = 210/213 (98.59%), Query Frame = 1
Query: 205 MVTIGPKIMAEASPIESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPK 843
MVT+GPK+MA+ SPI+SYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDA+NPPAANLLWLFY+SKVLDFMDTIFIV+KKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLL TGCTSYPPRIV+VYAGYILSLLFLFAQFYVNSY+KKP+ K
Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 213
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 348 bits (892), Expect = 1.170e-117 Identity = 166/256 (64.84%), Postives = 198/256 (77.34%), Query Frame = 1
Query: 70 YREWANGVGDVILDWARNGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIM-AEASP-IESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKK 831
+ +WA IL W G+ + TKGW LTD +AL I GAYL+ V +G + EA P I+ YPV+F+YN+VQ++LCSYM +EA M+A+R GY LPC PF+AKNPP A +L++FY+SK+LDFMDT FI++ K W+QLSFLHVYHH +IFLFYWLN+N GYDGDVYLTIVLNGFIHTVMYTYYFVS+HTKDIWWK LT+ QMIQFV M QA YLL TGC SYPPRIV+ Y YILSLL LFA F+V SY KK
Sbjct: 15 FSQWAGDYEQKILAWVSEGRVHEYTKGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 347 bits (889), Expect = 2.280e-117 Identity = 158/256 (61.72%), Postives = 195/256 (76.17%), Query Frame = 1
Query: 85 NGVGDVILDWARNGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEASPIES--YPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPKK 846
N VG I++WA N + + T W + DF +A+ +V AYL + +G +M P+++ YP RF+YN+VQI+LCSYMC+EA +IA+RN Y +LPC PF+ +NPP N+LWLFYISK+LDF DT+FIV++K W+QLSFLHVYHH TIFLFYWLN+N GYDGD+YLTIVLNGFIHTVMYTYYFVSMHT IWWK LT MQM+QFV M +QALYLL TGCT+YPPR+ Y YI SLL LF F++ SY K KK
Sbjct: 11 NSVGTRIIEWATNDRKAGPTADWPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPKQGGKK 266
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 332 bits (852), Expect = 9.570e-112 Identity = 167/271 (61.62%), Postives = 197/271 (72.69%), Query Frame = 1
Query: 70 YREWANGVGDVILDWAR-NGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEA-SPIESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPKKNA 852
Y E + +G+ IL WA G+ T+GWFLTDFS+A + AY+ V IG +M + ++ YP++F+YNV QI+LC+YM +EAF++AYRNGY LPC D +NPP ANLLWLFYISKV DF DT+FIV+ K WRQLSFLHVYHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTKD IWWK YLTLMQMIQFV M +QA YLL T C R+V VY YILSL FLFAQFYV SY+K PKK A
Sbjct: 4 YVETMDSIGESILSWADPEGKFRGHTEGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK---PKKKA 271
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.630e-110 Identity = 163/271 (60.15%), Postives = 195/271 (71.96%), Query Frame = 1
Query: 61 IDNYREWANGVGDVILDWAR-NGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEA-SPIESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPK 843
++ Y + +G+ IL+WA + Q T+GWFLTDF A +I AY+ V IG +M + ++ YP++F YNV QI+LC+YM +E F++AYRNGY LPC D KNPP ANLLWLFY+SKV DF DTIFIV+ K WRQLSFLHVYHH TIFLFYWLN + +DGD+YLTIVLNGFIHTVMYTYYF+ MHTKD IWWK LTLMQ+IQF+ M +QA YLL TGC R+V VY YILSL FLFAQFYV SY+KKP K
Sbjct: 1 MEAYLNTMDSIGESILNWADPDNQFRGYTEGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKKK 271
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 326 bits (835), Expect = 4.200e-109 Identity = 153/272 (56.25%), Postives = 200/272 (73.53%), Query Frame = 1
Query: 61 IDNYREWANGVGDVILDWARNGQNSD---------ATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEASPIE--SYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPK 843
++ Y+ WA+ VG +L++A N + D T+GWFLTDF++A AI Y +V +G +M ++ +YP+RFVYN++Q++LCSYM +EA ++AYR+ Y ++PC PF +NPP A +LWLFYISKVLDFMDT FIV+ K W QLSFLHVYHH TIF+ YW+NVN GYDGD+YLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQMIQF+ M QA++LL + C ++P ++ +Y YI+SL LF F++ SY S K
Sbjct: 1 MEAYKPWADAVGRQLLNFAANTELFDDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVSPKSKK 272
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A0G4I034_9ALVE (Elongation of fatty acids protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I034_9ALVE) HSP 1 Score: 321 bits (823), Expect = 5.680e-107 Identity = 149/264 (56.44%), Postives = 185/264 (70.08%), Query Frame = 1
Query: 70 YREWANGVGDVILDWARNGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMA----EASPIESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPKKN 849
+ EW IL W G+++ T G+ AA+ +VGAYL V G M+ A +YP RFVYNV Q++LCSYM +EA ++AYRN Y ++PC F+ +NPP ANLLW+FYISK+ DF DTIFI++ K W+QLSFLHVYHH TIF YW+N+ GYDGDVYLTIVLNGFIH VMYTYYF+SMHTKDIWWK LT MQM+QF+CM QA ++L GC YPPR+ +Y YI+SL LFAQF+V +YSKK K+
Sbjct: 27 FSEWCEETSKKILTWIGEGRDTQVTAGYPFATMEAAILVVGAYLAFVFFGSLFMSVFRIPAMERVTYPFRFVYNVAQVMLCSYMTIEAVLLAYRNDYGLVPCVKFNPQNPPVANLLWMFYISKIFDFADTIFIILGKKWQQLSFLHVYHHATIFSIYWVNLRLGYDGDVYLTIVLNGFIHAVMYTYYFLSMHTKDIWWKSKLTSMQMLQFICMNVQASWMLLNGCQQYPPRLTAIYLVYIMSLFLLFAQFFVRTYSKKGGKDKD 290
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A7S2UR25_9STRA (Elongation of fatty acids protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR25_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.020e-106 Identity = 160/273 (58.61%), Postives = 194/273 (71.06%), Query Frame = 1
Query: 61 IDNYREWANGVGDVILDWAR-NGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEASP-IESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTK--------DIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPKKN 849
+D Y + VG+ IL WA + + T GWFLTDF++A+ I Y+V V +G IM P ++ YP++FVYNV QI +C+YM VEAF+IAYR GY LPC FD +NPP A+LL+LFY+SKV DF DTIFIV+ K WRQLSFLHVYHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTK IWWK LT+MQ+IQFV M +QA YLL +GC R+ +Y YILSL FLFAQFY++SYSK K N
Sbjct: 1 MDTYVSTMDAVGESILSWADPDSKFRGYTDGWFLTDFTSAITIAIVYVVFVVVGSAIMKAGVPAMDPYPIKFVYNVSQIFMCAYMTVEAFLIAYRAGYHALPCNNFDTENPPLAHLLYLFYLSKVWDFWDTIFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKVPETGKSLPIWWKSSLTMMQLIQFVSMMSQATYLLVSGCEENTSRVTALYFVYILSLFFLFAQFYISSYSKPKKRKTN 273
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.130e-106 Identity = 152/266 (57.14%), Postives = 188/266 (70.68%), Query Frame = 1
Query: 58 LIDNYREWANGVGDVILDWA--RNGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEASPIESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSK-KPSPKK 846
L+ +Y++ + I WA T+ W L ALAI YL++V +G +M A P++ Y ++F YN+ Q+ LCSYMC+EA + AYRN Y LPC PF+A NPP A LLWLFY+SKV DF DT+FI++ K W QLSFLHVYHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q+IQF+ M QA+YLL GC + P+I +Y GYILSLL LF FY SYS KP+ KK
Sbjct: 5 LLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKK 270
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Match: A0A1E7FWF4_9STRA (Elongation of fatty acids protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWF4_9STRA) HSP 1 Score: 317 bits (813), Expect = 8.020e-106 Identity = 154/272 (56.62%), Postives = 191/272 (70.22%), Query Frame = 1
Query: 61 IDNYREWANGVGDVILDWAR-NGQNSDATKGWFLTDFSAALAIVGAYLVMVTIGPKIMAEASPIESYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAKNPPAANLLWLFYISKVLDFMDTIFIVMKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLATGCTSYPPRIVIVYAGYILSLLFLFAQFYVNSYSKKPSPKKN 849
+D Y+ VGD I+ WA Q + TKGWFLTDF++A +I Y++ V IG ++M I+ YP++F YNV QI+LC+YM +EA ++AYRNGY ++PC ++ +P NLLWLFY+SKV DF DTIFIV+ K WRQLSFLHVYHH TIFLFYWLN N YDGD+YLTI LNGFIHTVMYTYYF+ MHTKD IWWK LTL+Q+ QF+ M +Q LYL+ GC S R+ Y YILSL FLFAQF+V SY + PKK+
Sbjct: 1 MDEYKATLESVGDAIIQWADPESQFTGFTKGWFLTDFTSAFSIALVYVLFVIIGSQVMKVLPAIDPYPIKFFYNVSQIMLCAYMTIEACLLAYRNGYTIMPCVGYNRDDPAIGNLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNANVFYDGDIYLTIALNGFIHTVMYTYYFICMHTKDKKTGKSLPIWWKSSLTLLQLFQFITMMSQGLYLIIFGCESLSIRVTATYVVYILSLFFLFAQFFVASYMQ---PKKS 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15.3756.1 >prot_H-canaliculatus_F_contig15.3756.1 ID=prot_H-canaliculatus_F_contig15.3756.1|Name=mRNA_H-canaliculatus_F_contig15.3756.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp RPRQGQRNPRQTQNRTRMFLIDNYREWANGVGDVILDWARNGQNSDATKGback to top mRNA from alignment at H-canaliculatus_F_contig15:41473..46316+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15.3756.1 ID=mRNA_H-canaliculatus_F_contig15.3756.1|Name=mRNA_H-canaliculatus_F_contig15.3756.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4844bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:41473..46316+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15:41473..46316+ >mRNA_H-canaliculatus_F_contig15.3756.1 ID=mRNA_H-canaliculatus_F_contig15.3756.1|Name=mRNA_H-canaliculatus_F_contig15.3756.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1710bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15:41473..46316+ (Hapterophycus canaliculatus Oshoro5f female)back to top |