mRNA_H-canaliculatus_F_contig14937.3717.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14937.3717.1
Unique NamemRNA_H-canaliculatus_F_contig14937.3717.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: D7G5H6_ECTSI (Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H6_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.560e-56
Identity = 97/103 (94.17%), Postives = 102/103 (99.03%), Query Frame = 1 
Query:   49 SVQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG 357
            +++GVLTAI AAD+IVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLT+NVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG
Sbjct: 1356 ALKGVLTAIQAADLIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTENVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG 1458
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A6H5L9K9_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K9_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 6.580e-56
Identity = 96/103 (93.20%), Postives = 102/103 (99.03%), Query Frame = 1 
Query:   49 SVQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG 357
            +++GVLTAI AAD+IVHRYGMKRFRL+IYGSTTHDVVYCRRCQDAIERLKLT+NVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG
Sbjct: 1553 ALKGVLTAIQAADLIVHRYGMKRFRLLIYGSTTHDVVYCRRCQDAIERLKLTENVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG 1655
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A0L0G7J2_9EUKA (DUF3492 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G7J2_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 8.520e-27
Identity = 58/102 (56.86%), Postives = 71/102 (69.61%), Query Frame = 1 
Query:   52 VQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG 357
            ++ VL AI AA VIVH YG+K ++L++YGS   D +Y   C +AI  L L +N +L G G PA VL QG +F+NSSVSEGLPLAI EA   GL VV TDVGG
Sbjct: 2688 IKDVLNAIEAAAVIVHEYGLKEYKLLVYGSLDSDPLYANECANAIIALNLAENAFLCGLGNPALVLPQGWVFVNSSVSEGLPLAIGEAGLTGLPVVCTDVGG 2789
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A139ARS5_GONPJ (Glycosyltransferase family 4 protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139ARS5_GONPJ)

HSP 1 Score: 105 bits (263), Expect = 3.430e-24
Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 1 
Query:   52 VQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVGG 357
            V+GV  AI AA VIV+  G + F L IYGST  D  Y   C   I  L LT++V+LKG   PA+VL QG +F+NSS++EGLPLA+ EA   GL VV TDVGG
Sbjct:  350 VKGVAGAIAAAGVIVNELGFRNFELHIYGSTEKDSAYTAACTSLISSLNLTNHVFLKGVASPASVLPQGWVFVNSSITEGLPLALGEAGLCGLPVVCTDVGG 451
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A2K3QKE6_9HYPO (Uncharacterized protein n=1 Tax=Tolypocladium capitatum TaxID=45235 RepID=A0A2K3QKE6_9HYPO)

HSP 1 Score: 105 bits (262), Expect = 5.810e-24
Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:   52 VQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVG 354
            ++G+ TAI+AADVIVHRYG K ++LM+YG+      Y       I +  L+DNV L G G+P  VL    +F+NSSVSEGLPLAI EA+ AG+ +VAT+VG
Sbjct: 2568 IKGIKTAILAADVIVHRYGFKDYKLMVYGAKDRQPSYALEMDKLIVKSNLSDNVVLAGFGKPMEVLKDAWLFMNSSVSEGLPLAIGEAALAGVPIVATEVG 2668
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A842YS84_9ARCH (Glycosyltransferase (Fragment) n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A842YS84_9ARCH)

HSP 1 Score: 104 bits (260), Expect = 1.040e-23
Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 1 
Query:   52 VQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVG 354
            ++G+ +AI AADV+V+ +G K ++L IYGS      YC      I   KL++NV+LKG G+PA VL    +F+NSS+SEGLPLAI EA+ AG+ +VAT+VG
Sbjct:  976 IKGIKSAIQAADVLVNHFGFKDYQLHIYGSKDRQPSYCAEMSRMISECKLSENVYLKGFGKPAEVLKDAWLFMNSSISEGLPLAIGEAALAGVPIVATEVG 1076
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A2N3N0G1_9PEZI (DUF3492 domain-containing protein n=1 Tax=Lomentospora prolificans TaxID=41688 RepID=A0A2N3N0G1_9PEZI)

HSP 1 Score: 104 bits (259), Expect = 1.470e-23
Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1 
Query:   19 TKRCTAIRRASVQ---GVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVG 354
            T+R T +  + VQ   G+ +AI AADVIV+RYG K ++L IYGS      YC      I   KL+DNV LKG G+P  VL    +F+NSS+SEGLPLAI EA+ AG+ +VAT+VG
Sbjct: 2543 TERPTVVMLSHVQFIKGIKSAIQAADVIVNRYGFKDYQLWIYGSKDRQPSYCAEMVRLILDCKLSDNVILKGFGKPNEVLKDAWLFMNSSISEGLPLAIGEAALAGVPIVATEVG 2657
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A0B2WK30_METAS (Glycosyl transferase, family 1 n=1 Tax=Metarhizium album (strain ARSEF 1941) TaxID=1081103 RepID=A0A0B2WK30_METAS)

HSP 1 Score: 103 bits (258), Expect = 2.000e-23
Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 1 
Query:   19 TKRCTAIRRASVQ---GVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVG 354
            T R TA+  ++VQ   G+ TAI+AAD+IV+RYG K +RLM+YG+      Y       I +  L+DNV L G G+P  VL    +F+NSS+SEGLPLAI EA+ AG+ +VAT+VG
Sbjct: 2535 TDRPTAVMLSNVQFIKGIKTAILAADIIVNRYGFKDYRLMVYGAKDRQPSYALEMAKLIVKHNLSDNVILAGFGKPKEVLKDAWIFMNSSISEGLPLAIGEAALAGVPIVATEVG 2649
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A084G317_PSEDA (DUF3492 domain-containing protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084G317_PSEDA)

HSP 1 Score: 103 bits (258), Expect = 2.000e-23
Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 1 
Query:   19 TKRCTAIRRASVQ---GVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVG 354
            TK+ T +  + VQ   G+ +AI AADVIV+RYG K ++L +YGS      YC      I   KL DNV LKG G+P  VL    +F+NSS+SEGLPLAI EA+ AG+ +VAT+VG
Sbjct: 2545 TKKPTVVMLSHVQFIKGIKSAIQAADVIVNRYGFKDYQLWVYGSKDRQPSYCAEMVRLIADCKLGDNVVLKGFGKPHEVLKDAWLFMNSSISEGLPLAIGEAALAGVPIVATEVG 2659
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BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Match: A0A2S4L9N8_9HYPO (DUF3492 domain-containing protein n=1 Tax=Tolypocladium paradoxum TaxID=94208 RepID=A0A2S4L9N8_9HYPO)

HSP 1 Score: 103 bits (256), Expect = 3.720e-23
Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:   52 VQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTHDVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPLAIIEASRAGLVVVATDVG 354
            ++G+ TAI+AADVIV+RYG K ++LMIYG+      Y       I +  L+DNV L G G+P  VL    +F+NSSVSEGLPLAI EA+ AG+ +VAT+VG
Sbjct: 2563 IKGIKTAILAADVIVNRYGFKDYKLMIYGAKDRQPSYALEMDKLIVKSNLSDNVVLAGFGKPKEVLKDAWLFMNSSVSEGLPLAIGEAALAGVPIVATEVG 2663
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14937.3717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5H6_ECTSI2.560e-5694.17Glycosyltransferase, family GT4 n=1 Tax=Ectocarpus... [more]
A0A6H5L9K9_9PHAE6.580e-5693.20GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A0L0G7J2_9EUKA8.520e-2756.86DUF3492 domain-containing protein n=1 Tax=Sphaerof... [more]
A0A139ARS5_GONPJ3.430e-2454.90Glycosyltransferase family 4 protein n=1 Tax=Gonap... [more]
A0A2K3QKE6_9HYPO5.810e-2452.48Uncharacterized protein n=1 Tax=Tolypocladium capi... [more]
A0A842YS84_9ARCH1.040e-2350.50Glycosyltransferase (Fragment) n=1 Tax=Candidatus ... [more]
A0A2N3N0G1_9PEZI1.470e-2351.30DUF3492 domain-containing protein n=1 Tax=Lomentos... [more]
A0A0B2WK30_METAS2.000e-2349.57Glycosyl transferase, family 1 n=1 Tax=Metarhizium... [more]
A0A084G317_PSEDA2.000e-2350.43DUF3492 domain-containing protein n=1 Tax=Pseudall... [more]
A0A2S4L9N8_9HYPO3.720e-2352.48DUF3492 domain-containing protein n=1 Tax=Tolypocl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14937contigH-canaliculatus_F_contig14937:216..1187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.0
Seed ortholog evalue2.6e-48
Seed eggNOG ortholog2880.D7G5H6
KEGG koko:K03857
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,map00563,map01100
KEGG ModuleM00065
EggNOG free text desc.phosphatidylinositol N-acetylglucosaminyltransferase activity
EggNOG OGsCOG0438@1,KOG1111@2759
EC2.4.1.198
COG Functional cat.M
CAZyGT4
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categorymitochondrion
Exons2
Model size360
Cds size360
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.8701785-CDS-H-canaliculatus_F_contig14937:215..4581622929235.8701785-CDS-H-canaliculatus_F_contig14937:215..458Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14937 216..458 +
1696845729.1719663-CDS-H-canaliculatus_F_contig14937:215..4581696845729.1719663-CDS-H-canaliculatus_F_contig14937:215..458Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14937 216..458 +
1622929235.8894527-CDS-H-canaliculatus_F_contig14937:1070..11871622929235.8894527-CDS-H-canaliculatus_F_contig14937:1070..1187Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14937 1071..1187 +
1696845729.1832392-CDS-H-canaliculatus_F_contig14937:1070..11871696845729.1832392-CDS-H-canaliculatus_F_contig14937:1070..1187Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14937 1071..1187 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14937.3717.1prot_H-canaliculatus_F_contig14937.3717.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14937 216..1187 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14937.3717.1

>prot_H-canaliculatus_F_contig14937.3717.1 ID=prot_H-canaliculatus_F_contig14937.3717.1|Name=mRNA_H-canaliculatus_F_contig14937.3717.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=120bp
PRGRPATKRCTAIRRASVQGVLTAIMAADVIVHRYGMKRFRLMIYGSTTH
DVVYCRRCQDAIERLKLTDNVWLKGKGRPAAVLAQGDMFLNSSVSEGLPL
AIIEASRAGLVVVATDVGG*
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mRNA from alignment at H-canaliculatus_F_contig14937:216..1187+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14937.3717.1 ID=mRNA_H-canaliculatus_F_contig14937.3717.1|Name=mRNA_H-canaliculatus_F_contig14937.3717.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=972bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14937:216..1187+ (Hapterophycus canaliculatus Oshoro5f female)
CCTCGCGGACGCCCTGCCACAAAACGCTGCACGGCCATCCGCCGCGCTTC
CGTGCAGGGTGTGCTGACGGCGATCATGGCTGCCGACGTCATCGTCCACC
GCTACGGCATGAAGCGGTTCAGGCTCATGATCTACGGGTCCACGACGCAC
GACGTTGTGTACTGCAGGCGGTGCCAGGACGCCATCGAGCGGCTGAAGCT
CACCGACAACGTGTGGCTCAAGGGGAAGGGGAGGCCCGCGGCGGTGAGAG
AAATAATAAGCTTGGTGGGGGGGGGGGTCAGCGGCGCTCGTAGCTGTGCC
AGTCGTGGTCGTCACATCATCCGTGGGTCCTCACGTCTGTGCGCGATACA
CTGAACGATGAACTACGTCCGTGGGGGCCTGTATAAGCGCCTGATGCCAT
CGGGAGCCGCCTGACGGTCGAGGTGGATCCAATCGTGAAGCAAGTTTGTG
TTTTCATTTTCTTGCGTGTTGCGCTCTCGTTCGTCGGTGCGGGCGCTACG
GCTTTGTCTGCCTGCCTGTGTCGCACCTTCCACGGACAGCCGCGTGTACC
GCTGTGCCGCCTCGTACCACGGCCGTCCTGTTCGTCCTGTCCGCGACCAC
CGCAAAACGAGAGCGCGGGGCTTCCAAAAGTAACGCGACCTTCATCGTCC
GGTCGTGCACGCCCGGCTTCGTACGTCCCTAGAGATGAAAGCTGGCGCCC
ACACCAGGCGGAACAAAATCAAGAGACCAGCGAGTGCAACATACCTTTCC
CATTTCGAATCGGCGTCACCCCCTCTTCTTCCTTGTTTTCTCTTTCTGTG
TCGGTGTTGTTGCCGTTTCGTCGATTGTTTCTCGTGACCTTGGTGCCGCC
GTCAGGTTCTAGCCCAGGGGGACATGTTCCTCAACTCGTCCGTGAGCGAG
GGGCTTCCTCTTGCCATCATCGAGGCCAGCCGCGCCGGGCTCGTGGTCGT
GGCTACGGACGTGGGAGGTTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14937:216..1187+

>mRNA_H-canaliculatus_F_contig14937.3717.1 ID=mRNA_H-canaliculatus_F_contig14937.3717.1|Name=mRNA_H-canaliculatus_F_contig14937.3717.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=720bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14937:216..1187+ (Hapterophycus canaliculatus Oshoro5f female)
CCTCGCGGACGCCCTGCCACAAAACGCTGCACGGCCATCCGCCGCGCTTC
CGTGCAGGGTGTGCTGACGGCGATCATGGCTGCCGACGTCATCGTCCACC
GCTACGGCATGAAGCGGTTCAGGCTCATGATCTACGGGTCCACGACGCAC
GACGTTGTGTACTGCAGGCGGTGCCAGGACGCCATCGAGCGGCTGAAGCT
CACCGACAACGTGTGGCTCAAGGGGAAGGGGAGGCCCGCGGCGCCTCGCG
GACGCCCTGCCACAAAACGCTGCACGGCCATCCGCCGCGCTTCCGTGCAG
GGTGTGCTGACGGCGATCATGGCTGCCGACGTCATCGTCCACCGCTACGG
CATGAAGCGGTTCAGGCTCATGATCTACGGGTCCACGACGCACGACGTTG
TGTACTGCAGGCGGTGCCAGGACGCCATCGAGCGGCTGAAGCTCACCGAC
AACGTGTGGCTCAAGGGGAAGGGGAGGCCCGCGGCGGTTCTAGCCCAGGG
GGACATGTTCCTCAACTCGTCCGTGAGCGAGGGGCTTCCTCTTGCCATCA
TCGAGGCCAGCCGCGCCGGGCTCGTGGTCGTGGCTACGGACGTGGGAGGT
TAGGTTCTAGCCCAGGGGGACATGTTCCTCAACTCGTCCGTGAGCGAGGG
GCTTCCTCTTGCCATCATCGAGGCCAGCCGCGCCGGGCTCGTGGTCGTGG
CTACGGACGTGGGAGGTTAG
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