prot_H-canaliculatus_F_contig1485.3673.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1485.3673.1
Unique Nameprot_H-canaliculatus_F_contig1485.3673.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length123
Homology
BLAST of mRNA_H-canaliculatus_F_contig1485.3673.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 5.030e-12
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 0
Query:   32 DEIPGVGLGPVRPICDPSVSECISSDEQVQDDILAELEADEQVTDVRRDIELGELLCDSLDGAEDSELLRFVMSSTETVTAQRTSFTVVGGD 123
            +++  VG+G V PI         S +E+++ +++A LE+D Q T V   I LGELLCDSL+ A DS LLRF +SSTETV A+RTS++ + G+
Sbjct:   43 EDVSDVGVGEVHPIA--------SDEEEIEQELVAALESDPQATVVVH-IGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGN 125          
BLAST of mRNA_H-canaliculatus_F_contig1485.3673.1 vs. uniprot
Match: D8LMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP1_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 5.290e-12
Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 0
Query:   32 DEIPGVGLGPVRPICDPSVSECISSDEQVQDDILAELEADEQVTDVRRDIELGELLCDSLDGAEDSELLRFVMSSTETVTAQRTSFTVVGG 122
            +++   G+G V PI +         + QV+++++  LE DE +T V  DIELG+LLCDSL+ A DS LLRF +SSTETV A+RTS++ + G
Sbjct:   45 EDVKDTGVGHVHPIPE--------DEHQVEEELVEVLETDE-LTTVVGDIELGDLLCDSLEDASDSSLLRFTISSTETVIAERTSYSSIDG 126          
BLAST of mRNA_H-canaliculatus_F_contig1485.3673.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 6.570e-10
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0
Query:   59 QVQDDILAELEADEQVTDVRRDIELGELLCDSLDGAEDSELLRFVMSSTETVTAQRTSFTVVGGD 123
            QV++ ++  LE DE +T V  DIELG+LLCDSL+ A DS LLRF +SSTETV A+RTS++ + G+
Sbjct:  150 QVEEGLVEVLETDE-LTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGN 213          
BLAST of mRNA_H-canaliculatus_F_contig1485.3673.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 3.850e-9
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   60 VQDDILAELEADEQVTDVRRDIELGELLCDSLDGAEDSELLRFVMSSTETVTAQRTSFTVVGGD 123
            V+ ++   LE DEQVT V  +++LGELLCDSL  AED+ LL+F +S+ ET+ A RTS+TVV G+
Sbjct:  146 VEKELAETLEVDEQVT-VLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGE 208          
BLAST of mRNA_H-canaliculatus_F_contig1485.3673.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 8.120e-8
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:   80 DIELGELLCDSLDGAEDSELLRFVMSSTETVTAQRTSFTVVGG 122
            DIELGELLCDSL+ A DS LLRF +SSTETV A+RTS++ + G
Sbjct:   12 DIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDG 54          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1485.3673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLU0_ECTSI5.030e-1246.74PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
D8LMP1_ECTSI5.290e-1246.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF50_9PHAE6.570e-1056.92LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LCP8_ECTSI3.850e-954.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTV1_ECTSI8.120e-869.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..123
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1485contigH-canaliculatus_F_contig1485:15587..25620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1485.3673.1mRNA_H-canaliculatus_F_contig1485.3673.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1485 15587..25629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1485.3673.1 ID=prot_H-canaliculatus_F_contig1485.3673.1|Name=mRNA_H-canaliculatus_F_contig1485.3673.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=123bp
MTPTRGSILGMVLVAVTSLPWGDIPVTFVVGDEIPGVGLGPVRPICDPSV
SECISSDEQVQDDILAELEADEQVTDVRRDIELGELLCDSLDGAEDSELL
RFVMSSTETVTAQRTSFTVVGGD
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