mRNA_H-canaliculatus_F_contig14800.3644.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI) HSP 1 Score: 236 bits (602), Expect = 2.000e-70 Identity = 130/153 (84.97%), Postives = 142/153 (92.81%), Query Frame = 1
Query: 1 VFVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFGV 459
VF FTEQYLVI DELL SFGLAL+AVLILSLFVLGK+ +V LVC T++IIDVEL GFVYHW+L+VNSITVI ELIMAVGLVVDYMVH+VHYFLHQD +IPKD RIA+ALGEIGPS++VGAATTFLGIMPLAFANNVIFRVFFKMFL IISFGV
Sbjct: 682 VFGFTEQYLVIYDELLASFGLALLAVLILSLFVLGKVAIVVLVCVTLVIIDVELLGFVYHWNLNVNSITVI-ELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIADALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFGV 833
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.790e-69 Identity = 127/152 (83.55%), Postives = 143/152 (94.08%), Query Frame = 1
Query: 1 VFVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
VF+F+EQY+VI +ELL+SFGLAL+AVL+LSLFVLGK+TVV LVC T++IIDVEL GFVYHW+LDVNSITVI ELIMAVGLVV+YMVH+VHYFLHQD +IPKD RIA ALGEIGPS++VGAATTFLGIMPLAFANNVIFRVFFKMFL IISFG
Sbjct: 759 VFLFSEQYVVIYNELLSSFGLALLAVLVLSLFVLGKVTVVLLVCVTLIIIDVELLGFVYHWNLDVNSITVI-ELIMAVGLVVEYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 909
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI) HSP 1 Score: 233 bits (594), Expect = 7.030e-69 Identity = 126/152 (82.89%), Postives = 141/152 (92.76%), Query Frame = 1
Query: 1 VFVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
VFVF+EQ++VI +ELL+SFGLAL+AVL LSLFVLGK+T+V LVC T+++IDVEL GFVYHW+LDVNSITVI ELIMAVGLVVDYMVH+VHYFLHQD IPKD RIA ALGEIGPS++VGAATTFLGIMPLAFANNVIFRVFFKMFL IISFG
Sbjct: 731 VFVFSEQFVVIYNELLSSFGLALLAVLALSLFVLGKVTIVLLVCLTLVVIDVELLGFVYHWNLDVNSITVI-ELIMAVGLVVDYMVHIVHYFLHQDPRIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 881
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.220e-62 Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 1
Query: 1 VFVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
VFVF+EQ++VI +ELL+SFGLAL+AVL LSLFVLGK+ +IDVEL GFVYHW+LDVNSITVI ELIMAVGLVVDYMVH+VHYFLHQD +IPKD RIA ALGEIGPS++VGAATTFLGIMPLAFANNVIFRVFFKMFL IISFG
Sbjct: 598 VFVFSEQFVVIYNELLSSFGLALLAVLALSLFVLGKV-----------MIDVELLGFVYHWNLDVNSITVI-ELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 737
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.910e-61 Identity = 115/151 (76.16%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 4 FVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
F+F EQYL I +ELL+SFGLAL+AVL+LSLFVLGK+ IIDVEL GFVYHW+LD+N IT I ELIMAVGLVVDYMVH+VHYFLHQD +IPKD RIA ALGEIGPS++ GAATTFLGIMPLAFANNVIFRVFF MFL IISFG
Sbjct: 365 FLFAEQYLAIYNELLSSFGLALLAVLVLSLFVLGKV-----------IIDVELLGFVYHWNLDMNGITAI-ELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMAGAATTFLGIMPLAFANNVIFRVFFNMFLVIISFG 503
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI) HSP 1 Score: 205 bits (521), Expect = 5.680e-59 Identity = 115/152 (75.66%), Postives = 130/152 (85.53%), Query Frame = 1
Query: 1 VFVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
VFV +EQ++VI EL++SFGLAL AV LSL VLGK+ VV LVC T++I+D EL GFVY + LDVNSITVI +LIMAVGLVVDYMVHLVHYFLHQD PKD RIA+ALGEIGPS+L+GA TTFLGIMPL FA+NVIFRVFFKMFL IISFG
Sbjct: 621 VFVSSEQFVVIYGELMSSFGLALAAVFALSLLVLGKVAVVVLVCVTLVIVDAELLGFVYLYGLDVNSITVI-QLIMAVGLVVDYMVHLVHYFLHQDPRTPKDTRIADALGEIGPSLLMGAGTTFLGIMPLVFAHNVIFRVFFKMFLVIISFG 771
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI) HSP 1 Score: 202 bits (514), Expect = 7.960e-58 Identity = 110/152 (72.37%), Postives = 130/152 (85.53%), Query Frame = 1
Query: 4 FVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFGV 459
FVF+EQ+LVI DEL+ +F +ALVAV + S+F+LG+ ++ LVCFT++IIDVEL GFVYHW LDVNS+TVI ELIMAVGLVVDYMVH+VHYFLHQD KD RIA+ LGEIGPS++VGAATTFLGI P+AFA N +FRVFFKMFL II FGV
Sbjct: 700 FVFSEQFLVIYDELMMNFVMALVAVAVFSVFILGRWKIIALVCFTLVIIDVELLGFVYHWRLDVNSLTVI-ELIMAVGLVVDYMVHIVHYFLHQDPDRDKDVRIADGLGEIGPSVVVGAATTFLGITPMAFAANHVFRVFFKMFLIIIGFGV 850
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI) HSP 1 Score: 178 bits (452), Expect = 3.220e-49 Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 1
Query: 145 IIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
IIDVEL GFVYHW+LDVNSITVI ELIMAVGLVVDYMVH+VHYFLHQD +IPKD RIA ALGEIGPS++VGAATTFLGIMPLAFANNVIFRVFFKMFL IISFG
Sbjct: 709 IIDVELLGFVYHWNLDVNSITVI-ELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFANNVIFRVFFKMFLVIISFG 811
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: D7FY96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY96_ECTSI) HSP 1 Score: 159 bits (401), Expect = 6.400e-47 Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 1
Query: 145 IIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFGV 459
IIDVEL G VYHW+LDV IT I ELI A+GLVVDY+VH+VH+FLHQD +IPKD RIA ALGEIGPS++VGAATTFLGI+PLAFAN IFRVFFKMFL IISFGV
Sbjct: 58 IIDVELLGSVYHWNLDVKGITAI-ELITALGLVVDYIVHIVHFFLHQDPSIPKDARIAEALGEIGPSVMVGAATTFLGIIPLAFANTFIFRVFFKMFLVIISFGV 161
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Match: A0A7S2WB03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB03_9STRA) HSP 1 Score: 136 bits (343), Expect = 3.740e-36 Identity = 78/147 (53.06%), Postives = 105/147 (71.43%), Query Frame = 1
Query: 16 EQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIDVELFGFVYHWDLDVNSITVIAELIMAVGLVVDYMVHLVHYFLHQDSTIPKDNRIANALGEIGPSILVGAATTFLGIMPLAFANNVIFRVFFKMFLCIISFG 456
E LV+ +EL + ALVAV I+SL +L + T V LV + +IDVE+ G +Y W L+VN++TV+ +L+MAVGLVVDY H++HY+L Q R+ +AL EIGPS+L+G TTFLG+MPLAFA +VIFR FF+MFL II +G
Sbjct: 152 ETELVLPEELTLNLAFALVAVTIVSLLILVRPTAVLLVSMIICVIDVEIIGTMYFWGLNVNTVTVV-QLVMAVGLVVDYTAHILHYYLQQPFHKEPMERLRDALVEIGPSVLLGCFTTFLGVMPLAFAQSVIFRTFFRMFLSIIVYG 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14800.3644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14800.3644.1 >prot_H-canaliculatus_F_contig14800.3644.1 ID=prot_H-canaliculatus_F_contig14800.3644.1|Name=mRNA_H-canaliculatus_F_contig14800.3644.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=153bp VFVFTEQYLVIIDELLTSFGLALVAVLILSLFVLGKITVVFLVCFTVLIIback to top mRNA from alignment at H-canaliculatus_F_contig14800:173..1846+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14800.3644.1 ID=mRNA_H-canaliculatus_F_contig14800.3644.1|Name=mRNA_H-canaliculatus_F_contig14800.3644.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1674bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14800:173..1846+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14800:173..1846+ >mRNA_H-canaliculatus_F_contig14800.3644.1 ID=mRNA_H-canaliculatus_F_contig14800.3644.1|Name=mRNA_H-canaliculatus_F_contig14800.3644.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=918bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14800:173..1846+ (Hapterophycus canaliculatus Oshoro5f female)back to top |