mRNA_H-canaliculatus_F_contig1477.3624.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5KWM8_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM8_9PHAE) HSP 1 Score: 196 bits (497), Expect = 3.100e-56 Identity = 98/146 (67.12%), Postives = 113/146 (77.40%), Query Frame = 2
Query: 2 NYSPAFTSAEDKTNLMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRDFFQPIKLEL 439
N S +F + KT+++R FR AAYAATPE FAT A L+ LV G +CE YM LI NKTKW FC RPTV T+GMVATQRTEGLFGVAKR+GV KK+SLCALWDRLQ + M+ E+ARLAT I PGVAFRDKHV +FFQP+K EL
Sbjct: 315 NCSSSFPDNDAKTDMLRTFRRAAYAATPEAFATQAARLKTLVAGKKCEDYMTDLITNKTKWAFCWRPTVVTLGMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHVSKMIAIETARLATPLITPGVAFRDKHVEEFFQPVKQEL 460
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.030e-53 Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 2
Query: 2 NYSPAFTSAEDKTNLMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRDFFQPIKLEL 439
N S +F +DKT++M+ FR+ AYAATPE F T A LEQLV G +CE Y+ LIKNKTKW FCCRPTV T+GMVATQRTEGLFGVAK +GV KK+SLCALWDRLQR+ M+ E+ARLAT + GVAF D HV +FF+P+K EL
Sbjct: 700 NCSSSFAYNDDKTDMMQCFRNEAYAATPEVFGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKSSGVEKKLSLCALWDRLQRLSKMIAIETARLATPPLGAGVAFGDIHVENFFRPVKQEL 845
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.280e-50 Identity = 84/146 (57.53%), Postives = 112/146 (76.71%), Query Frame = 2
Query: 2 NYSPAFTSAEDKTNLMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRDFFQPIKLEL 439
N S +F E++ ++RLFRSAAYAATPE FA YR +LE++V+G +CE+YMD LI++KTKW F CRPT+ TMGMVATQRTEG+FGVAKR+GV KK+SLC LW++LQ M +D E +R+AT + + F+ KH++ F PI+ EL
Sbjct: 79 NCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKIVKGKKCEEYMDALIQDKTKWAFSCRPTLLTMGMVATQRTEGMFGVAKRSGVHKKLSLCGLWEKLQLMYQKMDVEYSRVATRGVGAELPFQTKHLQGIFAPIQEEL 224
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5JBV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV0_9PHAE) HSP 1 Score: 171 bits (433), Expect = 2.550e-47 Identity = 82/116 (70.69%), Postives = 92/116 (79.31%), Query Frame = 2
Query: 92 FATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRDFFQPIKLEL 439
FAT A +E LV G +CE YM LI NKTKW FCCRPTV T+GMVATQRTEGLFGVAKR+GV KK+SLCALWDRLQ + M+ E+ARL T I PGVAFRDKHV +FFQP+K EL
Sbjct: 259 FATQAARMETLVAGKKCEGYMTDLITNKTKWTFCCRPTVLTLGMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHLSKMIAIETARLETPPITPGVAFRDKHVEEFFQPVKQEL 374
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5JXC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC0_9PHAE) HSP 1 Score: 168 bits (426), Expect = 5.820e-47 Identity = 82/116 (70.69%), Postives = 92/116 (79.31%), Query Frame = 2
Query: 92 FATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRDFFQPIKLEL 439
F+T A LE LV G +CE YM LI NKTKW FCCRPTV T+GMVATQRTEGLFGVAKR+GV KK+SLCALWDRLQ + M+ E+ARLAT I PGVAFRDK V +FFQP+K EL
Sbjct: 102 FSTQAARLETLVAGKKCEGYMTDLITNKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHLSKMIAIETARLATPPITPGVAFRDKLVEEFFQPVKQEL 217
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: D7G4F0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F0_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.400e-42 Identity = 76/112 (67.86%), Postives = 90/112 (80.36%), Query Frame = 2
Query: 2 NYSPAFTSAEDKTNLMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LML 337
N+S + + +DKT++MR FR+AA AATPE FAT A LEQLV G +CE Y+ LIKNK KW FCCRP V T+GMVATQRTEGLFGVAKR+GV KK+SLCALWDRLQR+ M+
Sbjct: 302 NFSSSSANNDDKTDMMRCFRNAADAATPEVFATQVARLEQLVAGKKCEGYIADLIKNKAKWAFCCRPAVLTLGMVATQRTEGLFGVAKRSGVDKKLSLCALWDRLQRLSKMI 413
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5JYU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU5_9PHAE) HSP 1 Score: 154 bits (388), Expect = 6.070e-42 Identity = 70/123 (56.91%), Postives = 96/123 (78.05%), Query Frame = 2
Query: 44 LMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRD 412
++RLFR+A YAATP+ FATYRA+LE+ V+G +C++YM L++ KTKW F CRPT T+GMVATQRTEG+FGVAK++G+ K +SLCALWDRLQ + +D E R+A+ A+ +AF KH+ +
Sbjct: 1 MLRLFRNAEYAATPKAFATYRADLERTVKGKKCDEYMRDLLEEKTKWAFSCRPTALTLGMVATQRTEGMFGVAKKSGIHKNLSLCALWDRLQHVYQTMDIEHGRVASPAVKLELAFPTKHLEE 123
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.520e-41 Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 2
Query: 2 NYSPAFTSAEDKTNLMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESAR 355
N S +F + +DKT++MR F++AA+AATPE F T A LE LV G +CE Y+ LIKNKTKW F CRPTV T+GMVATQRT GLFGVAKR+GV KK+SLCALWDRLQR+ M+ E+AR
Sbjct: 994 NCSSSFANNDDKTDMMRCFKNAAFAATPEVFGTQVARLEHLVAGKKCEAYIADLIKNKTKWAFYCRPTVLTLGMVATQRTGGLFGVAKRSGVEKKLSLCALWDRLQRLSKMIAIETAR 1111
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5KWR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR3_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.110e-37 Identity = 66/119 (55.46%), Postives = 89/119 (74.79%), Query Frame = 2
Query: 8 SPAFTSAEDKTNLMRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLAT 364
S +F+ + + ++RLFR+AAYAATPETFA YRA+LE+ V G +C++Y+ L++ KTKW F CR T T+GM ATQRTEG+FGVAK++G+ K +SLCALWDRLQ + +D E R T
Sbjct: 37 SSSFSDMKTREKMLRLFRNAAYAATPETFAAYRADLERTVNGKKCDQYIRDLLEEKTKWAFSCRLTALTLGMFATQRTEGMFGVAKKSGIHKNLSLCALWDRLQHVYQTVDIEHGREKT 155
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Match: A0A6H5KC96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC96_9PHAE) HSP 1 Score: 124 bits (311), Expect = 4.030e-31 Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 2
Query: 86 ETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCRPTVRTMGMVATQRTEGLFGVAKRAGVVKKVSLCALWDRLQRM*LMLDTESARLATLAIAPGVAFRDKHVRDFFQPI 427
+ FA+ R ++EQ+ GT+CE+Y+D L KNK+KW F CR T +GM ATQR EGLF V K GV+K++SLCALWD L+R+ L E LAT AIA + F++KH+ +FF PI
Sbjct: 121 QAFASSRGQMEQISAGTKCEEYVDNLFKNKSKWAFYCRTTTLALGMAATQRVEGLFSVPKCMGVIKQLSLCALWDVLRRVDTSLAIE---LATPAIAAQLPFQEKHMENFFTPI 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1477.3624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1477.3624.1 >prot_H-canaliculatus_F_contig1477.3624.1 ID=prot_H-canaliculatus_F_contig1477.3624.1|Name=mRNA_H-canaliculatus_F_contig1477.3624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=94bp MRLFRSAAYAATPETFATYRAELEQLVEGTECEKYMDGLIKNKTKWVFCCback to top mRNA from alignment at H-canaliculatus_F_contig1477:5604..6641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1477.3624.1 ID=mRNA_H-canaliculatus_F_contig1477.3624.1|Name=mRNA_H-canaliculatus_F_contig1477.3624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1038bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1477:5604..6641- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1477:5604..6641- >mRNA_H-canaliculatus_F_contig1477.3624.1 ID=mRNA_H-canaliculatus_F_contig1477.3624.1|Name=mRNA_H-canaliculatus_F_contig1477.3624.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=564bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1477:5604..6641- (Hapterophycus canaliculatus Oshoro5f female)back to top |