mRNA_H-canaliculatus_F_contig14722.3605.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LQD9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD9_ECTSI) HSP 1 Score: 275 bits (704), Expect = 1.860e-86 Identity = 146/303 (48.18%), Postives = 194/303 (64.03%), Query Frame = 1
Query: 1 WRKRELSLVDDAVLRLCKVQRGRTTD-SCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLL-EGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREETPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
W+ +LSLV + LRLC +RG SC+E+ LD SEVV L + + + + R FRV + GK WTLDA + E+ AW+S+L E +I++ AG E N D Q+ ++V G P +S P FRG ++ +YPL GQFLST P VD+ N+E+ GD+ILR GD PA SG + +WA+RATGS G +A+GGLGCV++SWW + ++ PVH+ VKNGRWRVGRG LCTMG+SPKP GSWR +LPWDA+GRAIK A LE+RD LV+ + Q E+ WSS+ P
Sbjct: 157 WQPGDLSLVAGSALRLCHTKRGFANHASCKEQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTKWTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLD-GAPLAQNLGDSSVTSSKLGPDTPEVS-PAFRGQSMAPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGDIPAFSGDKSPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTYDDIPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGEILWSSASPP 457
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LQD2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD2_ECTSI) HSP 1 Score: 270 bits (690), Expect = 3.660e-86 Identity = 146/304 (48.03%), Postives = 195/304 (64.14%), Query Frame = 1
Query: 1 WRKRELSLVDDAVLRLCKVQRGRTTD-SCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLL-EGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTL-SSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREETPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
W+ +LSLV +VLRLC +RG SC+E+ LD SEVV L + + + + R FRV + GK WTLDA + E+ AW+S+L E +I++ AG E N D Q+ ++V ++P T +SP FRG +S +YPL GQFLST VD+ N+E+ GD+I+R GD PA SG + +WA+RATGS G +A+GGLGCV++SWW + ++ PVH+ VKNGRWRVGRG LCTMG+SPKP GSWR +LPWDA+GRAIK A LE+RD LV+ + Q E WSS+ P
Sbjct: 17 WQPGDLSLVAGSVLRLCHTKRGFANHASCKEQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTKWTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLD-GAPLAQNLGDSSVTSSK--LEPDTPDASPAFRGHVMSPGDYPLQTGQFLSTASLVDSTNVEITEIGDVIVRAGDIPAFSGDKPPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTDDDIPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGETLWSSASPP 317
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE) HSP 1 Score: 278 bits (710), Expect = 1.150e-85 Identity = 139/302 (46.03%), Postives = 190/302 (62.91%), Query Frame = 1
Query: 1 WRKRELSLVDDAVLRLCKVQRGRTTDSCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLLEGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREE-TPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
WR R+LSLVD + LRLCK+ R SC++ LD +EVV + D +G KD R FRV+T G W LDAG ++ W+S+LEGV ++ D +++K ++ P +P FRG +S +YPL GQFLST P VD+ N+E+ GDLILR+GD PA + +WAHR TGS+GG ANGGLGC V++WWE + ++ PVH+ VKNGRWRVGRG +CT+G+SP+P G WR HLPWD+ G+A+KAASL++R+ ++V+A+ + WSSSPSP
Sbjct: 319 WRPRQLSLVDSSTLRLCKMARVGGAKSCQDMPLDSSTEVVRVEDKHGTTSKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSVLEGVTTRDTQKETDFFGDTPRAGDLGNSFKFSMELGPFTFAP----TPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLELTEVGDLILRQGDIPAYPTDDTPLWAHRVTGSVGGTANGGLGCAVEAWWERATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGQSPRPVGGWRVHLPWDSHGKALKAASLQLRNGSVVMATEDGHILWSSSPSP 616
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI) HSP 1 Score: 275 bits (702), Expect = 2.490e-82 Identity = 141/302 (46.69%), Postives = 190/302 (62.91%), Query Frame = 1
Query: 1 WRKRELSLVDDAVLRLCKVQRGRTTDSCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLLEGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREE-TPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
WR R+L+LVD + L+LCK+ RG SC++ LD +EVV + +G+ RKD R FRV+T G W LDAG ++ +S+LEGV + V AD D++K ++ P +P FRG +S +YPL GQFLST P V++ N+EV GDLILR+GD PA + +WAHR TGS+G ANGGLGC V++WWE + + PVH+ VKNGRWRVGRG +CT+GRSP+ AG WR HLPWD+ G+A+KAASL++RD ++V+A+ + WSSSPSP
Sbjct: 569 WRPRQLTLVDASTLKLCKMARGGGVKSCQDMPLDSSTEVVRVESKHGRPRKDGRFVFRVSTGIPRGLTNKRWELDAGSSADLDTLMSVLEGVTTPDFEKEADVFADTPRAGDLGDSFKFSMELGPFTFAP----TPAFRGDSISIDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTANGGLGCAVEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQVRDGSVVMATEDGHILWSSSPSP 866
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LK90_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK90_ECTSI) HSP 1 Score: 251 bits (641), Expect = 6.690e-79 Identity = 134/303 (44.22%), Postives = 181/303 (59.74%), Query Frame = 1
Query: 1 WRKRELSLVDDAVLRLCKVQRGRTTDSCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLLEGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWE--TVGSDAREETPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
W+ R+LSLVD VL+LCK+ R SC+ ++VV + +G+ RKD R FRV+T G L+AG + W+S+LEGV ++ + D P D++K ++ P +P FRG +S +YPL GQ LST P VD+ N+EV GDL+LRRGD PA +WAHR TGS+GG AN LGC ++ WW T G + PVH+VVKNGRWRVGRG +CT+GR P AG WR HLPWD+ G+ +KAA L++ D ++V+A+G+ +V WSSSPSP
Sbjct: 25 WKPRQLSLVDGFVLKLCKMTRAGQEKSCQ------FNQVVRVEGKHGRPRKDGRFVFRVSTGTPRGLKNKARELNAGSSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAP----TPAFRGDSISVDDYPLIPGQILSTAPVVDSANLEVTEVGDLVLRRGDIPAYPSDHKPLWAHRVTGSVGGTANWRLGCALEVWWHRATNGGEGMG-VPVHLVVKNGRWRVGRGWMCTLGRIPSVAGGWRVHLPWDSHGKTLKAALLQLCDGSVVMATGEGDVAWSSSPSP 316
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LK83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK83_ECTSI) HSP 1 Score: 243 bits (620), Expect = 3.190e-76 Identity = 124/282 (43.97%), Postives = 168/282 (59.57%), Query Frame = 1
Query: 61 RGRTTDSCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLLEGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREE-TPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
R SC++ LD +EV + +G+ RKD R FRV+T G W LDAG + W+S+LEGV ++ + D P D++K ++ P +P FRG +S +YPL GQFLST P V++ N+EV GDLILR+GD PA +WAHR TGS+GG AN LGC ++ WW+ + + PVH+ VKNGRWRVGRG +CT+GRSP+ AG WR HLPWD+ G+A+KAASL++ D + V+A+ + WSSSPSP
Sbjct: 3 RAGQEKSCQDMPLDSSTEVARVEGKHGRPRKDGRFVFRVSTGTPRGLKNKAWELDAGSSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAP----TPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTDHKPLWAHRVTGSVGGTANWRLGCALEVWWDRATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLCDGSAVMATEDGHILWSSSPSP 280
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 245 bits (625), Expect = 7.250e-70 Identity = 126/279 (45.16%), Postives = 171/279 (61.29%), Query Frame = 1
Query: 1 WRKRELSLVDDAVLRLCKVQRGRTTDSCEERSLDHLSEVVALPDMNGKQRKDARHPFRVTTSASGGKITHVWTLDAGGEEEMTAWISLLEGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREE-TPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLE 834
WR R+L+LVD + L+LCK+ RG SC++ LD +EVV + +G+ RKD R FRV+T G W LDAG ++ +S+LEGV ++ D D++K + P +P FRG +S +YPL GQFLST P V++ N+EV GDLILR+GD PA + +WAHR TGS+G A+GGLGC +++WWE + + PVH+ VKNGRWRVGRG +CT+GRSP+ AG WR HLPWD+ G+A+KAASL+
Sbjct: 1615 WRPRQLTLVDASTLKLCKMARGGGVKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGVPRGLTNKRWELDAGSSADLDKRMSVLEGVTTRDFEKEADFFWDTPRAGDLGDSFKFSTELGPFTFAP----TPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTASGGLGCALEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ 1889
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: A0A6H5JC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC81_9PHAE) HSP 1 Score: 224 bits (572), Expect = 5.560e-69 Identity = 116/233 (49.79%), Postives = 146/233 (62.66%), Query Frame = 1
Query: 214 WTLDAGGEEEMTAWISLLEGVISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETV---GSDAREETPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
W DAG + AWISLLEGV + D P D++K ++ P +P FRG +S +YPL GQFLST P VD+ N+EV GD+ILR+GD PA +WAHRATGS+GG A GGLGC V++WWE G D R PVH+ VKNGRWRVGRG +CT+GRSP+ AG WR HLPWD+ G+A+KAASL++RD + V+A+ + WSSS SP
Sbjct: 54 WDFDAGSSLALDAWISLLEGVTTLDYQKEADFWGDTPRAGNPGDSFKFSIELGPFTFAP----TPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEVGDVILRQGDIPAYPTNPKPLWAHRATGSVGGTAKGGLGCAVEAWWERATNGGQDMR--VPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSSSP 280
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: A0A6H5KXU4_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU4_9PHAE) HSP 1 Score: 218 bits (556), Expect = 3.860e-67 Identity = 114/228 (50.00%), Postives = 151/228 (66.23%), Query Frame = 1
Query: 214 WTLDAGGEEEMTAWISLLEG-VISKQKAGSEGVNADDVSVKTPQDAYKAAVREDAGGIKPPTLSSPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREETPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSS 891
WTLDA + E+ AW+S+L G +I++ G E N D Q+ ++V G P +SP FRG +S +YPL GQFLST P VD+ N+E+ GD+ILR G +PA SG + +WA+RATGS G +A+GGLGCV +SWW + E+ VH+ VKNGRWRVGRG LCTMG+SP+P GSWR +LPWDA+G+AIK A LE+RD LV+ + E+ WSS+
Sbjct: 3 WTLDAESQSELDAWVSILTGAIIAQGPTGDEETNRFD-GAPLAQNLGDSSVTSSNLGSDTPD-ASPAFRGHVISPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGGFPAFSGDKPPLWAYRATGSTGDKADGGLGCVFESWWRRMVKGTDED--VHLYVKNGRWRVGRGRLCTMGQSPRPHGSWRANLPWDAQGQAIKTAGLELRDRALVLVTPHGEILWSSA 226
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Match: D8LKF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF0_ECTSI) HSP 1 Score: 168 bits (425), Expect = 1.370e-47 Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 403 SPGFRGFKLSTKEYPLHAGQFLSTFPSVDAHNMEVRGNGDLILRRGDYPAPSGGEGLIWAHRATGSIGGRANGGLGCVVQSWWETVGSDAREE-TPVHVVVKNGRWRVGRGALCTMGRSPKPAGSWRTHLPWDARGRAIKAASLEIRDDTLVVASGQ-EVFWSSSPSP 900
+P FRG +S +YPL GQFLS P V++ N+EV DLILR+GD PA G L G G NGGLGC V++WWE + + PVH+ KNGRWRVGRG +CT+GRSP+ AG W+ HLPWD+ G+A+KAASL++ D ++V+++ + WSSSPSP
Sbjct: 61 TPTFRGNSISVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHTLGTPRYGVGR-GYSTNGGLGCAVEAWWERATNGGEDMGVPVHLAEKNGRWRVGRGWMCTLGRSPRVAGGWKVHLPWDSHGKALKAASLQLGDGSVVMSTEDGHILWSSSPSP 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14722.3605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14722.3605.1 >prot_H-canaliculatus_F_contig14722.3605.1 ID=prot_H-canaliculatus_F_contig14722.3605.1|Name=mRNA_H-canaliculatus_F_contig14722.3605.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=301bp WRKRELSLVDDAVLRLCKVQRGRTTDSCEERSLDHLSEVVALPDMNGKQRback to top mRNA from alignment at H-canaliculatus_F_contig14722:16..2521+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14722.3605.1 ID=mRNA_H-canaliculatus_F_contig14722.3605.1|Name=mRNA_H-canaliculatus_F_contig14722.3605.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2506bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14722:16..2521+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14722:16..2521+ >mRNA_H-canaliculatus_F_contig14722.3605.1 ID=mRNA_H-canaliculatus_F_contig14722.3605.1|Name=mRNA_H-canaliculatus_F_contig14722.3605.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1806bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14722:16..2521+ (Hapterophycus canaliculatus Oshoro5f female)back to top |