prot_H-canaliculatus_F_contig14698.3586.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig14698.3586.1
Unique Name	prot_H-canaliculatus_F_contig14698.3586.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	79

Homology

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BLAST of mRNA_H-canaliculatus_F_contig14698.3586.1 vs. uniprot
Match: A0A6H5LGC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGC4_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 7.050e-24
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0

Query:    1 MTAAEHLPAPPAEAFQAVLGACDASGRVGEALDVAQAMVVAGYAPSARLVARLMASHSEELEIERREAEEAAAAPAED 78
            MTAA+HLP PP EAF+AVLGACD++GRVGEAL++AQ MV AG++PS  L+ RLMASH++EL+ ERRE EEAAA PAE+
Sbjct: 1354 MTAADHLPPPPEEAFRAVLGACDSAGRVGEALEIAQVMVGAGFSPSIALMTRLMASHADELDRERREMEEAAAEPAEE 1431

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BLAST of mRNA_H-canaliculatus_F_contig14698.3586.1 vs. uniprot
Match: D7FX74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX74_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 2.440e-23
Identity = 54/78 (69.23%), Postives = 68/78 (87.18%), Query Frame = 0

Query:    1 MTAAEHLPAPPAEAFQAVLGACDASGRVGEALDVAQAMVVAGYAPSARLVARLMASHSEELEIERREAEEAAAAPAED 78
            MTAA+HLP PP EAF+AVLGACD++GRVGEAL++AQ MV AG++PS  L+ RL+ASH++EL+ ERRE EEAAA PAE+
Sbjct: 1088 MTAADHLPPPPEEAFRAVLGACDSAGRVGEALEIAQVMVGAGFSPSISLMTRLIASHADELDRERREMEEAAAEPAEE 1165

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig14698.3586.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig14698.3586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5LGC4_9PHAE	7.050e-24	70.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FX74_ECTSI	2.440e-23	69.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..74

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig14698	contig	H-canaliculatus_F_contig14698:298..534 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig14698.3586.1	mRNA_H-canaliculatus_F_contig14698.3586.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig14698 2..1049 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig14698.3586.1 ID=prot_H-canaliculatus_F_contig14698.3586.1|Name=mRNA_H-canaliculatus_F_contig14698.3586.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=79bp
MTAAEHLPAPPAEAFQAVLGACDASGRVGEALDVAQAMVVAGYAPSARLV
ARLMASHSEELEIERREAEEAAAAPAED*