prot_H-canaliculatus_F_contig1463.3561.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1463.3561.1
Unique Nameprot_H-canaliculatus_F_contig1463.3561.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length481
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1463.3561.1 vs. uniprot
Match: D8LEY6_ECTSI (J domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY6_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 4.800e-94
Identity = 212/321 (66.04%), Postives = 230/321 (71.65%), Query Frame = 0 
Query:  162 GLRKPRDADGTPRGSENPDSRDENEGASRSSGGTKANVSS--VPASKRGPPEDDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPRAPTSSSFSSQEPAPELRLTSSQQPRASFDGIDELLEAERPAAAGAAAADADFFKFRGKEELASVERRQEVEXXXXXXXXXXXXXXXXXXXSDGGSAVKVELATQLGLPATSTYDELRTAYRVEIKRCHPDLAGNNEFRVKFLERKFLKLQGCWDEFSAEQAAGAATVRTAKAEAGGRDAGGSSQAARXXXXXXXXXXXXXXXXXXXXXXEAAHRSRRPVMDPGRKVMDPGNTSSC 480
            GLRKPR  DG+    E+PD     E      G  +  + S  +PASKR PPE+DDIWSKHSVFEFKSLNDPDTNACGYKGLSGQP +    + SSQ PAPE RLTSSQQP A FDG+ +L EAERP    AA  DADFF FR K+ LASV+RR+EVE XXXXXXXXXXXX         GSAVKVELATQLGLPA+STYDELRTAYRVEIKRCHPDLAG+NEFRVKFLERKF KLQGCWD F+AE+ A +                       XXXXXXXXXXXXX   XXXXXX  A RS RPVMDP RKVMDPGNTSSC
Sbjct:    2 GLRKPRGPDGSRSSGEDPDP----EXXXXXGGSMRERMMSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPSSSRRRTRSSQAPAPERRLTSSQQPAAFFDGVGDLKEAERPTGTDAAF-DADFFAFREKDSLASVKRRREVERXXXXXXXXXXXXD--------GSAVKVELATQLGLPASSTYDELRTAYRVEIKRCHPDLAGDNEFRVKFLERKFQKLQGCWDMFNAERTASSTATXXXXXX---------XXXXXXXXXXXXXXXXXXDWEXXXXXXXXAGRSGRPVMDPDRKVMDPGNTSSC 300
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BLAST of mRNA_H-canaliculatus_F_contig1463.3561.1 vs. uniprot
Match: A0A6H5KWT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT2_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 3.000e-58
Identity = 163/290 (56.21%), Postives = 183/290 (63.10%), Query Frame = 0 
Query:   78 LARDYGHGTGGVYRSRPRTALYGIQRDLFSPVQSKPQLAARSWSSSSSSSPSCDD----LCLSNRLASAGDDFPRSSCRRRRR-STRLAGLRKPRDADGTPRGSENPDSRDE-NEGASRSSGGTKANVS-SVPASKRGPPEDDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPRAPTSSSFSSQEPAPELRLTSSQQPRASFDGIDELLEAERPAAAGAAAADADFFKFRGKEELASVERRQEVEXXXXXXXXXXXXXXXXXXXSDGGSAVKVELATQLGLPATSTYDE 360
            LA    H      RS   TAL+  + +  +P  SKP   +  WSSS              CL+N    +GD   R    RRRR STRL GLRKPR  DG+    ENPD  +E NEG S      +  VS ++PASKR PPE+DDIWSKHSVFEFKSLNDPDTNACGYKGLSGQP +    + SSQ PAP  RLTSSQQP A FDG+ +L EAERP    A   DADFF FR K+ LASV+RR         XXXXXXXXXXXXXX   GSAVKVELATQLGLPA+STYDE
Sbjct:   18 LAPPSHHDNACARRSLRPTALHYARHEWSAPTLSKPLPTSPRWSSSXXXXXXXGSKIVHACLAN---GSGDGSTRLGYGRRRRDSTRLMGLRKPRGPDGSRSSGENPDPEEEDNEGGSM----RERMVSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPTSSPRRTRSSQAPAPARRLTSSQQPGAFFDGVADLKEAERPTETDATF-DADFFAFREKDLLASVKRRX--------XXXXXXXXXXXXXXXXKGSAVKVELATQLGLPASSTYDE 291
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1463.3561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEY6_ECTSI4.800e-9466.04J domain-containing protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5KWT2_9PHAE3.000e-5856.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 436..456
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..480
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 341..407
e-value: 4.8E-6
score: 28.3
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 349..404
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 345..420
score: 8.932

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1463contigH-canaliculatus_F_contig1463:11365..14301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1463.3561.1mRNA_H-canaliculatus_F_contig1463.3561.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1463 11365..14487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1463.3561.1 ID=prot_H-canaliculatus_F_contig1463.3561.1|Name=mRNA_H-canaliculatus_F_contig1463.3561.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=481bp
MASAAALALPSCCTSASSMATAFVSAPAVAAAAALSDRIRMSPSSLPVGL
ALLSPCSSGISRSSNRMDGGFPPPTQWLARDYGHGTGGVYRSRPRTALYG
IQRDLFSPVQSKPQLAARSWSSSSSSSPSCDDLCLSNRLASAGDDFPRSS
CRRRRRSTRLAGLRKPRDADGTPRGSENPDSRDENEGASRSSGGTKANVS
SVPASKRGPPEDDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPRAPTSS
SFSSQEPAPELRLTSSQQPRASFDGIDELLEAERPAAAGAAAADADFFKF
RGKEELASVERRQEVERRRRGPGGGGGRRRGAVGGSDGGSAVKVELATQL
GLPATSTYDELRTAYRVEIKRCHPDLAGNNEFRVKFLERKFLKLQGCWDE
FSAEQAAGAATVRTAKAEAGGRDAGGSSQAARARARARAQEEARQQQAAA
VAAAEAAHRSRRPVMDPGRKVMDPGNTSSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf