mRNA_H-canaliculatus_F_contig1462.3556.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1462.3556.1
Unique NamemRNA_H-canaliculatus_F_contig1462.3556.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A6H5JED9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JED9_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 2.070e-117
Identity = 192/248 (77.42%), Postives = 210/248 (84.68%), Query Frame = 3 
Query:   27 MIPRVFGAIACGTCVVTAFVLPAVVRSPQS--DALSRQTSTGSNVIAHQAKALHMAAGGGAESQSRRDVIAG--VGKAVAAAVAATTLVSAATPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDEEGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKNLKFRSLKAISYAGGKQYGAITECEMNPLAAECDFD 758
            MIPRV G I CG C  +AFV P+V+RS Q   D  SR +S  S+V  H+ +A+ M    G E QSRR+VIAG  VGK+VAAAV  TTL SA+ P+EA AFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTV ANNPSPKEV+DAAVFGFV+DE+ TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEP EDF+ K LKF+SLKAISYAGG+QYGAITECEMNPLAAECDFD
Sbjct:    1 MIPRVLGFIVCGACAASAFVAPSVLRSQQQHGDTPSRYSSRSSSV-GHRREAMSM----GGEPQSRRNVIAGKGVGKSVAAAVGVTTLASASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 243
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A835YQZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 3.560e-60
Identity = 110/190 (57.89%), Postives = 138/190 (72.63%), Query Frame = 3 
Query:  195 GGAESQSRRDVI--AGVGKAVAAAVAATTLVSAATPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDEEGTSVVANNPDGASDAGQFAIIDKI-PKGSSRVSFQFVAAIEPSEDFNSKNLKFRSLKAISYAGGKQYGAITECEMNPLAAECDF 755
            GG++    RDV+    +   VAAA+A TT VS A      A GP+K+ LT P YA V CPP TQVPG+KAGAGL+PVC+KV   A+NP+ K++ + A+FG V+DE+GTSVVANNPDG +DAGQFA+I+ + P G S++ FQFVAAI P E+ + K L F S+KAISY G  +YGAITECEMNPLA ECD 
Sbjct:   42 GGSKDVIGRDVLLRGALSAGVAAALALTTAVSPAD-----AIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDL 226
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A7S4D819_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D819_HETAK)

HSP 1 Score: 152 bits (384), Expect = 9.950e-39
Identity = 94/195 (48.21%), Postives = 119/195 (61.03%), Query Frame = 3 
Query:  177 LHMAAGGGAESQSRRDVIAGVGKAVAAAVAATTLVSAATPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGE---KAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDEEGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKNLKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            LHM+A GG    SRR++ +   K+ AA   A+   + A P  A A GP+KM LT   Y +V C  K    G    K+ AGL   CV+VT    NP  K +IDA+VFGFV+D  G+SVV NNPD  SDAGQFAII KI  G S + F+ VAA+ PSE  +   L+F S+KAISY GG +Y AI++C+ NP    CD
Sbjct:   59 LHMSADGGL---SRRELFSAAAKSGAAFGLASAFTTGAAPM-ASAIGPVKMPLTNIAYQAVDCKGKELSGGSFTSKSTAGLVSYCVEVTADVFNPEKKTIIDASVFGFVFDNTGSSVVLNNPDARSDAGQFAIIPKIVPGKSNIKFEMVAAV-PSERGDVGELRFESIKAISYPGGDRYKAISDCDFNPSGDGCD 248
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A7S2SGY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGY2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.070e-35
Identity = 85/186 (45.70%), Postives = 114/186 (61.29%), Query Frame = 3 
Query:  216 RRDVIAGVGKAVAAAVAATTLVSAATPEEAVAFGPIKMELTEPEYASVVCPPKTQ---VPGEKAGAGLKPV---CVKVTVAANNPSPKEVIDAAVFGFVYDE-EGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKNLKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            RRD I    K+  AA AAT  ++    E   A GP+ MEL++ EY +V CPP  +   + G   G+  + V   CVKVT +  NP+ K ++D AVFGFV D   G SV+ANNPD  SDAGQFA ID++P G  RVSF FVA +    +     L+FRS+KAISY GG ++  ++ CE++ LA EC+
Sbjct:   77 RRDAI----KSTLAAAAATLALAGPRAE---AVGPVNMELSDVEYEAVECPPSLKAGRIGGAFGGSASRQVLQQCVKVTCSVTNPTKKSLVDTAVFGFVLDPITGASVIANNPDLRSDAGQFASIDEVPPGDQRVSFIFVATLGKESEGKLPPLEFRSIKAISYPGGARFAELSPCELDSLAPECE 255
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A1Z5J9N6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9N6_FISSO)

HSP 1 Score: 140 bits (352), Expect = 2.590e-34
Identity = 67/160 (41.88%), Postives = 100/160 (62.50%), Query Frame = 3 
Query:  291 TPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYD-EEGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKN-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            TP+ A A GP+++ LT   Y +  CPP   +PG+KA  G++ +CV V    N+P PKE+    V+GF+ D + G SV+ANNPD ++DAGQFAI++K+      + F+F+AA+   +D    +     L F SL+ +S+ GG+QYG I  CEMN  + EC+
Sbjct:   61 TPQSAHAIGPVRVSLTPTSYIARTCPPNKPIPGQKAMQGMRGLCVTVQATLNDPVPKELEKVGVYGFITDGDTGDSVLANNPDLSTDAGQFAIVEKVKTTDKTIEFEFIAAVPREKDLTQYDNGIGPLHFESLRLVSFPGGQQYGEINPCEMNEFSIECE 220
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A7S1DBN0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBN0_CYCTE)

HSP 1 Score: 136 bits (343), Expect = 5.640e-33
Identity = 74/174 (42.53%), Postives = 108/174 (62.07%), Query Frame = 3 
Query:  249 VAAAVAATTLVSAATPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDEE-GTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKN-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            VAA V A T +  + P +AV  GPIK+ L  P Y++  CPP   +PGEKA  G++ +CV V       +PK++    V+GFV D + G SV+ANNPD ++DAGQFA+++ +     +V+F FVAA+   +D +        L F SL+ IS+ GG+QYGAI+ CEM+  + EC+
Sbjct:   56 VAAVVGAATTLLPSDPAQAV--GPIKVALVNPVYSAQPCPPNRPIPGEKAMKGMRGLCVTVQADLETETPKDLDKVGVYGFVTDSDTGESVLANNPDLSTDAGQFAMVESVTTSDKKVTFDFVAAVPREKDISQYENGIGPLTFGSLRVISFPGGQQYGAISPCEMDEFSMECE 227
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: K0THP2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THP2_THAOC)

HSP 1 Score: 135 bits (340), Expect = 2.270e-32
Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 3 
Query:  309 AFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDEEGT-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKN-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            A GPIK+++  P Y +  CP    +PGEKA  G++ +CV+V       SPK++    ++G+V D E T SV+ANNPD  +DAGQFAII +I     ++ F+F+AA+   +D +        L F+SL+ +S+ GG+QYGAI+ CEMN  ++EC+
Sbjct:   91 AIGPIKIDIINPSYVAAPCPKDKPIPGEKAMKGMRGLCVQVKAELAENSPKDLEKVGIYGYVDDAESTESVLANNPDSGTDAGQFAIIPEIKTTDKKIEFEFIAAVPMEKDISKYEDGIGPLSFKSLRIVSFPGGQQYGAISPCEMNEFSSECE 244
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: B8BWP2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWP2_THAPS)

HSP 1 Score: 133 bits (335), Expect = 1.210e-31
Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 3 
Query:  309 AFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDEEGT-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKN-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            A GPIK+ +  P Y +  CPP   +PGEKA  G++ +CV+VT       PKE+    V+G+V D E + SV+ANNPD  +DAGQF +I+ +     +V F+F+AA+   +D  S       L+F+SL+ IS+ GG+Q+GAI  CEMN  + EC+
Sbjct:   94 AVGPIKINILNPTYTAAPCPPSKPIPGEKAMKGMRGLCVQVTAELEELPPKELEKVGVYGYVNDAETSESVLANNPDSGTDAGQFGMIESVGIKDKKVEFEFIAAVPMEKDVTSYENGIGPLEFKSLRIISFPGGQQFGAINPCEMNEFSEECE 247
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BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A1E7EZ87_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZ87_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.620e-31
Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 3 
Query:  213 SRRDVIAGVGKAVAAAVAATTLVSA----ATPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVID-AAVFGFVYDE-EGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKN-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            SR++  +   + VA AV  T  V+A    A P+   A GP+K+ L  P Y ++ CP    +PGEKA  G++ +CV V V   +  PK+ ++   V+G+V D   G SV+ANNPDG +D+GQFA+I+ I     ++ F+F+AA+   +D          + F+SL+ +S+ GG+QYGAI  CEMN  + ECD
Sbjct:   57 SRQNFFSKTVQTVATAVTTTASVAAVVGVAQPKSVNAIGPVKINLLNPTYTAIPCPKDRPIPGEKAMKGMRGLCVTVAVDLED-LPKDPLEKVGVYGYVTDTGTGESVLANNPDGGTDSGQFAMIESITTTDKKIQFEFIAAVPSEQDLRGYEAGIAPINFKSLRVVSFPGGQQYGAINPCEMNEFSDECD 246
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Match: A0A6V2NP08_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NP08_9STRA)

HSP 1 Score: 130 bits (328), Expect = 7.400e-31
Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 3 
Query:  273 TLVSAATPEEAVAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDAAVFGFVYDE-EGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSEDFNSKN-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 752
            T   A  P EAV  GP+K+ LT P Y +  CPP   +PGEKA  G+K +CV V        PK++    V+GFV D   G SV+ANNPD ++DAGQFA+I+ +     +V F+ +AAI   +D          L F  L+ ISY GG+QYGAI+ CEMN  ++EC+
Sbjct:   67 TSYGAGGPAEAV--GPVKVTLTNPTYFAEPCPPSKPIPGEKAMKGMKGLCVTVKADLAESPPKDLEKVGVYGFVTDGVTGDSVLANNPDLSTDAGQFAMIESVTTNDRKVEFELIAAIPREKDVTQFENGIGPLNFDGLRIISYPGGQQYGAISPCEMNEFSSECE 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1462.3556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JED9_9PHAE2.070e-11777.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQZ7_9STRA3.560e-6057.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D819_HETAK9.950e-3948.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SGY2_9STRA4.070e-3545.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5J9N6_FISSO2.590e-3441.88Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1DBN0_CYCTE5.640e-3342.53Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
K0THP2_THAOC2.270e-3242.21Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8BWP2_THAPS1.210e-3142.86Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1E7EZ87_9STRA1.620e-3139.27Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6V2NP08_9STRA7.400e-3143.98Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1462contigH-canaliculatus_F_contig1462:17153..22491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.8
Seed ortholog evalue1e-96
Seed eggNOG ortholog2880.D8LQV9
EggNOG OGs2D3UH@1,2S515@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_001760.1
Exons6
Model size1730
Cds size735
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1462.3556.1prot_H-canaliculatus_F_contig1462.3556.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1462 17179..21522 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929211.50276-UTR-H-canaliculatus_F_contig1462:17152..171781622929211.50276-UTR-H-canaliculatus_F_contig1462:17152..17178Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 17153..17178 +
1696845719.5484679-UTR-H-canaliculatus_F_contig1462:17152..171781696845719.5484679-UTR-H-canaliculatus_F_contig1462:17152..17178Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 17153..17178 +
1622929211.604811-UTR-H-canaliculatus_F_contig1462:21522..224911622929211.604811-UTR-H-canaliculatus_F_contig1462:21522..22491Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 21523..22491 +
1696845719.6214104-UTR-H-canaliculatus_F_contig1462:21522..224911696845719.6214104-UTR-H-canaliculatus_F_contig1462:21522..22491Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 21523..22491 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929211.5225892-CDS-H-canaliculatus_F_contig1462:17178..173861622929211.5225892-CDS-H-canaliculatus_F_contig1462:17178..17386Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 17179..17386 +
1696845719.5583777-CDS-H-canaliculatus_F_contig1462:17178..173861696845719.5583777-CDS-H-canaliculatus_F_contig1462:17178..17386Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 17179..17386 +
1622929211.537286-CDS-H-canaliculatus_F_contig1462:18416..185621622929211.537286-CDS-H-canaliculatus_F_contig1462:18416..18562Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 18417..18562 +
1696845719.566359-CDS-H-canaliculatus_F_contig1462:18416..185621696845719.566359-CDS-H-canaliculatus_F_contig1462:18416..18562Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 18417..18562 +
1622929211.5496392-CDS-H-canaliculatus_F_contig1462:19254..193021622929211.5496392-CDS-H-canaliculatus_F_contig1462:19254..19302Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 19255..19302 +
1696845719.5748794-CDS-H-canaliculatus_F_contig1462:19254..193021696845719.5748794-CDS-H-canaliculatus_F_contig1462:19254..19302Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 19255..19302 +
1622929211.561776-CDS-H-canaliculatus_F_contig1462:20198..203271622929211.561776-CDS-H-canaliculatus_F_contig1462:20198..20327Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 20199..20327 +
1696845719.5907762-CDS-H-canaliculatus_F_contig1462:20198..203271696845719.5907762-CDS-H-canaliculatus_F_contig1462:20198..20327Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 20199..20327 +
1622929211.5787513-CDS-H-canaliculatus_F_contig1462:20779..208961622929211.5787513-CDS-H-canaliculatus_F_contig1462:20779..20896Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 20780..20896 +
1696845719.6012344-CDS-H-canaliculatus_F_contig1462:20779..208961696845719.6012344-CDS-H-canaliculatus_F_contig1462:20779..20896Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 20780..20896 +
1622929211.591816-CDS-H-canaliculatus_F_contig1462:21435..215221622929211.591816-CDS-H-canaliculatus_F_contig1462:21435..21522Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 21436..21522 +
1696845719.611326-CDS-H-canaliculatus_F_contig1462:21435..215221696845719.611326-CDS-H-canaliculatus_F_contig1462:21435..21522Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 21436..21522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1462.3556.1

>prot_H-canaliculatus_F_contig1462.3556.1 ID=prot_H-canaliculatus_F_contig1462.3556.1|Name=mRNA_H-canaliculatus_F_contig1462.3556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=245bp
MIPRVFGAIACGTCVVTAFVLPAVVRSPQSDALSRQTSTGSNVIAHQAKA
LHMAAGGGAESQSRRDVIAGVGKAVAAAVAATTLVSAATPEEAVAFGPIK
MELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVAANNPSPKEVIDA
AVFGFVYDEEGTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIE
PSEDFNSKNLKFRSLKAISYAGGKQYGAITECEMNPLAAECDFD*
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mRNA from alignment at H-canaliculatus_F_contig1462:17153..22491+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1462.3556.1 ID=mRNA_H-canaliculatus_F_contig1462.3556.1|Name=mRNA_H-canaliculatus_F_contig1462.3556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5339bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1462:17153..22491+ (Hapterophycus canaliculatus Oshoro5f female)
GTTGCACGCACGATAGCAAAGGCAACATGATCCCTCGCGTATTTGGAGCT
ATCGCGTGCGGAACCTGCGTCGTGACGGCGTTCGTCCTTCCCGCTGTTGT
GAGATCACCTCAGAGCGATGCTCTTTCTCGACAGACCAGCACAGGCAGCA
ATGTGATCGCGCATCAAGCGAAGGCGTTGCATATGGCAGCAGGAGGAGGA
GCAGAGTCGCAGTCCCGCAGGGATGTCATCGCCGGTAAGAAAAAAGGGAT
GTCGCAGAAGGGATGTCGATGGGCGTATTGATGAGGGCGCTTGAGCTTGT
GATGTGGAGAAAATTGGAACTGATCATGTTTCTGACTCGGTTGAAAACAT
GTTACGGTCCTCATGTTCCTGTAGACTCAAGAGCCGCACTTGTTGCCCTG
TAAAGTTTCCTCAATGATCCCTTTGTAGCGGGACGCGTCTCAATGATGTG
CCGTCCATGAGCAATTCTACTTGCCAGCCAATGCAACTCTTTTTGCAAGC
CAAGATTGTGCGGCCTTGCTTCGCATACCCCGAGTGCTCGATAGGTGCAT
TGACTCTTCCAGGTACGACGCATGACAGCACTTCATCGTAGCGTTTTATT
CAAATTGTTTCATCTCTAGCACATGGTCATGTTCCGATTTTATAACTCTG
TACCTAGTCTGGGAGATAGTACGCAACGTTTGATAGCGGCCTTCTTTCCT
TCCACGACCGGCGATCTACCTGCATCAACGGCAGCAAAAAGCTTTTAAAC
CAGGGCGTTGAAATCCTTCCGTGCACCTCGCACGCTGGAGACCGGCTCAG
ACGTCGTATTCTGGGGTGCGAGCGCCTTGGATGTAGAGGCACTGTTGCTG
TTGCATCTGTACGTGCATCCGGATCACGCCACGAAGCACACCAACTCCGT
CCCCTCGACAGAGTAGCCCTTCTCCGTATACTGCAGGCCGATGGCTGAAA
CACCACGGCAAACATTGTGCAAAATGAAGGCGCAGGTCCAACAGCTGCTG
CCTCTCACTCGACGCACCTAGACCGCGACGGTCTTGTGGGTTGTATTGTA
CACACTGCCGCCGTCCCGGCTACGACGACGTCGAGGGTTTCGCGCTAGGA
ACCCGCTCGCTCACTAACTGTCGACGAGGAAGCCGTGATTGTGTCCCATG
AACGCCTTGCCTGAATCCTCTTAAGATACAACGTGTCAACCCGCTCGAAA
CCTCTGGTTGCGATGCTCATACGCTTGTTGCACGCCGCTGCTGTTATTGC
TGCTGCCGCTGTAGGGGTAGGCAAGGCTGTGGCGGCGGCCGTGGCGGCTA
CGACGCTGGTATCAGCGGCGACACCGGAGGAAGCGGTGGCGTTTGGCCCG
ATTAAAATGGAGCTCACGGAACCCGAGTACGCGTCGGTGGTCTGCCCACC
AAAGACTCAGGTGTGGGCAGGACTCGGACGCTGCGTGGACTTTTTGGGTG
CTCCTGCTTCTCTTGTTGCGCTGTACAGGGAGCCGGCCAAGCCTGCGGCC
GTGTCACGACAGTCTTGTCGAAGAGTCGTTAGATCCCTTGTTCGAAGGGC
ACGTTCGCGTTTCATATGCGCACCGCTTACGTCAAGATCCGTGAGCATGA
TTTGACCCGTCTGGGGACAGAATGAAAACTGTAGCTTCCGTTCCGCATCT
TCTGCGAAGTGGATGGACAGAGCGAAGTGCCAAGTGAGCGGGCACAGCTG
CTGTTTTGTACTCGTACGTTACACCCAAAATACGGTCCCTCCATCTTCAT
TTGAACCTCTATCTTTCGGATTTTGAGGGAGATGCCGCGCGGATGAAGGC
AGGCAGGCAGCAGGCAGGCAAACAGGAACAGCGTTCAGGGATGCAGGGAC
GTAAATGGAGGGGGGGAGAGAGAGATGAAGCACGAGGGGGTGTGAAGAGC
GGCGCAACAGCGAGTCGAGGGGGGGGATAACGGAATTCGAATCCGTTGGC
AGCTCTACCCACGTGTGACGGATGCCTGGCTTGGAAACGCGAGGATAGAT
GGGAAACACCAAACACCCAGCCGCATGAAAATTCCGGCAAAACCTCGACA
GGAACTCACCGCGGCTTGTTTGTCGTTGTTGGTATATACTCTTTTTTCGC
AGGTCCCCGGGGAGAAAGCTGGAGCGGGGCTCAAGCCGGTGTGCGTGAAG
GTAAGGGTGGCGCCTTCTTGGCAAGGCATCGCGGCTTCCAAGTTTCTTTT
TTGTTGCTATTACGAGACGTCAGCGGTTCACGTCCAAACTGAGTTGTTAA
ATCTGCTCGGGAGACTGTTGCTTACTTCTGTAGTTCTGCGTGACACCTGC
CTTCCTTTCGGATGGAAACTACAATACTGTCGAAAACGAGACGAGCCTGC
ATCTCCTTGGCTTTGATGGTAACTCAGGTGAATGCTGATTTGTGTGTACT
ATGATTCGAAAGGAACCGGGAAAGCTGGGAAAGCTATGTGTTGAGAGGCT
CATTTATCAGCTTGGGTTGGTCTGATAGTGTTTTTGAGAGACGGGGAGCT
ATTATTCTGTATGGGCATGGTTCGGGTGTGTCACAGTTTGTATCCAAACC
GATAAATGTGCCGTAGATACAACTGGCTTGCGTTGACTGCCTTTCGTGCC
ACTTTCGGCGGGGAAGAGCTTGTTTGGGCGTTACTTTGGCCTTTCGTCGG
CGGGCTGTTGGTGTGAACGACACAGATTAATTTGCTGTGGCTGTAGGCTG
CCTGATGTGTGTTGTGGCACTGGGCTTTTCCGGTCGTTTGGCCAGGAAAA
GCTGGGCTTTTCCGGTCGTTTGGCCAGGAAAAGCCCGCTTTGCTTTCGTT
TACTAGCTCAAACTATCGCCTGCTGCGGGTCTCAGTCAAATACAATCAGG
TGCGCCTGTAATACGAGGGAACAACCGCTTGAACTGCTGCCGTTGGAGGC
GCAGAGCTGCTTGTGCACGCCCCCCCCGTCCGCGTCGCAGCGTCATCGCT
TCTTCCCTACACATGCCACGGACACTGGTGCCGTGCGTTTTCGAGGGAAC
CCGTCGTCACATGTTTATTTCGATCGTGGTCGGTCGCTCACTGCAGGTGA
CTGTGGCGGCAAACAACCCCAGCCCGAAAGAGGTGATCGACGCGGCGGTG
TTCGGCTTCGTGTACGACGAGGAGGGCACCTCGGTGGTGGCCAACAATCC
GGACGGGGCGTCTGACGCCGGTCAGGTGAACGACCCGTTGCGTCTCCACT
GATCTAGGGGTCGGGGCGATGCTTGACGCTGCTGTTCGTCCATTCGATTC
TGTTGGTGCTGCCGCTGCCGATGCTCGTGCTGATGATACTGCTGCTTCCT
CCGACGTTGTTGTTGTTGTCGCCGATGCTGCTGCTGCTGCCGTTACTGTT
CTTGTTAGTCTCCTCTTTGCTACCGTCTTCCCTTGCCTCAGTACAAAGCT
GCCTCGCCCGCGACAGCGACCCCGTCGCATCCCCTGAATCGCTCGCAAAA
CGCCAAGTTGCGACTCACATGCCTCCAGTCCGTCGGCCCACTTTTTTTAC
GTTCTGCCTCTCGTCCATACGGCGTGGCGGATAGTTTCTCCTCAGCTGAT
GGCATCGATTGCTGTGCTCTGGTTGCATTCATCAAACTTTGCCATATGCC
ACATTTGCTTCCTCGCCAACGTCTCAGTTCGCCATCATCGATAAGATCCC
CAAGGGTAGCAGCCGGGTTTCTTTCCAATTCGTCGCCGCCATCGAGCCCA
GTGAGGACTTCAATTCCAAAAATCTGAAGTTCAGGTCGCTCAAGGTATGT
ACCACGTGTGTGTGTTATTTCGCAGGGATGGGTGTGTAACTCCATCCCCT
CTCGTTCAGGTGCAAGACCGACCTCTCCCGTCGTCTTCATTTCCCCGAAA
TTTCTTGCGGGTTTGAGCTCACACACGGATGACACACCTCGTTTGATGGG
CATCGCCTCAATGTCCCATCGTTCAGACTTGAACAAGTAATGCAAGAGAA
GAACGGCCCTTCCTCAAAGCTTTTCCTCCTTTTCATAACGGCATCGCTTC
CTGTCCCGCCCGAGAAATTCGTGCCCACCTCCGCCTCACGCAACTCGATG
GTGCCAGTAGTTACGCGAGCACCGCCCACCACAGACTCTCGGACCGTACA
CCCCCTACGCCGCCTACAGGCCCACACGCCTTCACAGCCGAATCCGCCGA
GACTCGTCTTCTGCTTCTTCGCGCCCTTGTCTTGTTCGTGTGCTATCGAG
CCTCCAGCACGCGAAAGGCTCATGTGTCACAACCACAGCGAAAACACCAA
TGCCGTTCGTTCGGCGTGCTCGTTCGCGCGCAGGCGATCTCGTACGCGGG
AGGGAAGCAGTACGGAGCGATCACGGAGTGCGAAATGAACCCTCTCGCGG
CAGAGTGCGATTTCGACTGAGCTCCGCGGACGCTCGGGTCGGGGCCAGGT
ATTGCGGCGTACGGAGGGCGTGCCATGTTTCCGAGGGCAGTTCGCGGCGG
AGGCGGAGGCGGAGGCGAGGCGGGCTGCGGCAAGTCCGTCCGGGGTCACC
TGCGCGTGGGTCTCGAGGCGCAGATGGAGCCCTGTTGCCGGACTCGCTTA
ATAGTCGGGAATTTAGGGGGGGTGTTAGACGATAGAGGATAAGCACCCAG
ACGCATTTTAGAGAGGTTGATACGTATCAATAGAGTGGCTCTGCGTTTGC
CCGAGGAGGTGCTTCGATACGTGGAAGAGGGCGAAGTAAACAGGGGCAGT
ATCGGTGGCTGGGGTGCTACAACCACCTCCGCTATTGTGATAGATTGCAT
TTTTTCTTGTGTAATGAAACTGACACTGCGATGCGTAAGTGGAGCGCACG
TTTGGTTTGACGCCATGAAGGCGATTGGGCACGAGTCCATAATGTTACAC
GTACCAGGTGGGATGGGTAGCTCCGTGACGGTCCTGGGAGTTGATCCATG
CGCAGCTTCAATGGGCAAAATGGCAGTACAGCAGTGCTGCCGATCGATAC
CACCCCGCCCCGTCGTACGATCTCGTTTTGTTGCCGTCGACTCCCCCAAG
CGAACGCCCGCCGATTTCACGTTCACATCAGTTTCGTTTGGAACGATGAT
ACCTTTTGGTTTTTCCCCGACCAGGCAGTCACGCGCGTGACCGCCGCCAG
ATTTCTTCCACGCCCCCTGTGCAAGGCAACTCGCGATGAACGCGCTCCTT
CCTGTCGATTCGTGCGATGTGTTCCGCTTCGACAGATGCGCACGCATCTT
TTTCTCCACTCCAAATTGTTTGTGTTGTGTGGAGTAGTAAAAGGATCGTG
ATCTTCGTGTCTCCCAAGTCCGCCCTGTATTCGCCCTCGATGTTTAATTC
GTGAAAGCCTTCTGTCACGGTCCGACGCATGCGTTTTTT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1462:17153..22491+

>mRNA_H-canaliculatus_F_contig1462.3556.1 ID=mRNA_H-canaliculatus_F_contig1462.3556.1|Name=mRNA_H-canaliculatus_F_contig1462.3556.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1470bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1462:17153..22491+ (Hapterophycus canaliculatus Oshoro5f female)
ATGATCCCTCGCGTATTTGGAGCTATCGCGTGCGGAACCTGCGTCGTGAC
GGCGTTCGTCCTTCCCGCTGTTGTGAGATCACCTCAGAGCGATGCTCTTT
CTCGACAGACCAGCACAGGCAGCAATGTGATCGCGCATCAAGCGAAGGCG
TTGCATATGGCAGCAGGAGGAGGAGCAGAGTCGCAGTCCCGCAGGGATGT
CATCGCCGATGATCCCTCGCGTATTTGGAGCTATCGCGTGCGGAACCTGC
GTCGTGACGGCGTTCGTCCTTCCCGCTGTTGTGAGATCACCTCAGAGCGA
TGCTCTTTCTCGACAGACCAGCACAGGCAGCAATGTGATCGCGCATCAAG
CGAAGGCGTTGCATATGGCAGCAGGAGGAGGAGCAGAGTCGCAGTCCCGC
AGGGATGTCATCGCCGGGGTAGGCAAGGCTGTGGCGGCGGCCGTGGCGGC
TACGACGCTGGTATCAGCGGCGACACCGGAGGAAGCGGTGGCGTTTGGCC
CGATTAAAATGGAGCTCACGGAACCCGAGTACGCGTCGGTGGTCTGCCCA
CCAAAGACTCAGGGGTAGGCAAGGCTGTGGCGGCGGCCGTGGCGGCTACG
ACGCTGGTATCAGCGGCGACACCGGAGGAAGCGGTGGCGTTTGGCCCGAT
TAAAATGGAGCTCACGGAACCCGAGTACGCGTCGGTGGTCTGCCCACCAA
AGACTCAGGTCCCCGGGGAGAAAGCTGGAGCGGGGCTCAAGCCGGTGTGC
GTGAAGGTCCCCGGGGAGAAAGCTGGAGCGGGGCTCAAGCCGGTGTGCGT
GAAGGTGACTGTGGCGGCAAACAACCCCAGCCCGAAAGAGGTGATCGACG
CGGCGGTGTTCGGCTTCGTGTACGACGAGGAGGGCACCTCGGTGGTGGCC
AACAATCCGGACGGGGCGTCTGACGCCGGTCAGGTGACTGTGGCGGCAAA
CAACCCCAGCCCGAAAGAGGTGATCGACGCGGCGGTGTTCGGCTTCGTGT
ACGACGAGGAGGGCACCTCGGTGGTGGCCAACAATCCGGACGGGGCGTCT
GACGCCGGTCAGTTCGCCATCATCGATAAGATCCCCAAGGGTAGCAGCCG
GGTTTCTTTCCAATTCGTCGCCGCCATCGAGCCCAGTGAGGACTTCAATT
CCAAAAATCTGAAGTTCAGGTCGCTCAAGTTCGCCATCATCGATAAGATC
CCCAAGGGTAGCAGCCGGGTTTCTTTCCAATTCGTCGCCGCCATCGAGCC
CAGTGAGGACTTCAATTCCAAAAATCTGAAGTTCAGGTCGCTCAAGGCGA
TCTCGTACGCGGGAGGGAAGCAGTACGGAGCGATCACGGAGTGCGAAATG
AACCCTCTCGCGGCAGAGTGCGATTTCGACTGAGCGATCTCGTACGCGGG
AGGGAAGCAGTACGGAGCGATCACGGAGTGCGAAATGAACCCTCTCGCGG
CAGAGTGCGATTTCGACTGA
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