mRNA_H-canaliculatus_F_contig14607.3549.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14607.3549.1
Unique NamemRNA_H-canaliculatus_F_contig14607.3549.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: D8LNL4_ECTSI (Mitogen-activated protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNL4_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 2.030e-46
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLKERA 249
            WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERE WVAALNQQI+GLKERA
Sbjct:   30 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERESWVAALNQQIKGLKERA 112          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A835Z2Y5_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y5_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.410e-33
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLKERA 249
            WK+RWF LEDHV+TY+S+QGD +PRGRMVL AESRVTNLPTR HAFQVITN+KALMV+ADT EE++ W   L  QI  L+ERA
Sbjct:   23 WKKRWFTLEDHVVTYYSRQGDPKPRGRMVLNAESRVTNLPTRPHAFQVITNSKALMVFADTPEEKDHWYGTLQTQIEALQERA 105          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A6V1P443_HETAK (Mitogen-activated protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P443_HETAK)

HSP 1 Score: 120 bits (302), Expect = 2.230e-30
Identity = 55/81 (67.90%), Postives = 71/81 (87.65%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLKE 243
            WK+R+F+++DH ITYFSKQGD +PRGRMVL ++SRVTNLP+R +AFQVITN KALMV+ADT EER++WV A+N+ +  LKE
Sbjct:   24 WKKRYFMMKDHTITYFSKQGDAKPRGRMVLNSDSRVTNLPSRPNAFQVITNNKALMVFADTFEERDQWVQAVNKVVSELKE 104          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A7S2C6J5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6J5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 8.180e-15
Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQI 228
            WK R F+L +  ++Y++K G+ + RG + +  +SRV++ P RVHAFQVIT  K+L V A++ EE   W  A+ Q+I
Sbjct:   30 WKGRHFVLSESALSYYAKAGEAKSRGDISITGQSRVSDFPKRVHAFQVITGDKSLTVCANSEEEYTEWKDAIKQRI 105          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A7S1U7I6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7I6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.700e-14
Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLKERA 249
            WKRR+F+L +  I YF++Q + R RG++ L A ++V +   +   FQVI+N  ALMV+AD   E+ERW+ A+ + ++ LK+ A
Sbjct:   28 WKRRFFVLTNDCIKYFTRQEETRVRGQLELNANTKVIDYRLKDFGFQVISNNTALMVHADDAREKERWMDAVKEAVQSLKDAA 110          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: W7U818_9STRA (Mitogen-activated protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U818_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.220e-11
Identity = 28/80 (35.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLK 240
            WKRR+F L  H+ITY++K+GD + R +M L A+S  ++  ++ + F ++T  K   + A+T +++  W  A+   IR L+
Sbjct:   42 WKRRYFTLHGHIITYYAKKGDAKCRNQMALTAQSVFSSSSSKKNGFSIVTAGKGFQLNAETPQDKHAWAVAVTSAIRSLQ 121          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.240e-11
Identity = 28/80 (35.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLK 240
            WKRR+F L  H+ITY++K+GD + R +M L A+S  ++  ++ + F ++T  K   + A+T +++  W  A+   IR L+
Sbjct:   42 WKRRYFTLHGHIITYYAKKGDAKCRNQMALTAQSVFSSSSSKKNGFSIVTAGKGFQLNAETPQDKHAWAVAVTSAIRSLQ 121          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: L8GXG1_ACACA (PH domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GXG1_ACACA)

HSP 1 Score: 53.9 bits (128), Expect = 5.800e-7
Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVL----IAESRVTNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQ 222
            W++RWF+L D  + Y+S      P+G + L       +R  + P R HAF +    K  ++ A  LEER+ W+ A+N+
Sbjct:   82 WQKRWFVLVDDFLFYYSSSSSATPKGIVRLDRLRAKPARPHDDPEREHAFSLPAQKKLYVLAASYLEERDEWLEAINR 159          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A2P6NTR4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTR4_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 6.750e-7
Identity = 29/92 (31.52%), Postives = 47/92 (51.09%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVL------IAESRV--------TNLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRG 234
            WKRRWF+L+D  ++Y++K  D  P G +VL      I E  V        TN       F+++T   + +++ADT  +   W+ ++   IRG
Sbjct:  407 WKRRWFVLKDPNLSYYTKPRDTIPNGFIVLDDIMTIITEENVLKEDVMMSTNEERPRFWFEIVTKTNSYLIHADTERDMNEWLDSIEHSIRG 498          
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Match: A0A6J2WHB8_CHACN (pleckstrin homology domain-containing family A member 2-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WHB8_CHACN)

HSP 1 Score: 53.5 bits (127), Expect = 2.280e-6
Identity = 26/87 (29.89%), Postives = 46/87 (52.87%), Query Frame = 1
Query:    1 WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVT-------NLPTRVHAFQVITNAKALMVYADTLEERERWVAALNQQIRGLK 240
            WKRR+F L DH ++Y+  + D  P   + L+   +V        +L TR + F++ITN +   + AD+ EE   W+  +  +I+  +
Sbjct:  202 WKRRFFTLNDHAVSYYKNEMDKEPLRSIRLMDIQKVHECLVKSGDLLTRDNLFEIITNTRTFYIQADSPEEMNGWIRDIQSKIQDFR 288          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14607.3549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LNL4_ECTSI2.030e-4697.59Mitogen-activated protein kinase n=2 Tax=Ectocarpu... [more]
A0A835Z2Y5_9STRA1.410e-3372.29Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
A0A6V1P443_HETAK2.230e-3067.90Mitogen-activated protein kinase n=1 Tax=Heterosig... [more]
A0A7S2C6J5_9STRA8.180e-1543.42Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1U7I6_9STRA1.700e-1442.17Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7U818_9STRA1.220e-1135.00Mitogen-activated protein kinase n=1 Tax=Nannochlo... [more]
A0A4D9D8Z4_9STRA1.240e-1135.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
L8GXG1_ACACA5.800e-733.33PH domain containing protein n=1 Tax=Acanthamoeba ... [more]
A0A2P6NTR4_9EUKA6.750e-731.52Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A6J2WHB8_CHACN2.280e-629.89pleckstrin homology domain-containing family A mem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14607contigH-canaliculatus_F_contig14607:1778..2026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue2.2e-14
Seed eggNOG ortholog2880.D8LF66
KEGG koko:K04371,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
EC2.7.11.24
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiondouble HA-tagged mitogen activated protein kinase 2 mitogen-activated protein kinase
Ec32 orthologEc-08_006680.1
Exons1
Model size249
Cds size249
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929209.820979-CDS-H-canaliculatus_F_contig14607:1777..20261622929209.820979-CDS-H-canaliculatus_F_contig14607:1777..2026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14607 1778..2026 -
1696845719.0636015-CDS-H-canaliculatus_F_contig14607:1777..20261696845719.0636015-CDS-H-canaliculatus_F_contig14607:1777..2026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14607 1778..2026 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14607.3549.1prot_H-canaliculatus_F_contig14607.3549.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14607 1778..2026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14607.3549.1

>prot_H-canaliculatus_F_contig14607.3549.1 ID=prot_H-canaliculatus_F_contig14607.3549.1|Name=mRNA_H-canaliculatus_F_contig14607.3549.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=83bp
WKRRWFILEDHVITYFSKQGDLRPRGRMVLIAESRVTNLPTRVHAFQVIT
NAKALMVYADTLEERERWVAALNQQIRGLKERA
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mRNA from alignment at H-canaliculatus_F_contig14607:1778..2026-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14607.3549.1 ID=mRNA_H-canaliculatus_F_contig14607.3549.1|Name=mRNA_H-canaliculatus_F_contig14607.3549.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=249bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14607:1778..2026- (Hapterophycus canaliculatus Oshoro5f female)
TGGAAACGGAGATGGTTCATCCTGGAGGACCATGTCATCACCTACTTCTC CAAACAGGGCGACCTCCGTCCGAGAGGTCGCATGGTACTCATCGCCGAGT CCCGTGTCACCAATCTCCCCACCAGGGTTCACGCGTTCCAGGTCATCACC AACGCAAAGGCGCTCATGGTGTACGCCGACACGCTGGAGGAGAGGGAGCG CTGGGTGGCGGCATTGAACCAGCAAATCAGGGGGCTGAAAGAGAGGGCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14607:1778..2026-

>mRNA_H-canaliculatus_F_contig14607.3549.1 ID=mRNA_H-canaliculatus_F_contig14607.3549.1|Name=mRNA_H-canaliculatus_F_contig14607.3549.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=498bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14607:1778..2026- (Hapterophycus canaliculatus Oshoro5f female)
TGGAAACGGAGATGGTTCATCCTGGAGGACCATGTCATCACCTACTTCTC
CAAACAGGGCGACCTCCGTCCGAGAGGTCGCATGGTACTCATCGCCGAGT
CCCGTGTCACCAATCTCCCCACCAGGGTTCACGCGTTCCAGGTCATCACC
AACGCAAAGGCGCTCATGGTGTACGCCGACACGCTGGAGGAGAGGGAGCG
CTGGGTGGCGGCATTGAACCAGCAAATCAGGGGGCTGAAAGAGAGGGCTT
GGAAACGGAGATGGTTCATCCTGGAGGACCATGTCATCACCTACTTCTCC
AAACAGGGCGACCTCCGTCCGAGAGGTCGCATGGTACTCATCGCCGAGTC
CCGTGTCACCAATCTCCCCACCAGGGTTCACGCGTTCCAGGTCATCACCA
ACGCAAAGGCGCTCATGGTGTACGCCGACACGCTGGAGGAGAGGGAGCGC
TGGGTGGCGGCATTGAACCAGCAAATCAGGGGGCTGAAAGAGAGGGCT
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