mRNA_H-canaliculatus_F_contig14596.3537.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A6H5JAG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG8_9PHAE) HSP 1 Score: 154 bits (390), Expect = 3.570e-46 Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 3
Query: 159 MASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQFVQL 431
M SRF+VMPLVAAMLL SGA+AK+IPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLT VYLLSAVPIAFLLSAILQFVQL
Sbjct: 1 MVSRFMVMPLVAAMLLFSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQFVQL 91
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: D8LM59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM59_ECTSI) HSP 1 Score: 104 bits (260), Expect = 2.570e-26 Identity = 63/94 (67.02%), Postives = 69/94 (73.40%), Query Frame = 3
Query: 3 VLAGSLARPAAVPXXXXXXXXXXXXELVGASSSTPA---YPAETKKAFYKKIAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEG 275
VLAGSLARPA+ P G +S+ PA Y ETK AFYKKIAAIM SRF+VMPLVAAMLLLSGA+AK+IPYDKLVWFVLLMEG
Sbjct: 15 VLAGSLARPASKPHPVAPAA-------AGEASTPPAAVAYQPETKAAFYKKIAAIMVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEG 101
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.870e-18 Identity = 51/88 (57.95%), Postives = 68/88 (77.27%), Query Frame = 3
Query: 144 KIAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLS 407
++AA+M +RFL+ P+ A +L + A +IP D L+ FVLLM+ CMPSAQNSVVILQ+E K E A SMAKTL+V+Y+L+ +PIA LLS
Sbjct: 360 RVAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQLENKKEAAGSMAKTLSVLYILACLPIALLLS 447
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A0G4EKC6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EKC6_VITBC) HSP 1 Score: 84.0 bits (206), Expect = 6.420e-16 Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 3
Query: 138 YKKIAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAI 413
++++ + +RF+ P +A LL G R +I D +WFVLLM+GCMP+AQ SVVILQ+E +P+ A+ MAKTLT++Y L +P+A L+S +
Sbjct: 394 FRRVLPVAFARFVCAPTIAFTLLTIGRRLGLIMNDPFLWFVLLMQGCMPAAQQSVVILQLENQPQAATVMAKTLTLLYSLGVIPVALLISLV 485
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.520e-14 Identity = 40/96 (41.67%), Postives = 69/96 (71.88%), Query Frame = 3
Query: 138 YKKIAAIMASRFLVMPLVAAMLLLSGARAKVIP-YDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQF 422
+++ +M RF +MP VA + +G R ++P D L+ FV+L++GCMPSAQNSV+ILQ+E++P+ A+S+A+ ++ VY+LS +P+ L+ +L +
Sbjct: 362 FRRAMLVMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQLERRPQAAASIARLISTVYILSILPVGMLIRTLLSY 457
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.700e-13 Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 3
Query: 132 AFYKKIAAIMASRFLVMPLVAAMLLLSGARAKVIPY-DKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQFVQL 431
A + AI +RF +MP A +LL G +IP D L+ FVLL++ CMP AQN+VVILQ++++P A+SMA +++VYL + VP+ LLS +LQ+V L
Sbjct: 381 ALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A836CLT3_9STRA (Auxin efflux carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.640e-13 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 3
Query: 81 LVGASSSTPAYPAET-KKAFYKKIAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQ 419
LV A S A P KA KKIAAI +R+L++P+ LLL +A+++P D + FVL+ME MP AQNSV+ILQ+ A +A++L + YL+ +PI+ LL+ LQ
Sbjct: 270 LVLAGSLANAKPQNIWTKATAKKIAAISMARWLLLPIATGALLLGCVKARIVPRDPALLFVLMMEAAMPPAQNSVIILQVSGLRNAAGRIARSLCIFYLVGVLPISALLTVFLQ 383
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: R1CQU2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQU2_EMIHU) HSP 1 Score: 74.7 bits (182), Expect = 1.090e-12 Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = 3
Query: 147 IAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQ 419
+ AI +RF +PL++ LL + RA ++P D L VLL++ CMPSAQNSV+ LQ++ PE A+ MA+ L +YL++A+P+A +LS +LQ
Sbjct: 372 VVAIAVARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMPSAQNSVLALQVDGSPERAARMARVLLAIYLIAALPVAGILSLLLQ 462
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A7S2V2A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2A0_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.320e-12 Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 3
Query: 147 IAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQ 419
I+ I RF++ PL+ A LL G + +D ++ FVL+M+ CMPSAQN+V+ILQ+E AS MA+ L ++YL+S VPI+ LLS LQ
Sbjct: 55 ISVISLGRFVLTPLLTAGLLRLGINLGLSLHDPVLLFVLMMQSCMPSAQNNVLILQVEGLKHAASRMAQMLLIIYLISIVPISVLLSIFLQ 145
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Match: A0A0G4EE60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE60_VITBC) HSP 1 Score: 72.8 bits (177), Expect = 3.450e-12 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 3
Query: 144 KIAAIMASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTVVYLLSAVPIAFLLSAILQ 419
++ A+ +RF VMP + ++ R +I D ++ F+LL+EGCMP AQN+VVILQ + + E A SMA+TL +Y LS VP+ FL+S IL
Sbjct: 235 QLPAVALARFGVMPAITFAVVRLAQRTSLIQADPVLMFLLLLEGCMPPAQNTVVILQKQGQREEAESMAQTLAAIYALSLVPLPFLISCILD 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14596.3537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14596.3537.1 >prot_H-canaliculatus_F_contig14596.3537.1 ID=prot_H-canaliculatus_F_contig14596.3537.1|Name=mRNA_H-canaliculatus_F_contig14596.3537.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=92bp MASRFLVMPLVAAMLLLSGARAKVIPYDKLVWFVLLMEGCMPSAQNSVVIback to top mRNA from alignment at H-canaliculatus_F_contig14596:103..2033+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14596.3537.1 ID=mRNA_H-canaliculatus_F_contig14596.3537.1|Name=mRNA_H-canaliculatus_F_contig14596.3537.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1931bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14596:103..2033+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14596:103..2033+ >mRNA_H-canaliculatus_F_contig14596.3537.1 ID=mRNA_H-canaliculatus_F_contig14596.3537.1|Name=mRNA_H-canaliculatus_F_contig14596.3537.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=552bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14596:103..2033+ (Hapterophycus canaliculatus Oshoro5f female)back to top |