mRNA_H-canaliculatus_F_contig14497.3482.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A6H5L3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y1_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.160e-25 Identity = 67/106 (63.21%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 4 VTSALHDELAYLLMEGLLVRCAGSALER---SRGVECHSR---LDPSVFRAEHRGHIGL---PPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVR 294
VTSALHDELAYLLMEGLLV G+A +R SR + S+ D + A +R + L YNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQ++
Sbjct: 308 VTSALHDELAYLLMEGLLVE-QGAAADRGQSSRRLGSSSKNTAKDKNGLAAAYRQRLQLFLQTSEKYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQLK 412
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: D7G8R8_ECTSI (CNH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R8_ECTSI) HSP 1 Score: 108 bits (271), Expect = 1.630e-25 Identity = 65/106 (61.32%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 EVTSALHDELAYLLMEGLLVRCAGSALERSRGVECHSRL-----DPSVFRAEHRGHIGL---PPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVR 294
EVTSALHDELAYLLMEGLLV G+A +R D + A +R + L YNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQ++
Sbjct: 788 EVTSALHDELAYLLMEGLLVE-QGAAADRXXXXXXXXXXKNIAKDKNGLAAAYRQRLQLFLQTSEKYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQLK 892
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A835YS55_9STRA (CNH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS55_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.180e-15 Identity = 51/119 (42.86%), Postives = 63/119 (52.94%), Query Frame = 1
Query: 7 TSALHDELAYLLMEGLLVRCAGSALERSRGVECHSRL--------------------DPSVFRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVRPTA 303
T+ LHDELAYLLMEG+L L+ + + S +R R + R Y+ ARLL+V+PSHFL EHALLLSRLGRH+ VLHIYV Q+R A
Sbjct: 727 TAPLHDELAYLLMEGVLAEQQQXXLDSAXXXXXSXXSXXXXSXXXXXXXXXXXXXXGEVSAYRRRLRTFLRAS-RSYSAARLLAVVPSHFLHEHALLLSRLGRHDAVLHIYVAQLRDAA 844
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A7S0GKL0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKL0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.740e-11 Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 1 EVTSALHDELAYLLMEGLLVRCAGSALERSRGVECHSRLDPSVFRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHI 276
E T LHDELAYLL+EG++ G + + E ++R + R + P Y LLS +PS FL+EHALLL +LGRHE+ L I
Sbjct: 116 ERTVCLHDELAYLLLEGVIGERGGDQDDFDQDTELGH-----IYRMKLRRLLAWPASKYRVEHLLSSLPSSFLQEHALLLGKLGRHEDALRI 202
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A6G0XXS8_9STRA (CNH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXS8_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.470e-11 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 1 EVTSALHDELAYLLMEGLLVRCAGSALERSRGVECHSRLDP-SVFRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVRPTA 303
E+ SALHDEL YLL + + S + S H + D V R + + P MY+P RLLS P LEE A+LL+ +GRHEEVL +Y+ +R A
Sbjct: 620 ELPSALHDELVYLLFDAIETERHKS--KTSLHARVHLQRDRLGVLRKQLLAFLQSPLAMYHPERLLSRTPMDLLEERAVLLANMGRHEEVLRLYLHDLRDAA 719
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: W4H9G2_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9G2_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 6.290e-11 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 1 EVTSALHDELAYLLMEGLLVRCAGSALERSRG--------VECHSRLDPSV--FRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVRPTA 303
E+ LHDEL YLL++ + A ++L + V H + DP + R + P MY+P RLLS +P LEE A+LL+ +GRHEEVL +Y+ +R A
Sbjct: 644 ELPLTLHDELVYLLLDA--IDAAATSLRKPHQNKKDSTFHVRVHLQRDPELGPLRRHLLTFLQSPLAMYHPERLLSRVPVDMLEERAVLLANMGRHEEVLQLYLHDIRDAA 752
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A485L712_9STRA (Aste57867_17068 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L712_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 8.600e-11 Identity = 40/104 (38.46%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 1 EVTSALHDELAYLLMEGLLVRCAGSALERSRGVECHSRLDPS---VFRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVRPTA 303
++ S LHDEL YLL++ + G +R L V R + P MY+P RLLS P LEE A+LL+ +GRHEEVL +YV +R A
Sbjct: 667 DIASTLHDELVYLLLDAI----DGQRQKRKDAFHPRVHLQKDRLGVLRKALLAFLQSPLAMYHPERLLSRTPPDMLEERAVLLANMGRHEEVLRLYVHDIRDAA 766
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A024UUQ4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.180e-10 Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 1 EVTSALHDELAYLLMEGLLVRCAGSALERSR-GVECHSRLDPSV--FRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIYVRQVRPTA 303
E+ S+LHDEL YLL++ + ++ V H + DP + R + P MY+P RLLS + LEE A+LL+ +GRHEEVL +Y+ ++R A
Sbjct: 622 ELPSSLHDELVYLLLDAIDTAQRNKTPKKEAFHVRVHLQRDPVLGPLRKHLLTFLQSPLAMYHPERLLSRMHVDMLEERAVLLANMGRHEEVLRLYLHEIRDAA 725
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: B8C9D8_THAPS (COP-gamma_platf domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9D8_THAPS) HSP 1 Score: 65.9 bits (159), Expect = 2.230e-10 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 16 LHDELAYLLMEGLLVRCAGSALERSRGVECHSRLDPSVFRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHIY 279
+HDEL+YLL+EG++ ER G + +++R + R + P M RLL+ +PS FL EHALLL R+GRHE+ L I+
Sbjct: 1085 MHDELSYLLLEGVIS-------ERGDGDDGEDSDLGAIYRYKLRRLLSWPNSMIRSERLLASLPSSFLREHALLLGRMGRHEDALRIF 1165
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Match: A0A7S2KHW2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KHW2_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.370e-9 Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 19 HDELAYLLMEGLLVRCAGSALERSRGVECHSRLDPSVFRAEHRGHIGLPPRMYNPARLLSVIPSHFLEEHALLLSRLGRHEEVLHI 276
HDEL YLL+EG++ GS + + ++++ R + P MY R+L+ +P+ FL EHALLL RLGRH+E L I
Sbjct: 175 HDELTYLLLEGVISEKKGSGRDELNLSK--------YYQSKLRRFLSWPGAMYRSERILASLPTSFLREHALLLGRLGRHDEALRI 252 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14497.3482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14497.3482.1 >prot_H-canaliculatus_F_contig14497.3482.1 ID=prot_H-canaliculatus_F_contig14497.3482.1|Name=mRNA_H-canaliculatus_F_contig14497.3482.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=101bp EVTSALHDELAYLLMEGLLVRCAGSALERSRGVECHSRLDPSVFRAEHRGback to top mRNA from alignment at H-canaliculatus_F_contig14497:495..1602- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14497.3482.1 ID=mRNA_H-canaliculatus_F_contig14497.3482.1|Name=mRNA_H-canaliculatus_F_contig14497.3482.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1108bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14497:495..1602- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14497:495..1602- >mRNA_H-canaliculatus_F_contig14497.3482.1 ID=mRNA_H-canaliculatus_F_contig14497.3482.1|Name=mRNA_H-canaliculatus_F_contig14497.3482.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=606bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14497:495..1602- (Hapterophycus canaliculatus Oshoro5f female)back to top |