mRNA_H-canaliculatus_F_contig14461.3464.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: D7FM83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM83_ECTSI) HSP 1 Score: 196 bits (499), Expect = 1.110e-59 Identity = 110/164 (67.07%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 4 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSIQ 495
GGKIINQ+QT+T TRVKLSQKNEFFPGT DRVALVQGE P +VAEAV +MLRRL EAARP PQAP GG + H G +AQV +RLLVPLAAGGLIIGRGGETIK IG+RTGARVILAGKDADV GVPSERLCSIQ
Sbjct: 140 GGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHE---------------GYGSGGLDGPHGRDAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQ 288
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE) HSP 1 Score: 197 bits (502), Expect = 1.550e-55 Identity = 111/167 (66.47%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 4 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSIQVRL 504
GGKIINQ+QT+T TRVKLSQKNEFFPGT DRVALVQGE P +VAEAV +MLRRL EAARP PQAP GG + H G +AQV++RLLVPLAAGGLIIGRGGETIK IG+RTGARVILAGKDADV GVPSERLCSIQ L
Sbjct: 210 GGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHDGYGSGGLDEPY---------------GRDAQVMIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADL 361
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A7S0VZV1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VZV1_9CRYP) HSP 1 Score: 74.3 bits (181), Expect = 4.860e-13 Identity = 55/162 (33.95%), Postives = 80/162 (49.38%), Query Frame = 1
Query: 7 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 492
G I +LQ+ T R+++S+ EFFPGT +RV L+ G+ +AV LR + Q +G + G+ H L + L+VP AA G+IIGRGGE ++ I +TG+RV LAGK+ +PG+P ERL S+
Sbjct: 46 GATIMELQSLTGCRMRVSKAEEFFPGTGERVVLMTGQ-----YDAVERCLRTV------ISQMYKGFSDLNSGVPH------------------PSLDAKPLQDLQGLKTITLVVPTAASGVIIGRGGENVRGIALKTGSRVQLAGKETLIPGLP-ERLLSV 177
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A7S1BNP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNP4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 9.530e-13 Identity = 53/163 (32.52%), Postives = 77/163 (47.24%), Query Frame = 1
Query: 7 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQ-APQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 492
G+ I+ LQ + R+KLSQ + FPGT +RV L+QGE V EAV +L ++ +A + A G S V ++ ++++LVP A G++IGRGG IK I +GAR+ LA KD SER+ +I
Sbjct: 172 GQSISDLQARSGCRIKLSQSGDTFPGTGERVCLIQGEGVNAVREAVALVLAKVRDAKEGQGEFAEDGTDSADVSSRQQRTR-------------------------SSTYVIKVLVPSPACGMLIGRGGSNIKSISESSGARIQLASKDEAASVATSERVVTI 309
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A7R9WB75_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB75_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.180e-10 Identity = 60/177 (33.90%), Postives = 85/177 (48.02%), Query Frame = 1
Query: 7 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARP-----NPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXAD-GLNAQVL-------VRLLVPLAAGGLIIGRGGETIKDIGSRTGARVI-LAGKDAD-VPGVPSERLCSI 492
G+ I++LQ ++ R+KLSQ + FPGT DRV LVQG V A+G +LR+L E RP Q QG + H + + G++A VL VRLLVP + G+IIGRGG +K + +G I L+ K+ + V SER+ +I
Sbjct: 237 GQTISELQARSSARIKLSQAGDCFPGTSDRVCLVQG-GLDGVKSAIGLVLRKLHELQRPPLTGIQQQTVQGPMATEEAQLHQMGGVLPGLVQSNSHPHLSSVGGSINERGVSAPVLSPSFAFVVRLLVPTPSCGMIIGRGGSNVKSMAETSGVTSIRLSPKENEAVLAATSERVVTI 412
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: W7TUC6_9STRA (Neuro-oncological ventral antigen 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUC6_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.550e-10 Identity = 78/212 (36.79%), Postives = 93/212 (43.87%), Query Frame = 1
Query: 4 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGE-------------------DPKMVAEAVGDMLRRLGEAARPNP-------------QAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLN-----------------AQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 492
GG IN LQ T R+KLSQ ++FPGTQDRV L+ GE + + A AV + R GE P GG XXXXXXXXXXXXXXXXX +DG A V+LL+ AAGGL+IGR G TIK + TG R+ LA KD V ER+ +I
Sbjct: 154 GGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGGVEDVSSKEAYREAGTRDGPGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXTSADSFSDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTI 365
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A4D9CUW7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUW7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 9.310e-10 Identity = 77/212 (36.32%), Postives = 93/212 (43.87%), Query Frame = 1
Query: 7 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGE-------------------DPKMVAEAVGDMLRRLGE----------------AARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQ---------------VLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 492
G IN LQ T R+KLSQ ++FPGTQDRV L+ GE + + A AV + R GE AR P A G G V XXXXXXXXXXXXXXX D N+ V+LL+ AAGGL+IGR G TIK + TG R+ LA KD + ER+ +I
Sbjct: 155 GATINVLQEKTGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGSVEDVSSIEVYREAGARDGPGAG-GSGRPVPAKEVXXXXXXXXXXXXXXXXXTSADSFSDGDESNSHGPRSEAPVEGVGRGSASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMITGERVVTI 365
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: K7FF08_PELSI (Uncharacterized protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FF08_PELSI) HSP 1 Score: 62.4 bits (150), Expect = 4.320e-9 Identity = 49/150 (32.67%), Postives = 70/150 (46.67%), Query Frame = 1
Query: 4 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDA 453
GG+ I QLQ T +KLS+ +F+PGT +RV LVQG AEA+ + + E R PQ S+V ++ A+ +L+VP + GLIIG+GG T+K I ++GA V L+ K A
Sbjct: 27 GGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-----TAEALNAVHNFIAEKVREIPQ------SVVKPESVNILQPQTTMNPD-----------------RAKQAKKLIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPA 148
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A3Q0HDQ6_ALLSI (RNA-binding protein Nova-2 n=2 Tax=Amniota TaxID=32524 RepID=A0A3Q0HDQ6_ALLSI) HSP 1 Score: 61.2 bits (147), Expect = 1.340e-8 Identity = 47/148 (31.76%), Postives = 67/148 (45.27%), Query Frame = 1
Query: 4 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGK 447
GG+ I QLQ T +KLS+ +F+PGT +RV LVQG AEA+G + + E R PQA + + + +L+VP + GLIIG+GG T+K I ++GA V L+ K
Sbjct: 25 GGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-----TAEALGAVHSFIAEKVREIPQAVAKPDPVGI------------------------LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK 143
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: F7ACQ0_XENTR (Neuro-oncological ventral antigen 2 n=7 Tax=Xenopus TaxID=8353 RepID=F7ACQ0_XENTR) HSP 1 Score: 63.2 bits (152), Expect = 1.400e-8 Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 1
Query: 4 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVL--VRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDA 453
GG+ I QLQ T +KLS+ +F+PGT +RV LVQG AE++ + + E R + PQGG +G+ +NA+ +L+VP GLIIG+GG T++ I +GA V L+ K A
Sbjct: 73 GGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGS-----AESLLSVHNFIAEKVR---EVPQGGTKNDLGV-----------------------LLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKPA 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14461.3464.1 >prot_H-canaliculatus_F_contig14461.3464.1 ID=prot_H-canaliculatus_F_contig14461.3464.1|Name=mRNA_H-canaliculatus_F_contig14461.3464.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=168bp QGGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDback to top mRNA from alignment at H-canaliculatus_F_contig14461:207..2564+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14461.3464.1 ID=mRNA_H-canaliculatus_F_contig14461.3464.1|Name=mRNA_H-canaliculatus_F_contig14461.3464.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2358bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14461:207..2564+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14461:207..2564+ >mRNA_H-canaliculatus_F_contig14461.3464.1 ID=mRNA_H-canaliculatus_F_contig14461.3464.1|Name=mRNA_H-canaliculatus_F_contig14461.3464.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1008bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14461:207..2564+ (Hapterophycus canaliculatus Oshoro5f female)back to top |