mRNA_H-canaliculatus_F_contig1442.3451.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1442.3451.1
Unique NamemRNA_H-canaliculatus_F_contig1442.3451.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: D7FSP6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP6_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 1.590e-129
Identity = 194/229 (84.72%), Postives = 216/229 (94.32%), Query Frame = 1 
Query:    1 QGDLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQHLAV 687
            QGDL+G+RR LLPFTA QVA SRRA+  RLDL+ P GFT THMY +RKVLQRLPRHVTTLTEQRASV++PLCNVDGVASVLFTKRS  MRA+KN+VCFPGGKVDIGQDQHII+TA+REMGEEIGI ESSVDVLGVLRCDW+EVASLIGVAVTPVVGFLGNLS+EQI+PNPDEVSHCFTIP+R+LL++DRW+++KY APAFVGGPYQIWGLTGYILHRLVNDV+RQHLAV
Sbjct:  324 QGDLSGVRRVLLPFTAKQVAESRRALG-RLDLE-PEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIETAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILHRLVNDVLRQHLAV 550
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A6H5JIG8_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG8_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 1.050e-127
Identity = 193/229 (84.28%), Postives = 213/229 (93.01%), Query Frame = 1 
Query:    1 QGDLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQHLAV 687
            QGDL+G+R+ LLPFTA QVA SRRA+  RLDL+ P GFT THMY +RKVLQRLPRHVTTLTEQRASV++PLCNVDGVASVLFTKRS  +RA+KN+VCFPGGKVDIGQDQHIIQTA+REMGEEIGI ESSVDVLGVLRCDW+EVASLIGVAVTPVVGFLGNLS EQI+PNPDEVSHCFTIP+R+LLQ+DRW++ KY APAFVGGPYQIWGLTGYIL RLVNDV+RQHLAV
Sbjct:  314 QGDLSGVRKVLLPFTAKQVAESRRALG-RLDLE-PEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNLRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLQEDRWQVNKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAV 540
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A7S2USV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USV2_9STRA)

HSP 1 Score: 233 bits (595), Expect = 4.400e-68
Identity = 110/224 (49.11%), Postives = 159/224 (70.98%), Query Frame = 1 
Query:    7 DLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQH 678
            +L  LR+ L PF  + +   R   R   D++   GF   H++ +RK L R+PR ++    +RA+V++ LCNVDGV S+LF+KRS  + +HKNEVCFPGG VD  QD ++++T LRE+ EEIGI +++V++LGVLRCDW EV S++GVAVTPVVGF+ +LS +++ PNPDEVS+CF++PI+ LL++  W   +Y    F GGPY IWGLT YIL   + +V+ ++
Sbjct:  148 ELDELRKLLRPFHHSNLERHRTKKR---DMNLSEGFQAKHLHMIRKYLHRMPRQISRSASRRAAVLLTLCNVDGVPSILFSKRSDKVTSHKNEVCFPGGHVD-EQDDNVVETCLREVREEIGIPDTTVEILGVLRCDWGEVESIVGVAVTPVVGFIDDLSLKKLKPNPDEVSNCFSVPIKSLLKRKNWVSGEYSKHVFTGGPYLIWGLTAYILDTFLKEVLMRY 367
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A4D9DAL0_9STRA (Nudix hydrolase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAL0_9STRA)

HSP 1 Score: 229 bits (583), Expect = 3.830e-67
Identity = 117/226 (51.77%), Postives = 154/226 (68.14%), Query Frame = 1 
Query:    4 GDLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPA-FVGGPYQIWGLTGYILHRLVNDVIRQH 678
            G+L  L R L P+ A  +   RR  R    LD   G T+ H+  +RK LQR PR +T     RASVVIPLCNV+GVASVLF +RS  +R+ KN+VCFPGG V+   D +II+T+LREM EEIG    SVDVLGVLRCDW+EV  + G+ VTPVVGFLG+L+ ++++PNP EV+ CFTIP+  LL  + W  E+ K    FVGGP+ IWGLT ++L   + D++ ++
Sbjct:   95 GNLEQLERVLHPYQAELITRRRRKTR---SLDLAGGLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKNQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRY 317
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A7S3MB31_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB31_9STRA)

HSP 1 Score: 224 bits (571), Expect = 3.990e-66
Identity = 110/222 (49.55%), Postives = 147/222 (66.22%), Query Frame = 1 
Query:    4 GDLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVI 669
            G+   L+  L+PF    V   RR     LDL    GFT   +  +++ L R+PRHV    E+RASV+IPLCNV+GVASVLF +RS  +R HK +VCFPGG +D G D  IIQT+LREM EE+GI    ++VLG+LRC+W EVAS+ G+AVTPV+GF+G L+   + PN DEV   FTIP+  LL + +W    +  P F GGP+ IWGLT Y+L + + +V+
Sbjct:   39 GETEELKELLVPFLDESVE-RRRLRHHHLDLSK--GFTRKEIVILQRYLHRMPRHVFHNAERRASVIIPLCNVNGVASVLFERRSMKVRTHKQQVCFPGGMLDEGVDSTIIQTSLREMEEELGIPREKIEVLGILRCNWNEVASMTGIAVTPVIGFIGELNDLVLTPNSDEVEQYFTIPLDDLLDEQKWLTRNFSTPVFTGGPHTIWGLTAYLLEKFLKEVV 257
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A482SUV1_9ARCH (CoA pyrophosphatase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUV1_9ARCH)

HSP 1 Score: 223 bits (568), Expect = 1.380e-64
Identity = 106/225 (47.11%), Postives = 148/225 (65.78%), Query Frame = 1 
Query:    1 QGDLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQ 675
            QGD   L+  L PF    +  SR  MR     D  +GF+   +  ++  L R+PR+V   +E+RASVVIPLCNV G+ S+LF +RS+T+R HK +VCFPGG V+ G D  +I+T LREM EE+G+     +VLG+LRC+W EVAS+ G+AVTPVVG++G L    + PN DEV   FT+PI  ++ + +W    +  PAF GGP+ IWGLTGY+L R   D++++
Sbjct:  128 QGDFERLKNLLFPFLKKNIEQSR--MR-NFSFDLSNGFSRKALLLIQGYLHRMPRYVYHGSERRASVVIPLCNVQGIPSILFERRSATVRTHKQQVCFPGGMVEYGVDASVIETCLREMEEELGVPSDKTEVLGILRCNWNEVASMTGIAVTPVVGYIGELKDITLKPNADEVEKYFTVPIHEIMDEKKWLSSSFTTPAFTGGPHTIWGLTGYLLERFRRDILQK 349
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A7S0CGN4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGN4_9STRA)

HSP 1 Score: 214 bits (546), Expect = 5.120e-63
Identity = 101/191 (52.88%), Postives = 134/191 (70.16%), Query Frame = 1 
Query:  109 GFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEI-GIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQH 678
            GF T  +  +RK L R+PR VT    +RASVV+PLCNV G+  +LF KR+  +RAH +EVC PGG V    D  I+ T+LREM EEI GI   +V VLG+LRC+W EVA + G+AVTPVV F+G+L    ++PNPDEV+ CFT+P+   L+ DRW  ++  AP F GGP+ IWGLTGYI++R V DV+ ++
Sbjct:    9 GFDTASLEMLRKGLMRMPRQVTQAHNKRASVVLPLCNVGGIPCILFEKRAGHLRAHPDEVCLPGGMVSENDDPSIVSTSLREMEEEIVGIHRDNVSVLGILRCNWGEVAQITGIAVTPVVCFIGDLDEMNLHPNPDEVAECFTVPLSSFLEHDRWIHKENCAPIFTGGPHVIWGLTGYIVNRFVKDVLARY 199
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BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A7S2EIB7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIB7_TRICV)

HSP 1 Score: 214 bits (544), Expect = 4.560e-62
Identity = 115/227 (50.66%), Postives = 142/227 (62.56%), Query Frame = 1 
Query:    1 QGDLTGLRRALLPFTATQVALSRRAMRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEI-GIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQH 678
            Q  L  LR  LLPF    V + RR    RLDL          +  +RK L R+PR V     QRA VV+PLC+V G+  VLF KRS  +RAH +EVC PGG V IG D+ I+ T LREM EEI G+ +  V VLGVLRC+W EV  L GVAVTPVV ++G +    + PN DEV+ CFT+P+  +L +DRW   +  AP F GGPY IWGLTGYIL R V DV+ ++
Sbjct:   33 QDRLDELRDVLLPFERRFVEM-RRKRETRLDLRASGFGNLASLEMLRKGLGRMPRRVGLAHRQRAGVVLPLCDVGGIPCVLFEKRSRHLRAHPDEVCLPGGMVSIGDDKSIVSTCLREMYEEIDGLDQGLVTVLGVLRCNWGEVHHLTGVAVTPVVCYVGEIGHMDLKPNADEVAECFTVPLEAILDRDRWVHRQNFAPIFTGGPYIIWGLTGYILERFVKDVLARY 258
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: A0A7S2GLJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLJ1_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.480e-61
Identity = 96/178 (53.93%), Postives = 119/178 (66.85%), Query Frame = 1 
Query:  136 VRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVI 669
            +RK L R+PR VT    QRASVV+PLCNV+GV S+LF KR+  +R H  EVCFPGG V  G D  I+ T LREM EE+G+ E    VLG+LRC+W E+  + G+AVTPVVGF+G L  + + PN DEVS CFT+PI  +L  + W       P F G PY IWGLT YIL R + DV+
Sbjct:    6 LRKALNRMPRQVTKAHRQRASVVLPLCNVNGVPSILFEKRALELRKHPGEVCFPGGMVSEGDDHTIVDTCLREMCEEVGLNEQKTKVLGILRCNWGEITGITGIAVTPVVGFVGKLEHDSLRPNGDEVSECFTVPIADILNPEHWMHPADSPPIFTGAPYVIWGLTAYILDRFIQDVL 183
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Match: B8CB77_THAPS (Nudix hydrolase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB77_THAPS)

HSP 1 Score: 220 bits (561), Expect = 2.560e-61
Identity = 104/193 (53.89%), Postives = 134/193 (69.43%), Query Frame = 1 
Query:  109 GFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVDGVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGIRESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSHCFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQHLAV 687
            GF    +  +RK L R+ R V+T   +RA VV+PLCNVDGV  +LF KRS  +RAH +EVC PGG V  G D+ I+QT LREM EEIGI  ++  VLGVLRC+W EV  L+GVAVTPVV ++G +   Q+NPN DEV+  FT+P+   L +DRW  +K+ AP F G P+ IWGLTGYI+HR V D+I ++  V
Sbjct:  355 GFDNQSIELIRKGLNRMHRRVSTAHSKRAGVVLPLCNVDGVPCILFEKRSRDLRAHPDEVCLPGGMVSEGGDKSIVQTCLREMEEEIGIEHNAASVLGVLRCNWGEVHHLVGVAVTPVVCYIGQVGMSQLNPNSDEVAEVFTVPLELFLDRDRWVHKKHYAPFFTGSPHIIWGLTGYIIHRFVMDIIERYTVV 547
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1442.3451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSP6_ECTSI1.590e-12984.72Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6H5JIG8_9PHAE1.050e-12784.28Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2USV2_9STRA4.400e-6849.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9DAL0_9STRA3.830e-6751.77Nudix hydrolase domain-containing protein n=3 Tax=... [more]
A0A7S3MB31_9STRA3.990e-6649.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SUV1_9ARCH1.380e-6447.11CoA pyrophosphatase (Fragment) n=1 Tax=archaeon Ta... [more]
A0A7S0CGN4_9STRA5.120e-6352.88Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2EIB7_TRICV4.560e-6250.66Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2GLJ1_9STRA1.480e-6153.93Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
B8CB77_THAPS2.560e-6153.89Nudix hydrolase domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1442contigH-canaliculatus_F_contig1442:22233..26710 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.2
Seed ortholog evalue6.4e-100
Seed eggNOG ortholog2880.D7FSP6
KEGG koko:K18665
EggNOG free text desc.CoA pyrophosphatase activity
EggNOG OGsCOG0494@1,KOG3069@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNUDIX hydrolase domain
Ec32 orthologEc-03_003030.1
Exons6
Model size1601
Cds size618
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1442.3451.1prot_H-canaliculatus_F_contig1442.3451.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1442 23141..26635 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929196.2602801-UTR-H-canaliculatus_F_contig1442:22232..231401622929196.2602801-UTR-H-canaliculatus_F_contig1442:22232..23140Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1442 22233..23140 -
1696845713.2809098-UTR-H-canaliculatus_F_contig1442:22232..231401696845713.2809098-UTR-H-canaliculatus_F_contig1442:22232..23140Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1442 22233..23140 -
1622929196.3777003-UTR-H-canaliculatus_F_contig1442:26635..267101622929196.3777003-UTR-H-canaliculatus_F_contig1442:26635..26710Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1442 26636..26710 -
1696845713.3543675-UTR-H-canaliculatus_F_contig1442:26635..267101696845713.3543675-UTR-H-canaliculatus_F_contig1442:26635..26710Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1442 26636..26710 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929196.278779-CDS-H-canaliculatus_F_contig1442:23140..232671622929196.278779-CDS-H-canaliculatus_F_contig1442:23140..23267Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 23141..23267 -
1696845713.2914088-CDS-H-canaliculatus_F_contig1442:23140..232671696845713.2914088-CDS-H-canaliculatus_F_contig1442:23140..23267Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 23141..23267 -
1622929196.294407-CDS-H-canaliculatus_F_contig1442:23622..236721622929196.294407-CDS-H-canaliculatus_F_contig1442:23622..23672Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 23623..23672 -
1696845713.3000648-CDS-H-canaliculatus_F_contig1442:23622..236721696845713.3000648-CDS-H-canaliculatus_F_contig1442:23622..23672Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 23623..23672 -
1622929196.3124602-CDS-H-canaliculatus_F_contig1442:24143..242721622929196.3124602-CDS-H-canaliculatus_F_contig1442:24143..24272Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 24144..24272 -
1696845713.3115199-CDS-H-canaliculatus_F_contig1442:24143..242721696845713.3115199-CDS-H-canaliculatus_F_contig1442:24143..24272Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 24144..24272 -
1622929196.331109-CDS-H-canaliculatus_F_contig1442:24804..248851622929196.331109-CDS-H-canaliculatus_F_contig1442:24804..24885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 24805..24885 -
1696845713.3232307-CDS-H-canaliculatus_F_contig1442:24804..248851696845713.3232307-CDS-H-canaliculatus_F_contig1442:24804..24885Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 24805..24885 -
1622929196.3502316-CDS-H-canaliculatus_F_contig1442:25190..253051622929196.3502316-CDS-H-canaliculatus_F_contig1442:25190..25305Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 25191..25305 -
1696845713.334097-CDS-H-canaliculatus_F_contig1442:25190..253051696845713.334097-CDS-H-canaliculatus_F_contig1442:25190..25305Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 25191..25305 -
1622929196.3650362-CDS-H-canaliculatus_F_contig1442:26519..266351622929196.3650362-CDS-H-canaliculatus_F_contig1442:26519..26635Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 26520..26635 -
1696845713.3426027-CDS-H-canaliculatus_F_contig1442:26519..266351696845713.3426027-CDS-H-canaliculatus_F_contig1442:26519..26635Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1442 26520..26635 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1442.3451.1

>prot_H-canaliculatus_F_contig1442.3451.1 ID=prot_H-canaliculatus_F_contig1442.3451.1|Name=mRNA_H-canaliculatus_F_contig1442.3451.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=206bp
MRMRLDLDDPHGFTTTHMYTVRKVLQRLPRHVTTLTEQRASVVIPLCNVD
GVASVLFTKRSSTMRAHKNEVCFPGGKVDIGQDQHIIQTALREMGEEIGI
RESSVDVLGVLRCDWAEVASLIGVAVTPVVGFLGNLSREQINPNPDEVSH
CFTIPIRYLLQQDRWKLEKYKAPAFVGGPYQIWGLTGYILHRLVNDVIRQ
HLAVN*
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mRNA from alignment at H-canaliculatus_F_contig1442:22233..26710-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1442.3451.1 ID=mRNA_H-canaliculatus_F_contig1442.3451.1|Name=mRNA_H-canaliculatus_F_contig1442.3451.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4478bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1442:22233..26710- (Hapterophycus canaliculatus Oshoro5f female)
CAGGGAGACCTCACTGGTTTGCGGAGAGCCCTCCTACCCTTCACGGCGAC
GCAGGTAGCCCTGAGCCGCCGGGCTATGCGTATGAGACTGGACCTGGACG
ATCCCCATGGGTTCACCACCACGCACATGTACACCGTGCGGAAGGTGCTG
CAGCGGCTACCACGACACGTTACCACGCTCACGGAGCAGAGGTTCGTACC
CCTTTTTTTGTTGCTCGCTGTTGTCTCGCGATGGTGAATGGGGAGGGACG
AGCCGAGGTTCGCGGGGGGTGTCTGTGGTGTTGGATGTTGCTCGAAGTGG
CACGGACACGGAAAAGCAGCTTCCATACAAGATATACAGGCTACGCGGAA
TGAAAACCGTGCGGGATAGGGGCTCCATTCAGGTTGGCATGTGTTCACAA
GCAAACGGAATCCCGGTTACGAATTACAGAGCCACGACGGCACGAGTGCG
AATACGCCTCCTCGGTACGCGCACCGCCTGGACTCGACGAAAAATTAGTA
CTGTTCGGACTGGTGGCACGCGCGGTAAGACCACTCTCCTCGTCCGCTGT
CGAAGTCGGTTGAGGCGGGCACGGCGAAGGGCGACTCACAGTTCCGCTTT
TCGAAAAGAAAAACATAGCAAACCCGTTGGAACACCTCCTGAGGTACGTC
GTGCGAGGCGTAGCTCGAGAACTCTGTTGAGCTCCAAGCGATGAGAATTC
ATTGATGTGTAAGGTTGGTACAAAAACATGAACATACAAGAGTTTTGGGT
AAGTTAACGCAATTTGTACAAACTTGGAACTTGTTATCATCGTGAAATAG
GCCATAAAATATATGTTCATGTAGACTCTCGAAAAATGCTTCCTGTGATG
AGACACGAAGACGTCAAGCAAGTGAAAGAGTTTACTGCAGTCCAGGAAGT
ACTTGGTATAGCCCGTCCCGAGAGCATTTCAGTGGCGAAGCAGAAAGAAG
CAGATAGTGACCCGGACGAGAAGATGCATGCAGGCGACTATCTTCATCAT
CAGCGGTTGTACAAGTTGTACTACCGATGAAAACACCTGTATGCACTCAA
GCGTGGTTGGAAGGAGAGATCTTGGGACAAGATGTTTTTGTTTTTAAGAA
AGCATAACAACACCGTTGGGATACCTCCTGAGGTACGTCTTGTGAGCCAT
AGCTTGAGGCTTCTGTTGAGCTCCAAACAATGAGGGTTCACTGAGGGTAA
CGTTGGGACAAAAGTATGAACATAACAGATATTTGTGCAAGTTACTGCGA
TTCCATGTAGTTGTCGTCCAGTTTTTGCGACGGCTTGCGGTCTCGAGATC
TCGAATCCGAAACTGTTTCTCTGGTACTATAAGCGAAGAGACGGCTGCCG
TTTCACACGACCGCTCCGCTTGTCTACCCCCGGCGCTCTCCCCATCCTTC
ACCAGGGCCTCCGTGGTGATTCCTTTGTGCAACGTGGACGGGGTGGCGTC
TGTCCTCTTCACCAAGCGCTCAAGCACCATGAGGGCTCACAAGAACGAGG
TCTGCTTCCCGGGGGGCAAGGTGAGGCTGATTCCGTCCGTGTTTTGCGGT
CCTGTTCCATCCTTATCTCTGTGCGTCAACGGGAATTAAGCTCTAGGCCA
ACGCGTGTGCCGCGTTCTAGGGTTGAGGTTCGTGGCCAAGGGTCCGATGG
GCTTCAGTGTCCGACGCAGGCTAGTCTTTGCCTATCATGGACGCGTCGAC
GAACGAATCAGACGAAGAAAACGAAGCGTGGAATGATCGACACCGCCTGC
TGGCTGGCCAACGCGCTGCCGTTCTTTTCGCACTGGGTCTTGTCTCGATG
GCGACAAAATGGAACGAAAGAACAGGTGGACATCGGTCAGGATCAACACA
TCATTCAGACGGCTCTCAGAGAAATGGGGGAGGAGATCGGCATCCGCGAG
TCCTCGGTAAGATGGAGGGAGCGGGTGCGCGTGCCCCCCCAATGGCCTTG
AAAGACTGAGAAGGTGTTCGTGCGCGCTTGTGTTTCGCCTTTGAACGGGG
TCTTTGGTTCGCCCGTCCTCGCGCTCGTGCTTGAGAGTCGCTCCAAAGAG
ATATTGAAGATCTGACAAAGGAAAGACACCTCACGATACCGTCTAGTCCA
CAACGTTTGGCCAAAACCCGACGACCTTCTTGTTTGGCATTCCCACCGTA
TTTTTCTCGGACTGTTTCTCTTCTCGTGTCAAGAAGTCTGGGGTAGATCC
GTATGCCATGTCGAGTTCGAATTGGAAACCATTCCGTTCTCCTCCTCTCA
TCATCAGACTTTTGTCCCCTGGTCGTTCCCACACACCACTTTTCGACCAA
CTTCTGTCGCGCCCAGTATCGTCCATTTACTTGTTTCTCCTGGACATCGT
CAATGAATATGAGTAACTCCATCCAAAACATGAGCATTCCCAACGTCTTT
CCATGTCTTCTTTTTGCCTCCCACCGTTCCGAGCCCAGGTTGACGTGCTC
GGGGTGCTCCGCTGCGACTGGGCCGAGGTAGCCTCTCTCATTGGAGTGGC
TGTCACACCCGTGGTCGGGTTCCTGGGAAACCTTTCCCGGGAGCAGATCA
ACCCCAACCCCGACGAGGTTAGACTTTGCTGTATCTTTTGATCGTGCATC
GATGCGGCCGATTTCATGGCGCGGTTTGTCTTGGATCCGCGTGACGGAAA
TCGAGGTTTCTCCTTCCATGCTAGACATGTGCGATGCAATCGGTCACGGC
GCAGAGGGGTTTCTTCCTCCTTCCTTATTTTTTGTCTGCGTGTGGAAGAG
TTTGTACGGTTTTGCCTCGATGCATGGACGGCATCGATGAGTATATGGAC
CCCGTTGGGCTCTGAACACTACGGAGCCTTGATCCCCACCCCACGTGTTG
AGCATCAACGCGACGGCACACCTTTATGGCATCGGTCGCTGATCCGCGCT
TGTCGTTTAGCGCCTCCACGACCCCTGCGACGTGTTGTTTTTATATCGAG
AAACGCAGACCACGACAACCTTCGTTCAACCTGCTGCTGCCGCCGCACCC
GCCCTCTTTCGTTGTGCCCTTCCTTCAAACGTTCCCAGGTGTCTCACTGC
TTCACAATACCCATCCGGTACCTTTTGCAGCAGGATAGGTGAGCGGTAGA
TCATAACCATCTCGTTGCAGTCTGAGCGGCCGGATGTGGTCTCCTTGACA
CTTGCTTCTTCAACTGCCGATTCCGTGATGAACCAGGCTACACCCAGCGA
AGGCATGAACATGGTCGCTTAGATCGGGCATAAACCCCAACATATACCAG
AAAGTGGCTCTGCAGGAAAATAGGGAGTCGCGGCAATACCGAAGGAGATC
TTGCGGCCCACAATTTTACAACGCCAGCCACACATCTAAAGTGCTCTCTA
ACCCCACCGTTACCCTATGAAACGAAGTAAAACCGAGCCAAACCAAGCCA
AACGGTGTTCTGCTCCATCGCACATGATGGATCGTACTTTCAGGTGGAAG
CTGGAGAAGTACAAGGCGCCGGCCTTTGTGGGCGGGCCTTACCAGATCTG
GGGGCTAACGGGATATATCCTGCACCGCCTGGTCAACGACGTCATCCGCC
AACACCTTGCCGTCAATTAGTTTTTTCTTCGCAGTCATGGCGGGCCGGTC
GAATCCGGAATGCGTACAAGTATGTCTGCCGTATCCAGGCCTTCTGAGAA
TCTTCGGTCTATTCTCGAAGACGTGTCGATATATATGTTTTCCGTCCGGC
GCTCCTTCCAGCCAGGGCCGAACGTCGGCAAATATGTTTGGGGTTGGTAG
ATCAGGGATGTCTAGGACACGCCTGTATTCCTTGTCGTGCTCGTATACCA
TGGTACATGGTTGAGTTTTTGTCTGTTTTGAATAATACTTCAGTCTCCCT
GGCTGGTCCTGTGTCGCTCGACCGTCGGAAAAGACTCCTAGAACCCTTGG
GGTGTACCTAGTTGTGTTTTGATTGTCGTGAGGCCTCTAGAATATATTCC
AGGCCATAAATTGTGCATAAAGGGCTAAACACATGAGTGATTGGAGTCGT
TTTGCGTTGCTCATCTTGGTGAAAATATGCATCACTGGATTATTTTTGTA
TGGTTCGTTTGCGTGGATAATGTGCAACCGAATTTTGTCGGACAAGTAAT
GTGAGTTGGAAGAACACCTCGGAGTTGTGTGCAAAGCGCGCGCTAGTCGA
AGCATATACCGCTGGCCATCGGATGACAATCGCAGGGTTGTGTCGTGTTC
GATCAGCGCATGGTCGTCGTGAAGCTTCGTTTCGATACATGGCGGCGCAA
CGAAAGCCACGAAGAACCCTGCCTCAGGAGCAACAGCACTTTCGCCCCAA
CCCAACAGAGACTGGGGGCGAGTTGTAGGAAGAAGGATGGAAAAGGCGCG
AGAAGGGCAGGGTGCGAGTCTGAAAGTTTCGTGCAAAGTCGACCGTCAGG
GATGATCACGTGGACCATTTTTTTTAAAGCGCCCGTGCAGGGCTGTTCAA
TTTCAAGACCCCATCTCGGAGGCCGGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1442:22233..26710-

>mRNA_H-canaliculatus_F_contig1442.3451.1 ID=mRNA_H-canaliculatus_F_contig1442.3451.1|Name=mRNA_H-canaliculatus_F_contig1442.3451.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1236bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1442:22233..26710- (Hapterophycus canaliculatus Oshoro5f female)
ATGCGTATGAGACTGGACCTGGACGATCCCCATGGGTTCACCACCACGCA
CATGTACACCGTGCGGAAGGTGCTGCAGCGGCTACCACGACACGTTACCA
CGCTCACGGAGCAGAGATGCGTATGAGACTGGACCTGGACGATCCCCATG
GGTTCACCACCACGCACATGTACACCGTGCGGAAGGTGCTGCAGCGGCTA
CCACGACACGTTACCACGCTCACGGAGCAGAGGGCCTCCGTGGTGATTCC
TTTGTGCAACGTGGACGGGGTGGCGTCTGTCCTCTTCACCAAGCGCTCAA
GCACCATGAGGGCTCACAAGAACGAGGTCTGCTTCCCGGGGGGCAAGGGC
CTCCGTGGTGATTCCTTTGTGCAACGTGGACGGGGTGGCGTCTGTCCTCT
TCACCAAGCGCTCAAGCACCATGAGGGCTCACAAGAACGAGGTCTGCTTC
CCGGGGGGCAAGGTGGACATCGGTCAGGATCAACACATCATTCAGACGGC
TCTCAGAGAAATGGGGGAGGAGATCGGCATCCGCGAGTCCTCGGTGGACA
TCGGTCAGGATCAACACATCATTCAGACGGCTCTCAGAGAAATGGGGGAG
GAGATCGGCATCCGCGAGTCCTCGGTTGACGTGCTCGGGGTGCTCCGCTG
CGACTGGGCCGAGGTAGCCTCTCTCATTGGAGTGGCTGTCACACCCGTGG
TCGGGTTCCTGGGAAACCTTTCCCGGGAGCAGATCAACCCCAACCCCGAC
GAGGTTGACGTGCTCGGGGTGCTCCGCTGCGACTGGGCCGAGGTAGCCTC
TCTCATTGGAGTGGCTGTCACACCCGTGGTCGGGTTCCTGGGAAACCTTT
CCCGGGAGCAGATCAACCCCAACCCCGACGAGGTGTCTCACTGCTTCACA
ATACCCATCCGGTACCTTTTGCAGCAGGATAGGTGTCTCACTGCTTCACA
ATACCCATCCGGTACCTTTTGCAGCAGGATAGGTGGAAGCTGGAGAAGTA
CAAGGCGCCGGCCTTTGTGGGCGGGCCTTACCAGATCTGGGGGCTAACGG
GATATATCCTGCACCGCCTGGTCAACGACGTCATCCGCCAACACCTTGCC
GTCAATTAGGTGGAAGCTGGAGAAGTACAAGGCGCCGGCCTTTGTGGGCG
GGCCTTACCAGATCTGGGGGCTAACGGGATATATCCTGCACCGCCTGGTC
AACGACGTCATCCGCCAACACCTTGCCGTCAATTAG
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