prot_H-canaliculatus_F_contig1441.3446.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1441.3446.1
Unique Nameprot_H-canaliculatus_F_contig1441.3446.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length1007
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1441.3446.1 vs. uniprot
Match: A0A6H5JE26_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE26_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 2.800e-99
Identity = 170/245 (69.39%), Postives = 195/245 (79.59%), Query Frame = 0 
Query:    6 DEVDIEAFWDHVQRATGSRSASWATFSSLFETYLRTNYAAEMSQLPAATRAEPEMILRYAFERGSATRAAAGERICPEHLTLFLSRFGPMRWCLIKAARSIFDESGCLVPWFHGKISSGEAQRAVEEWEASNQDGRNQRGAFLFRYGD-RLAIRFSFRRRSGEERLATCLVENEGERGYTLPGSEDDVYWPDLQAFVAERGRGDFLHPVPSALYLECTEEIESRRRAQQM---SESQMAYERQFF 246
            DE D  AFWD VQR TG+RSASW TFS+ FETYLR +YAAEMSQLP ATRAE EM+LRYAF+RGS  RAAAGER+ P+HL LFL+RFGPM+ CLIKAARS+FDESGCLVPWFHGK+S  EA+RA+EEWEAS  +GR QRG FLFRY D    I FSFRR+ GE RL TCL+ NEG RGYTLP +  D  W DL+ FVAE+ RGDF HPVPSAL+ EC EEIE+RRRA+Q     E+Q+A+ RQ F
Sbjct:    4 DEADTRAFWDLVQRTTGARSASWDTFSATFETYLRRHYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMKSCLIKAARSLFDESGCLVPWFHGKLSREEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKKGERRLVTCLINNEGRRGYTLPDTSGDGCWRDLREFVAEQRRGDFRHPVPSALHRECVEEIEARRRAEQFVPTPENQIAHARQLF 248
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BLAST of mRNA_H-canaliculatus_F_contig1441.3446.1 vs. uniprot
Match: D8LBM4_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM4_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 2.200e-98
Identity = 171/248 (68.95%), Postives = 195/248 (78.63%), Query Frame = 0 
Query:    6 DEVDIEAFWDHVQRATGSRSASWATFSSLFETYLRTNYAAEMSQLPAATRAEPEMILRYAFERGSATRAAAGERICPEHLTLFLSRFGPMRWCLIKAARSIFDESGCLVPWFHGKISSGEAQRAVEEWEASNQDGRNQRGAFLFRYGD-RLAIRFSFRRRSGEERLATCLVENEGERGYTLPGSEDDVYWPDLQAFVAERGRGDFLHPVPSALYLECTEEIESRRRAQQM---SESQMAYERQFFEES 249
            DE D  AFWD +QR TG+RSASW TFS+ FETYLR  YAAEMSQLP ATRAE EM+LRYAF+RGS  RAAAGER+ P+HL LFL+RFGPMR CLIKAARS+FDESGCLVPWFHGK+S  EA+RA+EEWEAS  +GR QRG FLFRY D    I FSFRR+ GE RL TCL+ NEG RGYTLP +  D  W DL+ FVAE+ RGDF  PVPSAL+ EC EEIE+RRRA+Q     E+Q+AY RQ F E+
Sbjct:    4 DEADTRAFWDLMQRTTGARSASWDTFSATFETYLRRYYAAEMSQLPRATRAEAEMVLRYAFDRGSPARAAAGERVAPKHLALFLTRFGPMRSCLIKAARSLFDESGCLVPWFHGKLSRDEARRAIEEWEASRGNGREQRGVFLFRYSDWHSTICFSFRRKRGERRLVTCLINNEGSRGYTLPDTSGDGCWRDLREFVAEQRRGDFQQPVPSALHRECVEEIEARRRAEQFVPTPENQIAYARQLFGEA 251
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1441.3446.1 vs. uniprot
Match: A0A6H5L6Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z9_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.060e-41
Identity = 106/342 (30.99%), Postives = 154/342 (45.03%), Query Frame = 0 
Query:  721 SLRQFWLQSCGD-INPGRMSSTCGVALSMHSVTRRPLRDASDEAPSRKGPARALHVPPGGMSGRGVLFQTWRDEHGQIEIKATPRDRHHVEGVRLLNKVSMDEVSRR-------------------------------------------------------GETGSCLMSPIISGPTTASFLPGTASVSYYLGRYDVLVKTEGPKGGKRGMEEYLRDTFFPVMKVGRERYFPAMEEGKLSTRWEGTGDFKIAWKGDEVWLETELLHFCEVAVARKRGFRFKPWGRSGRERLPTPDAPRSSGRAEEAIQEGPLGLGALGSPLGSDPFQGGTVRFQNATKVCH 1006
            S    WL+S GD  +PG   +  G  L+MHSV+                  R  H+PP       V +Q WRD++GQ+E+ A P+D+ +VE VRLL+ V M+E+S R                                                       GE+G+CL+ P+I GP+  +F  GTAS+ Y++  YDVL +T G KGG+ GM+ Y+ + +FPV+K                 RWE  G+F + WKG+E+WLETEL HF  + VA KR +R                     GR ++A+  GP+ L  L +P GS P     ++  N + V +
Sbjct:  288 SCHHMWLRSRGDDTDPGARMAAGGTRLAMHSVS-----------------TRTAHLPPDDNLVHDVSYQRWRDKYGQVEVAAAPQDKKNVENVRLLDNVYMEELSHRNLPLMKEVVQLLWRLFGGPPVVGGDGGNTVARYALDLGCIPVLSFLSPLFPVLVRGESGTCLIDPVIEGPSGVTFASGTASIRYFVSTYDVLAQTNGEKGGRTGMQRYIGEMYFPVVKGDGPH-----------DRWEADGNFAVIWKGEELWLETELRHFSSLGVAFKRAWR------------------HLFGREDDALPSGPVSLTPLCTPFGSTPIPKAYIKVSNYSDVSN 583
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1441.3446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JE26_9PHAE2.800e-9969.39SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LBM4_ECTSI2.200e-9868.95TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L6Z9_9PHAE3.060e-4130.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 528..561
e-value: 14.0
score: 13.6
coord: 570..603
e-value: 11.0
score: 14.5
coord: 486..519
e-value: 24.0
score: 11.7
coord: 444..477
e-value: 29.0
score: 10.9
coord: 360..393
e-value: 0.41
score: 19.7
coord: 402..435
e-value: 9.6
score: 15.1
coord: 318..351
e-value: 42.0
score: 9.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 360..393
score: 8.054
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 486..519
score: 6.608
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 318..351
score: 5.93
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 444..477
score: 6.638
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 528..561
score: 5.369
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 402..435
score: 6.844
NoneNo IPR availablePFAMPF13374TPR_10coord: 616..651
e-value: 0.0074
score: 16.1
NoneNo IPR availablePFAMPF13424TPR_12coord: 443..517
e-value: 2.0E-10
score: 40.8
coord: 360..431
e-value: 3.4E-12
score: 46.5
coord: 527..601
e-value: 3.7E-13
score: 49.6
coord: 282..350
e-value: 1.3E-9
score: 38.2
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 517..657
coord: 391..554
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 351..485
coord: 517..657
coord: 391..554
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 351..485
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 251..393
coord: 325..443
coord: 475..599
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 251..393
coord: 325..443
coord: 475..599
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 556..667
e-value: 2.2E-19
score: 72.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 386..555
e-value: 7.3E-42
score: 145.4
coord: 216..385
e-value: 3.4E-27
score: 97.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 564..669
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 358..557
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 272..392
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 318..561
score: 16.301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1441contigH-canaliculatus_F_contig1441:6664..20424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1441.3446.1mRNA_H-canaliculatus_F_contig1441.3446.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1441 6089..20957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1441.3446.1 ID=prot_H-canaliculatus_F_contig1441.3446.1|Name=mRNA_H-canaliculatus_F_contig1441.3446.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1007bp
MGSMSDEVDIEAFWDHVQRATGSRSASWATFSSLFETYLRTNYAAEMSQL
PAATRAEPEMILRYAFERGSATRAAAGERICPEHLTLFLSRFGPMRWCLI
KAARSIFDESGCLVPWFHGKISSGEAQRAVEEWEASNQDGRNQRGAFLFR
YGDRLAIRFSFRRRSGEERLATCLVENEGERGYTLPGSEDDVYWPDLQAF
VAERGRGDFLHPVPSALYLECTEEIESRRRAQQMSESQMAYERQFFEESP
GKYEQAGSMHERAPAMREISLDRTVVQSLDSQAGDLENQGKYSEANHVYL
RASEIHEKLRGPDHPGLVARLSKRAGLLVKQAKYDEADHLYLRAIAIYKN
SRGAGHPGLAELLSKRAGLLVKQEKYDEADALYLRAIEIHEKSRGLDHPG
LAVLLSNRAGLLTELAKYDEADHLYLRAIEIGEHYWGPDHPDLAVLLSER
AGLLVKQAKYEEADPLYLRAIDIGEKSRGLDHPDLALWLSYRAGLLVKQA
KYDEADDLYLRAIEIGEKSRGPGHPDLAVLLSNRAELLVKLGNLVAADPL
YRLAIEIGEKTLGPENPDLAVWLNDRAELLEKQFKYEDAEPLYERCLTIR
TRALGHNHPALAQWFDKLSRVLNMQGKYEKAGSLDDRFLPIREKALGPDH
RAVARSLDSQGGGVEKQGNPVHLQDRVGGSFDVEEGFRGLHEAAPRFAVP
DSVTPCLPSHTADPAPVGRPSLRQFWLQSCGDINPGRMSSTCGVALSMHS
VTRRPLRDASDEAPSRKGPARALHVPPGGMSGRGVLFQTWRDEHGQIEIK
ATPRDRHHVEGVRLLNKVSMDEVSRRGETGSCLMSPIISGPTTASFLPGT
ASVSYYLGRYDVLVKTEGPKGGKRGMEEYLRDTFFPVMKVGRERYFPAME
EGKLSTRWEGTGDFKIAWKGDEVWLETELLHFCEVAVARKRGFRFKPWGR
SGRERLPTPDAPRSSGRAEEAIQEGPLGLGALGSPLGSDPFQGGTVRFQN
ATKVCH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat