prot_H-canaliculatus_F_contig14349.3403.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14349.3403.1
Unique Nameprot_H-canaliculatus_F_contig14349.3403.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length99
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14349.3403.1 vs. uniprot
Match: D8LMQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ8_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.430e-51
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0 
Query:    1 MSLVGLLVGLVLSVVKGAFGDLFRALGLASALAVTRSHRLSAEYPFLPYARRALAMLPRRPFPPAENPWKYKRADALAELEEAGVA-DGGNLPAEFSMAK 99
            MSLVGLLVGLVLSV +GAFGDLFRALGLAS LAV+RS RLSAEYPFLPYARRAL MLPRRPFPPAENPWKYKRADA+AELE+AGV  D GNLPAEFSMAK
Sbjct:   13 MSLVGLLVGLVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAK 112
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BLAST of mRNA_H-canaliculatus_F_contig14349.3403.1 vs. uniprot
Match: A0A6H5K822_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K822_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.670e-48
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0 
Query:    1 MSLVGLLVGLVLSVVKGAFGDLFRALGLASALAVTRSHRLSAEYPFLPYARRALAMLPRRPFPPAENPWKYKRADALAELEEAGVA-DGGNLPAEFSMAK 99
            MSLVGLLVGLVLSV +GAFGDLFRALGLAS LAV+RS RLSAEYPFLPYARRAL MLPRRPFPPAENPWKYKRADA+AELE+AGV  D GNLPAEFSMAK
Sbjct:  231 MSLVGLLVGLVLSVARGAFGDLFRALGLASVLAVSRSRRLSAEYPFLPYARRALVMLPRRPFPPAENPWKYKRADAIAELEDAGVPLDAGNLPAEFSMAK 330
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BLAST of mRNA_H-canaliculatus_F_contig14349.3403.1 vs. uniprot
Match: A0A835Z6C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.880e-12
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:    1 MSLVGLLVGLVLSVVKGAFGDLFRALGLASALAVTRSHRLSAEYPFLPYARRALAMLPRRPFPP 64
            M+L GL +GL+LS+ +GAFGDL RALGL + L V RS  + ++YP LP  + A+ M PRRPFPP
Sbjct:  177 MALAGLFLGLMLSIARGAFGDLLRALGLGAYLTVVRSASIGSKYPILPQLKAAMHMGPRRPFPP 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14349.3403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMQ8_ECTSI3.430e-5189.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K822_9PHAE1.670e-4889.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6C8_9STRA1.880e-1256.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.699

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14349contigH-canaliculatus_F_contig14349:161..457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14349.3403.1mRNA_H-canaliculatus_F_contig14349.3403.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14349 161..487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14349.3403.1 ID=prot_H-canaliculatus_F_contig14349.3403.1|Name=mRNA_H-canaliculatus_F_contig14349.3403.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=99bp
MSLVGLLVGLVLSVVKGAFGDLFRALGLASALAVTRSHRLSAEYPFLPYA
RRALAMLPRRPFPPAENPWKYKRADALAELEEAGVADGGNLPAEFSMAK
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