prot_H-canaliculatus_F_contig1434.3398.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1434.3398.1
Unique Nameprot_H-canaliculatus_F_contig1434.3398.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length302
Homology
BLAST of mRNA_H-canaliculatus_F_contig1434.3398.1 vs. uniprot
Match: A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)

HSP 1 Score: 397 bits (1019), Expect = 5.060e-128
Identity = 223/316 (70.57%), Postives = 248/316 (78.48%), Query Frame = 0
Query:    1 MSLRGCCPLIQGAEAFIEAHLQRVRLLRAQ---------CRWAEAVKAATELAKLSDTRGLAPQYARLLLELSRARLGAEPASPVAALPHALRCLAACESYSLDTIHASAMTHLAQVHLRMGSIRQARILLKACLGQLLANAPVQSQGEAWLVMARCEIAEVDLDDPPPSTTVAARHGGDGGA--EG-----GVSQGQAGPAADARGETRAQRWKGLRRAVSHLDRAIAMLKRCHDFAGLRDCLYLKSRVCGELISQGGEACDVAETKAERNASAKMFLAVSEAAVRALASPSPGLKIGPAEIRRYMSSSMDSVPW 300
            MSLR CCPL QGAE+FIEAHLQ+VRLLRAQ          RWAEAVKAA++LAKLSDTRGLAPQYARLLLELSRA LGAEPASPV ALPHALRCLA CESY+LD IHASAMTHLA+VHLRMGS R+ARILL+ACLGQLLA+APVQSQGEAWL MARC+IAEV L     S+T     G +GG   EG     G   G A PAA      RA+R + LRRAV +LDRAIA LKRCHDFAGLR+CLYLK+RVC EL+S   EA D      ERNAS++ FLA+S+A  RALA PSPGLKIGPAE+RRYMS+SM+SVPW
Sbjct:  653 MSLRACCPLSQGAESFIEAHLQKVRLLRAQGRQVIPQPPVRWAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAEVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSLGGGGQSSTAVPGAGXEGGVTIEGRXXGQGTGGGPAAPAAT----RRARREEVLRRAVLNLDRAIAKLKRCHDFAGLRECLYLKARVCAELVSAHEEASDKYRATVERNASSRDFLAISKAVARALACPSPGLKIGPAEVRRYMSASMESVPW 964          
BLAST of mRNA_H-canaliculatus_F_contig1434.3398.1 vs. uniprot
Match: D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 5.010e-110
Identity = 192/286 (67.13%), Postives = 217/286 (75.87%), Query Frame = 0
Query:   33 WAEAVKAATELAKLSDTRGLAPQYARLLLELSRARLGAEPASPVAALPHALRCLAACESYSLDTIHASAMTHLAQVHLRMGSIRQARILLKACLGQLLANAPVQSQGEAWLVMARCEIAEVDLDDPPPSTTVAARHGGDGGAE------------------GGVSQGQAGPAADARGETRAQRWKGLRRAVSHLDRAIAMLKRCHDFAGLRDCLYLKSRVCGELISQGGEACDVAETKAERNASAKMFLAVSEAAVRALASPSPGLKIGPAEIRRYMSSSMDSVPW 300
            WAEAVKAA++LAKLSDTRGLAPQYARLLLELSRA LGAEPASPV ALPHALRCLA CESY+LD IHASAMTHLAQVHLRMGS R+ARILL+ACLGQLLA+APVQSQGEAWL MARC+IAEV L     ++T     GG+GG                           +GPAA  R     +R + LRRAV +LDRAIA LKRCHDFAGLR+CLYLK+RVC EL+S+  EA D      ERNAS++ FLAVS+A  RALA PSPGLKIGPAE+RRYMS+S++SVPW
Sbjct:  478 WAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAQVHLRMGSTRRARILLQACLGQLLASAPVQSQGEAWLAMARCDIAEVSLGGGGQTSTAVPEAGGEGGVTIEXXXXXXXXXXRXXXXXPAAPAALSGPAATGR----VRRGEVLRRAVLNLDRAIAKLKRCHDFAGLRECLYLKARVCAELVSEHEEASDKYRATVERNASSREFLAVSKAVARALACPSPGLKIGPAEVRRYMSASVESVPW 759          
BLAST of mRNA_H-canaliculatus_F_contig1434.3398.1 vs. uniprot
Match: F0Y6Q2_AURAN (Anaphase-promoting complex subunit 5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q2_AURAN)

HSP 1 Score: 107 bits (266), Expect = 4.300e-22
Identity = 79/256 (30.86%), Postives = 122/256 (47.66%), Query Frame = 0
Query:   12 GAEAFIEAHLQRVRLLRAQCRWAEAVKAATELAKLSDTRGLAPQYARLLLELSRARLGAEPASPVAALPHALRCLAACESYSLDTIHASAMTHLAQVHLRMGSIRQARILLKACLGQLLANAPVQSQGEAWLVMARCEIAEVDLDDPPPSTTVAARHGGDGGAEGGVSQGQAGPAADARGETRAQRWKGLRRAVSHLDRAIAMLKRCHDFAGLRDCLYLKSRVCGELISQGGEACDVAETKAERNASAKMFLAVSE 267
            G EA +EA     RLL  + RW  AVK   EL +    +GL  Q A  L+  +  RL A P SPV AL  ALRCLA CE ++LD +HA A   L +V++ +GS+ +AR L++  L +LL ++ VQ QG+AW  +A  E+ E       P                           +   +  A+  K   R +++  RA+       ++  ++D  Y  S +  +L+    +AC   E KA+R+  A   L +++
Sbjct:  711 GPEAHVEAVRASARLLARRERWERAVKTMNELERYCGRKGLWAQQAECLMLGAHWRLDACPQSPVPALSPALRCLALCEKFALDHLHAEAAFALGRVNVYLGSVAKARSLIQGALPKLLGHSHVQLQGDAWYALAETELREKAYATKSP---------------------------EIHKDVVAEGLKDFSRPLTYYGRALEAFTYVQNWKRMQDAHYYLSMIHHQLVDATDDAC---ENKAKRDYHADRALKLND 936          
BLAST of mRNA_H-canaliculatus_F_contig1434.3398.1 vs. uniprot
Match: A0A7S2NXI7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXI7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.970e-17
Identity = 62/197 (31.47%), Postives = 97/197 (49.24%), Query Frame = 0
Query:   45 KLSDTRGLAPQYARLLLELSRARLGAEPASPVAALPHALRCLAACESYSLDTIHASAMTHLAQVHLRMGSIRQARILLKACLGQLLANAPVQSQGEAWLVMARCEIAEVDLDDPPPSTTVAARHGGDGGAEGGVSQGQAGPAADARGETRAQRWKGLRRAVSHLDRAIAMLKRCHDFAGLRDCLYLKSRVCGELISQ 241
            K+    GL    AR LLEL+  +L + P  P  ALP  L CL+ CE  S+D +HAS +  L +VHL++GS ++A  LLKA L  L  +AP+ +QG+AWL +A+   A++  +                                   E   QR + ++ ++S LD AI +  +  D    R+  YL++R+ G + S+
Sbjct:    4 KICTDNGLHSYNARFLLELASIQLESCPDHPFNALPPLLECLSLCERLSMDCLHASGLALLGRVHLQLGSPKEAVRLLKASLPILCQHAPLYTQGQAWLTLAKAN-AQIANET----------------------------------EVIRQRLRQVQLSISQLDEAIILYGQIDDLCCQREAYYLQARLYGFIPSK 165          
BLAST of mRNA_H-canaliculatus_F_contig1434.3398.1 vs. uniprot
Match: A0A7R9ZRD1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRD1_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 9.790e-11
Identity = 65/210 (30.95%), Postives = 107/210 (50.95%), Query Frame = 0
Query:   57 ARLLLELSRARLGAEPASPVAALPHALRCLAACESYSLDTIHASAMTHLAQVHLRMGSIRQARILLKACLGQLLANAPVQSQGEAWLVMARCEIAEVDLDDPPPSTTVAARHGGDGGAEGGVSQGQAGPAADARGETRAQRWKGLRRAVSHLDRAIAMLKRCHDFAGLRDCLYLKSRVCGELISQGGEACDVAETKAERNASAKMFLAVS 266
            A LLL  S  +L A  ++ +AAL   L+ L   +   +D IHA+A++ LA++ L+MG  ++A  LLK+C+ QL+ +  V  QGEA L  A C +    L +P     +     G+ GA          P+++       QR +    A+S L RA  + ++C D   L+   YL++RVC +L          A+  ++R+A+++ FL  S
Sbjct:   22 ADLLLRWSELQLEAS-STGMAALKSLLQVLTLSKHDEMDGIHATALSLLARLFLKMGHAKRALALLKSCINQLVQHEHVHYQGEAMLTYAMCYM---QLSNPKNDAWMEVT--GERGAR---------PSSN-------QRKRDRLNALSFLRRAQELFEKCQDIHKLKQIHYLQARVCNDLG---------ADKLSQRDAASEKFLQAS 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1434.3398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KKY0_9PHAE5.060e-12870.57Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
D7FTQ0_ECTSI5.010e-11067.13Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
F0Y6Q2_AURAN4.300e-2230.86Anaphase-promoting complex subunit 5 n=1 Tax=Aureo... [more]
A0A7S2NXI7_9STRA2.970e-1731.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9ZRD1_9STRA9.790e-1130.95Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..221
e-value: 6.1E-6
score: 27.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 16..148
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830FAMILY NOT NAMEDcoord: 17..265
NoneNo IPR availablePANTHERPTHR12830:SF9ANAPHASE-PROMOTING COMPLEX SUBUNIT 5coord: 17..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1434contigH-canaliculatus_F_contig1434:24374..26189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1434.3398.1mRNA_H-canaliculatus_F_contig1434.3398.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1434 23653..26197 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1434.3398.1 ID=prot_H-canaliculatus_F_contig1434.3398.1|Name=mRNA_H-canaliculatus_F_contig1434.3398.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=302bp
MSLRGCCPLIQGAEAFIEAHLQRVRLLRAQCRWAEAVKAATELAKLSDTR
GLAPQYARLLLELSRARLGAEPASPVAALPHALRCLAACESYSLDTIHAS
AMTHLAQVHLRMGSIRQARILLKACLGQLLANAPVQSQGEAWLVMARCEI
AEVDLDDPPPSTTVAARHGGDGGAEGGVSQGQAGPAADARGETRAQRWKG
LRRAVSHLDRAIAMLKRCHDFAGLRDCLYLKSRVCGELISQGGEACDVAE
TKAERNASAKMFLAVSEAAVRALASPSPGLKIGPAEIRRYMSSSMDSVPW
D*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037679Apc5
IPR011990TPR-like_helical_dom_sf