prot_H-canaliculatus_F_contig14337.3393.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14337.3393.1
Unique Nameprot_H-canaliculatus_F_contig14337.3393.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length46
Homology
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A6H5KBJ7_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ7_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 6.130e-25
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHP 
Sbjct:   40 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPA 81          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 8.000e-24
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV
Sbjct:   89 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 130          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A7S2LKQ2_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.520e-19
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            R CGYVFKRGD+AWNCR CQ DSTCV CDACF+ SDHTGH V
Sbjct:   35 RPCGYVFKRGDMAWNCRTCQTDSTCVLCDACFQASDHTGHEV 76          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A7S3XNE3_HETAK (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNE3_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 4.430e-19
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            RVCGYVF+RGDIAWNCR CQ D TCVQCDAC+R +DH GH V
Sbjct:   93 RVCGYVFQRGDIAWNCRDCQKDPTCVQCDACYRAADHRGHAV 134          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 9.550e-19
Identity = 34/42 (80.95%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            R CGYVFKRGDIAWNCR CQ DSTCV CD CFR SDH GH V
Sbjct:   27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEV 68          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A7R9VRA8_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VRA8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.290e-18
Identity = 34/42 (80.95%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            R CGYVF+RGDIAWNCR CQ DSTCV CDACFR SDH GH V
Sbjct:  157 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDACFRDSDHEGHEV 198          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A7S4V6U6_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6U6_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.960e-18
Identity = 32/42 (76.19%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            R CGYVF+RGDIAWNCR CQ DSTCV CD CF  SDH GH V
Sbjct:   44 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEV 85          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A7S3P848_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P848_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.270e-18
Identity = 33/42 (78.57%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            R CGYVF+RGDIAWNCR CQ D TCV CD CFRRSDH GH V
Sbjct:   51 RPCGYVFQRGDIAWNCRTCQTDPTCVICDDCFRRSDHQGHEV 92          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC)

HSP 1 Score: 80.9 bits (198), Expect = 8.790e-18
Identity = 31/41 (75.61%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    2 VCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            VCGY FKRGD+ WNCR CQ D TCVQCD CFR SDH GH V
Sbjct:   72 VCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEV 112          
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Match: A0A1Z5JKC4_FISSO (E3 ubiquitin-protein ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKC4_FISSO)

HSP 1 Score: 82.0 bits (201), Expect = 4.640e-17
Identity = 33/42 (78.57%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPV 42
            R CGYVFKRGDIAWNCR CQ D+TCV CD CFR SDH GH V
Sbjct:  185 RPCGYVFKRGDIAWNCRTCQTDATCVICDTCFRHSDHQGHEV 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14337.3393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBJ7_9PHAE6.130e-2597.62E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G3D3_ECTSI8.000e-24100.00E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S2LKQ2_9STRA1.520e-1980.95E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Lep... [more]
A0A7S3XNE3_HETAK4.430e-1978.57E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Het... [more]
A0A7S4EF35_9STRA9.550e-1980.95E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A7R9VRA8_9STRA1.290e-1880.95E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A7S4V6U6_9STRA4.960e-1876.19E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]
A0A7S3P848_9STRA5.270e-1878.57E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Amp... [more]
K8YNA8_NANGC8.790e-1875.61E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A1Z5JKC4_FISSO4.640e-1778.57E3 ubiquitin-protein ligase n=2 Tax=Fistulifera so... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 1..45
e-value: 0.0089
score: 9.4
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 3..42
e-value: 3.2E-11
score: 43.2
NoneNo IPR availableGENE3D2.10.110.30coord: 3..45
e-value: 2.1E-14
score: 55.2
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 2..42
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14337contigH-canaliculatus_F_contig14337:2394..2531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14337.3393.1mRNA_H-canaliculatus_F_contig14337.3393.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14337 2394..2531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14337.3393.1 ID=prot_H-canaliculatus_F_contig14337.3393.1|Name=mRNA_H-canaliculatus_F_contig14337.3393.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=46bp
RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVRKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like
IPR003126Znf_UBR