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Homology
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI) HSP 1 Score: 296 bits (757), Expect = 3.730e-85 Identity = 180/229 (78.60%), Postives = 188/229 (82.10%), Query Frame = 3
Query: 1038 AAAVPSSPHVAQAAGQAAQQNQRKTPAAQRQSPRSHQHQHPSQPTGAPRGRRNAQPRSRQPYNGG-AGRGGAANTSG--ATARAPGPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGA--DAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNRNRPG 1709
AA SSP VAQAAGQAAQQNQR+ P QR PRS QHQHPSQPTGAPRGRRN PRSRQ NGG AGRG A TS A AR PG MVGTGEALL+IRA+GGP DGKGAASV TAQEFDFQ ELQKFDKEKELAKEM GL++ A S STA +GG G D+VKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRG NRN+PG
Sbjct: 185 AAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLINGGGAGRGAAGGTSATSAPARTPGAMVGTGEALLNIRARGGP--ATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEA--SNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNRNKPG 409
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A7S2DIJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIJ2_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 8.070e-12 Identity = 63/148 (42.57%), Postives = 78/148 (52.70%), Query Frame = 3
Query: 1263 GATARAPGPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKS-SFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRGQNRN 1700
GA+ G M GTG +LL+ + KG + + A S +++FDF + FDK+KE K L A+ S TA D+ KKYN S SFFDE+SCD LDR R TR E N +TFG GLQ RR RG RGQ N
Sbjct: 246 GASGSRSGAMPGTGASLLTRKPKG---LDKEHRNALSAEMSEDFDFSSAAEDFDKKKEAEK------LAARGSSITAEG-----DSSKKYNPSASFFDELSCDALDRGGKRFDSQTRLDEQKKNSETFGAVGLQDNRRSRGARGQRNN 379
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A3F2RWG2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWG2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.500e-9 Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3
Query: 1341 PAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRGQNRNRPGG 1712
P+ +G G + EF+F L FDK++E +K + T ++ Y KSSFFD ISCD LDR G++ R++ A E +N +TFG GL + R RGGRG+ R GG
Sbjct: 165 PSGAEGAGVGPDDASGEFNFAEGLNDFDKQQEFSK----------------LEENTKTESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRGRGGRRNGG 273
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A3R7GHF0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GHF0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.000e-8 Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3
Query: 1341 PAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRGQNRNRPGG 1712
P+ +G G + EF+F L FDK++E +K + T ++ Y KSSFFD ISCD LDR G++ R++ A E +N +TFG GL + R RGGRG+ R GG
Sbjct: 213 PSGAEGAGVGPDDASGEFNFAEGLNDFDKQQEFSK----------------LEENTKTESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRGRGGRRNGG 321
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A836C876_9STRA (Scd6-like Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.030e-8 Identity = 57/141 (40.43%), Postives = 73/141 (51.77%), Query Frame = 3
Query: 1281 PGPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAV----------KKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR 1673
PG VGTG+ L++ +GG G +V + +EFDFQ L +FDK+ E E+ G+ A A G G +A+ KKYNKSSFFDEISCD LD GR RV E +N +TFG TG+ R
Sbjct: 160 PGKTVGTGDHLMARPNRGG--------GGIAVES-EEFDFQAALSQFDKDAERT-EIYGVGTAAD-----AAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALD---GRH-RVPGFTERKLNTETFGATGVNTGNR 281
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: M4BC25_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC25_HYAAE) HSP 1 Score: 69.7 bits (169), Expect = 1.040e-8 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 3
Query: 1296 GTGEALLSIRAKGGPPA-QVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQ 1691
G G LL+ + + GP +G G + + EF+F+ +L FDK++E +K + T ++ Y KSSFFD ISCD LDR G++ R+T A E +N +TFG GL + R GRG+
Sbjct: 209 GMGGHLLNRKERRGPGGVDENGAGGRPETASCEFNFEAKLSDFDKQQEFSK----------------LEEDTKKESTGSYQKSSFFDTISCDALDRLEGQRARMTGAQERTLNTETFGAVGLNNRRNFRGRGR 325
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A8K1CKG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKG8_PYTOL) HSP 1 Score: 68.9 bits (167), Expect = 2.040e-8 Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 3
Query: 1296 GTGEALLSIRAKGGPPAQVDGKG-AASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRG 1688
G G+ LL R + +V G G SV++ +F+F+ L FDKE+E K L+L ++ + Y KSSFFD ISCD LDR G+Q R+T + E +N +TFG GL + R RGGRG
Sbjct: 227 GMGDHLLKRRER-----RVPGGGDPTSVTSGNDFNFENGLNDFDKEEEFNK----LSLDDNKAKGS-------------YQKSSFFDTISCDALDRLEGKQGRITASEERKLNTETFGAVGLNNRRSFRGGRG 337
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A485L4C0_9STRA (Aste57867_15718 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4C0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 4.740e-8 Identity = 47/104 (45.19%), Postives = 55/104 (52.88%), Query Frame = 3
Query: 1389 EFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNRN 1700
EFDF G L FDKEKE +K LT+ +SR + Y KSSFFD ISCD LDR G R+ E +N +TFG GL + RR RG NRN
Sbjct: 264 EFDFAGGLGDFDKEKEFSK----LTVEESSSRPVVKSA---------YQKSSFFDTISCDALDRLEGNSGRMKAHEERKLNTETFGAVGLNN--RRNYRGGNRN 352
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A484E5S7_BRELC (TFG domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5S7_BRELC) HSP 1 Score: 65.9 bits (159), Expect = 1.270e-7 Identity = 41/119 (34.45%), Postives = 58/119 (48.74%), Query Frame = 3
Query: 1341 PAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNR 1697
P +G + + EF+F+ L FDK++E K + T D+ Y KS FFD ISCD LDR G++ R++ A E +N +TFG GL + R GRG+ R
Sbjct: 179 PGGTEGTKVVPEAASGEFNFEERLHDFDKQQEFVK----------------LEESTKKDSKGSYQKSMFFDTISCDALDRLEGQRSRMSGAEERKLNTETFGAVGLNNRRNLRGRGRGR 281
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A7S3PJE4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJE4_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.200e-7 Identity = 58/144 (40.28%), Postives = 75/144 (52.08%), Query Frame = 3
Query: 1284 GPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGAD---AVKKYNKSS-FFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNRNR 1703
G + G G+ L +R +GG G + ++T EFDF +KFDKE ELAK L+L T + D A Y+KSS FFD ISCD+ DRAAG++ + A E +N +TFG GLQH RGQ R R
Sbjct: 183 GAIPGMGKHLEKVRMRGG-----GGNIESDLNT--EFDFASMNEKFDKEAELAK----LSLNENTISGSDEEDENAEDDETATAGYDKSSSFFDTISCDMNDRAAGKR-NLGGAEERQLNSETFGAVGLQH------RGQGRGR 308
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 303.9 |
| Seed ortholog evalue | 1.7e-79 |
| Seed eggNOG ortholog | 2880.D8LRU5 |
| Preferred name | LSM14A |
| KEGG ko | ko:K18749 |
| GOs | GO:0000226,GO:0000242,GO:0000932,GO:0001817,GO:0001819,GO:0001959,GO:0001961,GO:0002218,GO:0002221,GO:0002252,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006417,GO:0006446,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010647,GO:0015630,GO:0016043,GO:0017148,GO:0017151,GO:0019222,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030036,GO:0030522,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031349,GO:0031369,GO:0031370,GO:0032268,GO:0032269,GO:0032991,GO:0033962,GO:0034063,GO:0034248,GO:0034249,GO:0034622,GO:0035556,GO:0035770,GO:0036464,GO:0039528,GO:0039529,GO:0043186,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044764,GO:0045088,GO:0045089,GO:0045169,GO:0045495,GO:0045947,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051233,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060293,GO:0060338,GO:0060340,GO:0060759,GO:0060760,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0097159,GO:0098542,GO:0098586,GO:1901363,GO:1904688,GO:1904689,GO:1990124,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766 |
| EggNOG free text desc. | cytoplasmic mRNA processing body assembly |
| EggNOG OGs | KOG1073@1,KOG1073@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03019 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Novel Sm-like protein with long N- and C-terminal domains. |
| Ec32 ortholog | Ec-08_002480.1 |
| Exons | 7 |
| Model size | 3444 |
| Cds size | 1878 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929175.5255826-UTR-H-canaliculatus_F_contig1427:1..174 | 1622929175.5255826-UTR-H-canaliculatus_F_contig1427:1..174 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1427 2..174 + |
| 1696845706.950721-UTR-H-canaliculatus_F_contig1427:1..174 | 1696845706.950721-UTR-H-canaliculatus_F_contig1427:1..174 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1427 2..174 + |
| 1622929175.6920397-UTR-H-canaliculatus_F_contig1427:5769..7162 | 1622929175.6920397-UTR-H-canaliculatus_F_contig1427:5769..7162 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1427 5770..7162 + |
| 1696845707.038271-UTR-H-canaliculatus_F_contig1427:5769..7162 | 1696845707.038271-UTR-H-canaliculatus_F_contig1427:5769..7162 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1427 5770..7162 + |
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1427.3354.1 >prot_H-canaliculatus_F_contig1427.3354.1 ID=prot_H-canaliculatus_F_contig1427.3354.1|Name=mRNA_H-canaliculatus_F_contig1427.3354.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=626bp
MNSPSQVGSALLNHIAAGWSRHLKATRSLSHTSPKIPARLPCSFTKQASQ PPPPPPPPPPAAPIQFTQPPPPTAPPPPAGPPPLLSPAFVAGAAVMHPQP QQQLQQTPPSQQQYQRQQPPPPPQQPPPPQQPPPPQQPPPPQQPPPPQQP LPPQQPPPQQQPPPQQQQPPQQQPPPQQQPPPQQPPPQQRQPPQQHRQQH QPPPAPRQQTRALQGSNLHQQRQQQQHHQPQQRDHQPPPPSITSGAQRSA KVTPNRQQQQQQQPTQSSQRPPAPSTRNAPPAQGHRTGAAAVPSSPHVAQ AAGQAAQQNQRKTPAAQRQSPRSHQHQHPSQPTGAPRGRRNAQPRSRQPY NGGAGRGGAANTSGATARAPGPMVGTGEALLSIRAKGGPPAQVDGKGAAS VSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAV KKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR RGGRGQNRNRPGGGGATSAGGRGVRGGVGVGNSATGVGGATAGGGRGGGG GGRAGAGRGPGGGGRAAGRGGYTGGSKSGTNVGQDRRGGAGQARPRPRGG RGRGSQVGQGQKSQAPAAASQSQAV* back to topmRNA from alignment at H-canaliculatus_F_contig1427:2..7162+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1427.3354.1 ID=mRNA_H-canaliculatus_F_contig1427.3354.1|Name=mRNA_H-canaliculatus_F_contig1427.3354.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7161bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1427:2..7162+ (Hapterophycus canaliculatus Oshoro5f female) GTAGAGCTTCGCTACAAGCACTGTACCGTGGTCTCAACATCGGTATCTGG
GTGTGTCGACCAATCTATCGACCTGTCTCCTTTTCTTTTTCTCGATTGAA
TATTACCTTCCATCCGTTTTGTTGGTGAAGAATATGGCGTGCAGGTATAC
GCAAGTGATTTCATCGTCGCACGATGAACAGCCCTTCACAGGTTGGATCC
GCCCTTCTCAACCATATCGCTGCTGGTTGGTCAAGACATCTCAAAGCAAC
AAGGTCCTTGTCGCACACATCACCTAAAATTCCCGCTCGATTGCCGTGTT
CTTTTACCAAGCAGGCAAGCCAGCCGCCGCCGCCGCCACCGCCGCCGCCC
CCGGCTGCTCCGATTCAGTTCACGCAGCCACCTCCACCGACTGCCCCCCC
GCCTCCTGCTGGCCCTCCGCCTCTCCTTAGCCCGGCCTTTGTTGCGGTGA
GTGTCGTCTGATACTTATATTTGGAATGGTGGCCTTACGCAGATGGGCGT
GTGTTTCTGCTCGTGCGGTGTTTCTTCCTCGCTCACCTTTCGGAATCTTC
GCCAGTCTTGGCATGCGCTTGTTTTCAGGGCAGTTTATCAACGTCCGTCA
GCTGGTTTTTGATAAAAAGTTTGCGTTGAATCGGATGCTTCGCGGATCCG
CCTCAAAAGTCGATCTGTGGCACGCACTCGCAGCTACTCTACGGATATGA
AAGCTGTTAAGGGTACAGTACTCGTAAACTGTTGGCTATAATTATCGTAT
CACGTCACGTCGCACTTGAATTTTCTTTTGTCGCTGTTTGCTACTCAGGG
CGCGGCTGTGATGCACCCTCAACCCCAGCAGCAGCTTCAGCAAACGCCCC
CTTCGCAGCAGCAGTACCAGCGGCAGCAGCCACCGCCTCCGCCGCAGCAG
CCACCTCCGCCGCAGCAGCCACCTCCGCCGCAGCAGCCGCCTCCGCCGCA
GCAGCCGCCTCCGCCGCAGCAACCGCTTCCGCCACAGCAACCGCCTCCGC
AGCAGCAGCCGCCACCGCAGCAGCAGCAGCCTCCGCAGCAGCAGCCGCCT
CCGCAGCAGCAGCCGCCTCCGCAACAGCCGCCACCGCAGCAGCGGCAGCC
GCCGCAGCAGCACCGGCAGCAGCACCAGCCCCCTCCCGCCCCGCGGCAGC
AAACGCGAGCGCTGCAAGGTAGCAACCTTCATCAGCAGCGCCAGCAGCAA
CAGCACCATCAACCGCAACAGCGGGACCACCAGCCTCCCCCCCCAAGCAT
CACATCTGGAGCCCAAAGGTAATGGTCTACCCACCACACCAGCGCATTAA
CTCCTTCCTCTAACCTTGACTGGAGGAACACTGCTGTTATGAAGGAGAGA
AAAATGAACACATCCTTGTACATGCAAAGGAGCACGAGATGGCAATCCTA
TGAAGCTTGCTGATGCCATCCAGCTCACCGCTGCTCTCGCTCTCTCTCTC
TCTCTCTCTGTCTCTCTCGCATACCTCGTACTTTTATGCATCTCTCAGCT
CATTTCATCGTGGTCGTTTTCGCGCACATGTTTCGCATTGAACCACAGCT
TGTCGTTCCAGTTCAACTCCTTGACTTGACAGCCTGGTGTGAATGGTGCT
CGCTTTTTTTCCAGGTCGGCCAAGGTAACCCCTAACCGGCAGCAGCAGCA
GCAGCAGCAACCTACGCAGTCTAGTCAGAGACCGCCTGCTCCTTCCACCA
GAAACGCGCCCCCAGCGCAAGGGCACCGCACCGGCGCCGCAGCTGTGCCG
TCTTCGCCCCACGTGGCACAGGCGGCCGGGCAGGCTGCCCAGCAGAATCA
GCGAAAGACACCTGCAGCGCAGAGGCAGTCCCCACGGTCGCACCAACACC
AGCACCCCTCGCAGGTTAATTGGGGTGTTTGACCGTCCATTGTAGGGTAT
TTCGGTCCAAATGCGAATTTTCGCCTTGACCTTATCCGCACATTGCAGAC
ACCCACTGCCAGAGAGGTGTGGAGGTCGAAGCGTTAGCTTTCTTCGTCAA
AATTGAAGCTCATTTTGCACGCTGGGACGTTCTCTTCTTTCTCCCTGTTA
CGCATGATTCGTTGTCAGAGTCGAACGTTTGCTTTTGTGGACAGAGGAAA
ATGTAGGGCAAGCCTTGGTGGCTGAAGTTCTGAAGTAGAAACAGGTGTCG
GTAAGACATTCATGTGTTTCAGAAATTGGTTGGACGTGGGTTTTGAATCA
AAGCATCGTTTTTGGCTGTTGCGTCACGCCCCTCTGACGTTCCTCGTTTA
ATTGTTGGATTGGTCCGACCAATCTTGTGTCACCCTGCCCTTCAGCCAAC
GGGAGCACCGCGGGGAAGGAGGAACGCCCAACCCAGGTCGCGCCAGCCTT
ACAACGGGGGTGCGGGGAGGGGAGGCGCTGCAAATACAAGCGGAGCCACT
GCCCGGGCGCCTGGGGTAAGAGGACGGTTTGGATGCAAGTGCGTTTCCGA
TTATGTTTTTTATCAAGGATGTGGGACGGGAGGGTTTCGAGCGCCGCAGG
CGGGAAAATTTTGGGTCCCATGTTGTGTGGGATGGGGTCCCATGGTCAAT
TGTTGCCGCTCCTATTGAATGGGATGGGAAGTTGGAGTGCCTTCCAATCA
TGGGACCCGTGGGAATCCACAAAAAGCGGGATGGGATCGGATGGGACTTT
CGGCCTATAAGGGGTATGGTAGGATTCGATATGGGATTCATGATGGGGCA
AAACCGAGGGCAACCTGCGCGGGTGTAGGTACCCCCCAGTAAACTACATG
CATACGTACGTGGACCAGAAGTGGGGCTTGAAAAGATACATTTCTGTGAA
AAACCAAACAGCTCAACCGAAGCGAGTTGGTCCTGTTGTGTCTTGTTCAT
TGGTAGTCCAACACGAAAATACAAAAAGACAACAACCCCGATGGATACCA
AAACAAGGAAGATCAATGCACCACGCCCCGCCAACGGAAAAGAAAAAAAA
ATGATGTGGATGGAAAATGCACCCGGGTAAAGTCTCTTGCTTAATTTAGT
CTACAATACCAACTTCCTGTGAAACTGACACAGGAGAAACACCCGTGGGA
CGGGCCGCAGCGTTCTTGGCAATAGCCGCTTCTTCTTTGTTCGACTCCCG
CTCTTAAGCCAAAGCATCCAAATCACTCAACACCTTCCCTAGCCCAGGGA
TAAGGTGCTTGTTGAGCCCGAGGGAAAGAGTCTTCCCAGCGGGTAAAGTG
TTCGAACGAAGATGCCTCACGATCAACTCTAGGGCGGAAACGTTCCTCTC
TGTTGGGCAACTGGCGGCATCAATGCCACGGTGCAACCGCGCTACCAAGC
CAACACGCGGCCAGCGGGCAGAGACGACAACGTTCCCCGACTCGTCGACT
TGTCGAGCCCATCGACTGCACGCAGCGTTCAGTGCTCTAGGGCAGTGAAT
GTGGAGTCGGTTTCGGTTCATGCACACTGGGACGGGAGTCGCCGCGTTTA
GAGCGAGATTGGGATGGGAGTAACCATGCCGATGGCGGGACGGGAAGAAG
CTGGGATGGGAGCGGTCCTATCGGTTGTATGAGAGTGGGTGGGGCAACCA
TTCGCAATGGGATGGGGCTTGGTGGAATGGGAACGTCCTGTCCCACAGTG
CCCATCCCATTCCCATCCCATCCATTTCATGCGGGAATCCCATCCCGTTC
GTTCCCATGTAAGCCCTTGGTTTTTATGGAATGCACCGGTGACAAGCTGT
GCCTGGCGAGGCTTGAGGTGTGCACAAAAAGAAATATACGGAGTATGATT
TTACAGGTATCGCAAGCCTCAAGCACCGATGTGGATTTCTTTCGTTTTAA
TGTTTTCCCGTGAAGTCCAGAACGCGACGCTGCGGCTCAAACCCCTGAAC
TTATTCCGCTTTCATCGCTACCATAGGAAGAATTGGCGCTCTTGAGTACT
CAAGCATCTTGGATGAACACCTTGACTCATGAGCAGCTTTCGATGCATGA
TTCGAAGGCGCGAATTTCATTGTCCTGTTGCCCCCACTTATCGTGCCGCT
CTTTTGTTCTTTCTTTCGATTCAGCCGATGGTGGGCACCGGAGAAGCGCT
ACTCTCTATTCGCGCCAAAGGCGGTCCACCTGCTCAGGTGGACGGGAAGG
GGGCTGCGAGCGTTTCCACCGCGCAAGAATTCGATTTCCAGGGCGAGCTC
CAAAAGTTCGACAAGGTGAAGAGACGAGGGGTGGATTGATTGGCCGGGGC
GGTGACGGACTTGCGTGGTCTTGAAGAAGAGGTCGGCTAGGGCATTTCAG
GATAATTTTGCTCATCATGAACCCTCGTAAAGGATGACCACGCTGAGCTA
CGAACCATGGTGTGACAATGCGAGTGGGTAACAGTCAAATTACGAGCATT
TCACTCACCCTGCCCATCTCACCGCTCCCCACTTGTTGCAACGAGCAGAC
GCGTTTTTGAAACATCGCGTTTCGTGACAATCTTGCAGGGTTGTTCACAC
TATCGTGCCCTTGATTTCCGCACTCAAGGCTGTTCTGGTGCGCCTCCCAG
TGAAGGAGATGCCGCAGCATCGTAAAAAGTCCTGGGTGCTTGCATGCTTG
GTAGCGTGTGGTTTTGTTTGAAAGAAGACCACGAAGGAATACCCTCTGGG
CCGCGTCTCAGCGGGCGTCACGGAAGGCTTGTGTACAATTCGATACGGTG
AGGGTTTCAGTGTGTTGGACAGCGTTAAAACATTGCCAAAAGCAGACGGC
CGTGAGAAAGTGAAGTGCTGGATTGACTATGGTCAGATGGACGTGGTTGT
CTTGCCGTGCATGTCGCTCCCGACTGCTTGTCGCATCCTTGCAGGAGAAG
GAGCTGGCGAAGGAGATGGACGGGTTGACCTTGGTGGCGCAGACGTCGCG
CTCCACTGCGGTCGCAGGGGGCACTGGAGCCGACGCCGTTAAGAAGTACA
ACAAGTCATCCTTCTTCGACGAGATTTCGTGCGACGTGCTGGACCGGGCC
GCAGGTGGATAAAAAAAACAAGAGGGCGGGGCAGAGTGGATACATATCAC
TCCAAAAAACCATTGAGCAACATCATGTTGCGCTTTCGCTCGACGATTTG
ATGTTGAATCCGACAGAACTTGTTGGAATCCATCTCTCCCCAACATAAGT
ACGGGGGCCGAAAGAAGAGCAGGGGTGGGCGCAAACCCCATACGGTACCA
ATGAGTAAGGTGATATTCGGAGTAGGTAGTGAAGGACCAGCCTTTGACGG
AAAGAAAGCAGAGGTAGTCTCGCAGGGTCCCTCCCCAAACTGTCTATTCT
GCTCGCGGTCTGTGTCAATCTTTTTGCTGCCCCTCCTTCCGCGATACTCT
TCAGGGCGCCAGCCGCGGGTGACACGGGCCGCGGAGATGGACATGAATAT
GGATACGTTTGGCACCACGGGCCTCCAACATGCTCGACGCAGGGGTGGAC
GAGGCCAAAACAGGAACAGGCCGGGAGGAGGGGGCGCAACCAGCGCTGGG
GGCCGAGGCGTTCGAGGTGGAGTAGGAGTAGGAAACAGCGCCACAGGAGT
CGGGGGCGCAACCGCTGGCGGCGGGCGTGGAGGCGGCGGTGGCGGTCGCG
CAGGTGCTGGGCGAGGTCCCGGGGGTGGCGGCCGTGCTGCCGGAAGGGGA
GGGTACACTGGGGGTAGTAAGAGCGGCACAAACGTCGGCCAAGACCGAAG
GGGAGGTGCGGGGCAAGCACGGCCCAGGCCGAGGGGCGGAAGGGGTAGGG
GCAGCCAAGTCGGGCAGGGCCAAAAGTCGCAAGCACCTGCCGCAGCCTCT
CAGTCCCAAGCGGTCTGACGCCGAGACGTCGATGGCTCGCTGCAGGTAAC
CAATTGCCTTTCCAAGATCAACGAGGGGAGTTGCCGACAAAACAGCAAGC
GCGTGCGGAGGCTGCGAGGAGCATTCGGTTGCGAGTCGTGTACGTTTCAG
CCTAGTGTGGTTTGGGAACGGACAACGTATAAGAGCAGTACACGGGGTGA
GTAGAGACGGTTTTACCGGAGGCGCGGGGCTTTGCAATCTGTGGAGCAAA
GCCGAAGGGTGAGTGAATCCATCGGCGTTGTTTTGACTGTCGATGCCCGG
CAGGATAGAGGCGGTGTCACGCGCAGTATGCTCTCGCTTATCGCCAAGAA
GCCAGGCGAGTGGACATGTCGAGCACTTTTTGGAGGCTTGGCTGGTTCCC
AGATATCCGTATCATCCCGTTGTTGGCATACTTCGTGAATCCGCGACAAC
AAACGATGATCGTCAGGTCATCATCAGAAAAAGGGACTGAAGTAACGGGT
ACATGTTGCAGGTCGTGAGCCGAAGGTGATCGAGCACGCCCTTTGCATGC
CCTTTCGCGGTGAGAGCTTGAAGCAATGCAATTTGGCGCCAGGGCCACAC
ATTTCTACTGCTGTTGTATCCTGTTTAGAAATGGATGGAACCAACGCCAG
AAATCCACGATATGATGCCGATGGTTTTTAGAAGAAAGGATTAAGGTGTT
TTTGTTTATCCGTGTGGACTGATTGCCCAACTCTGTGGTTCATGTAGCGC
AGCAATCGTCGCAGTTAGTATTCTTCGTTTCCGTTTAGTCGCGTGTTCGT
GAAAATGTTGTGTTTCCATTAATACTCGCTTTAGCATCGGGAAACATACC
CATGGGGTGCCCATGAGCTCCGACTCACGTGTGGGTGTACAACCGTGCTT
GAAATGCGGAACATTAGGAGTAGTAGCTAAAGGGAGGGACACGACGGTGG
GATATGGTCGAATACGATACGGTCGAATACGGTGGGCTTCATGACAGGCC
GTAGCATTTGAGGCGACGTGTTTTTCGTGATGGTTGGTTCTCGTGCTTGA
GCGCTCGGCGGAGATGATGGAATCGAATGCCCAAACGCCGAAGGATGCGA
ATGCCCATCTCTCCCAGCGTCGAGGAGCTTCAACCTGAAATCGACACCGT
TGGCCGGCTTCCGTGCAGTACCAACATCACAAGATCTTCCGACATTCGAC
GTAACTCGGTTCCTGCGGAAAATGGGGCTCATTGACTTCGAACTGAAACA
GAGGCGCACGAGCAGGATATGCTAGATGTGATGAGTCTGACCTCGTTTGG
TCTCCATCTGACCACAAAAAAAGGAAACATGATCTTATCCCTCGGGTTTC
CCTGACGTCTCACCTGCTGCTTTGGCTGTGGTTCCAAATGAAAATTCTTT
AACGCGCGTGG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1427:2..7162+ >mRNA_H-canaliculatus_F_contig1427.3354.1 ID=mRNA_H-canaliculatus_F_contig1427.3354.1|Name=mRNA_H-canaliculatus_F_contig1427.3354.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3756bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1427:2..7162+ (Hapterophycus canaliculatus Oshoro5f female) ATGAACAGCCCTTCACAGGTTGGATCCGCCCTTCTCAACCATATCGCTGC TGGTTGGTCAAGACATCTCAAAGCAACAAGGTCCTTGTCGCACACATCAC CTAAAATTCCCGCTCGATTGCCGTGTTCTTTTACCAAGCAGGCAAGCCAG CCGCCGCCGCCGCCACCGCCGCCGCCCCCGGCTGCTCCGATTCAGTTCAC GCAGCCACCTCCACCGACTGCCCCCCCGCCTCCTGCTGGCCCTCCGCCTC TCCTTAGCCCGGCCTTTGTTGCGATGAACAGCCCTTCACAGGTTGGATCC GCCCTTCTCAACCATATCGCTGCTGGTTGGTCAAGACATCTCAAAGCAAC AAGGTCCTTGTCGCACACATCACCTAAAATTCCCGCTCGATTGCCGTGTT CTTTTACCAAGCAGGCAAGCCAGCCGCCGCCGCCGCCACCGCCGCCGCCC CCGGCTGCTCCGATTCAGTTCACGCAGCCACCTCCACCGACTGCCCCCCC GCCTCCTGCTGGCCCTCCGCCTCTCCTTAGCCCGGCCTTTGTTGCGGGCG CGGCTGTGATGCACCCTCAACCCCAGCAGCAGCTTCAGCAAACGCCCCCT TCGCAGCAGCAGTACCAGCGGCAGCAGCCACCGCCTCCGCCGCAGCAGCC ACCTCCGCCGCAGCAGCCACCTCCGCCGCAGCAGCCGCCTCCGCCGCAGC AGCCGCCTCCGCCGCAGCAACCGCTTCCGCCACAGCAACCGCCTCCGCAG CAGCAGCCGCCACCGCAGCAGCAGCAGCCTCCGCAGCAGCAGCCGCCTCC GCAGCAGCAGCCGCCTCCGCAACAGCCGCCACCGCAGCAGCGGCAGCCGC CGCAGCAGCACCGGCAGCAGCACCAGCCCCCTCCCGCCCCGCGGCAGCAA ACGCGAGCGCTGCAAGGTAGCAACCTTCATCAGCAGCGCCAGCAGCAACA GCACCATCAACCGCAACAGCGGGACCACCAGCCTCCCCCCCCAAGCATCA CATCTGGAGCCCAAAGGGCGCGGCTGTGATGCACCCTCAACCCCAGCAGC AGCTTCAGCAAACGCCCCCTTCGCAGCAGCAGTACCAGCGGCAGCAGCCA CCGCCTCCGCCGCAGCAGCCACCTCCGCCGCAGCAGCCACCTCCGCCGCA GCAGCCGCCTCCGCCGCAGCAGCCGCCTCCGCCGCAGCAACCGCTTCCGC CACAGCAACCGCCTCCGCAGCAGCAGCCGCCACCGCAGCAGCAGCAGCCT CCGCAGCAGCAGCCGCCTCCGCAGCAGCAGCCGCCTCCGCAACAGCCGCC ACCGCAGCAGCGGCAGCCGCCGCAGCAGCACCGGCAGCAGCACCAGCCCC CTCCCGCCCCGCGGCAGCAAACGCGAGCGCTGCAAGGTAGCAACCTTCAT CAGCAGCGCCAGCAGCAACAGCACCATCAACCGCAACAGCGGGACCACCA GCCTCCCCCCCCAAGCATCACATCTGGAGCCCAAAGGTCGGCCAAGGTAA CCCCTAACCGGCAGCAGCAGCAGCAGCAGCAACCTACGCAGTCTAGTCAG AGACCGCCTGCTCCTTCCACCAGAAACGCGCCCCCAGCGCAAGGGCACCG CACCGGCGCCGCAGCTGTGCCGTCTTCGCCCCACGTGGCACAGGCGGCCG GGCAGGCTGCCCAGCAGAATCAGCGAAAGACACCTGCAGCGCAGAGGCAG TCCCCACGGTCGCACCAACACCAGCACCCCTCGCAGGTCGGCCAAGGTAA CCCCTAACCGGCAGCAGCAGCAGCAGCAGCAACCTACGCAGTCTAGTCAG AGACCGCCTGCTCCTTCCACCAGAAACGCGCCCCCAGCGCAAGGGCACCG CACCGGCGCCGCAGCTGTGCCGTCTTCGCCCCACGTGGCACAGGCGGCCG GGCAGGCTGCCCAGCAGAATCAGCGAAAGACACCTGCAGCGCAGAGGCAG TCCCCACGGTCGCACCAACACCAGCACCCCTCGCAGCCAACGGGAGCACC GCGGGGAAGGAGGAACGCCCAACCCAGGTCGCGCCAGCCTTACAACGGGG GTGCGGGGAGGGGAGGCGCTGCAAATACAAGCGGAGCCACTGCCCGGGCG CCTGGGCCAACGGGAGCACCGCGGGGAAGGAGGAACGCCCAACCCAGGTC GCGCCAGCCTTACAACGGGGGTGCGGGGAGGGGAGGCGCTGCAAATACAA GCGGAGCCACTGCCCGGGCGCCTGGGCCGATGGTGGGCACCGGAGAAGCG CTACTCTCTATTCGCGCCAAAGGCGGTCCACCTGCTCAGGTGGACGGGAA GGGGGCTGCGAGCGTTTCCACCGCGCAAGAATTCGATTTCCAGGGCGAGC TCCAAAAGTTCGACAAGCCGATGGTGGGCACCGGAGAAGCGCTACTCTCT ATTCGCGCCAAAGGCGGTCCACCTGCTCAGGTGGACGGGAAGGGGGCTGC GAGCGTTTCCACCGCGCAAGAATTCGATTTCCAGGGCGAGCTCCAAAAGT TCGACAAGGAGAAGGAGCTGGCGAAGGAGATGGACGGGTTGACCTTGGTG GCGCAGACGTCGCGCTCCACTGCGGTCGCAGGGGGCACTGGAGCCGACGC CGTTAAGAAGTACAACAAGTCATCCTTCTTCGACGAGATTTCGTGCGACG TGCTGGACCGGGCCGCAGGAGAAGGAGCTGGCGAAGGAGATGGACGGGTT GACCTTGGTGGCGCAGACGTCGCGCTCCACTGCGGTCGCAGGGGGCACTG GAGCCGACGCCGTTAAGAAGTACAACAAGTCATCCTTCTTCGACGAGATT TCGTGCGACGTGCTGGACCGGGCCGCAGGGCGCCAGCCGCGGGTGACACG GGCCGCGGAGATGGACATGAATATGGATACGTTTGGCACCACGGGCCTCC AACATGCTCGACGCAGGGGTGGACGAGGCCAAAACAGGAACAGGCCGGGA GGAGGGGGCGCAACCAGCGCTGGGGGCCGAGGCGTTCGAGGTGGAGTAGG AGTAGGAAACAGCGCCACAGGAGTCGGGGGCGCAACCGCTGGCGGCGGGC GTGGAGGCGGCGGTGGCGGTCGCGCAGGTGCTGGGCGAGGTCCCGGGGGT GGCGGCCGTGCTGCCGGAAGGGGAGGGTACACTGGGGGTAGTAAGAGCGG CACAAACGTCGGCCAAGACCGAAGGGGAGGTGCGGGGCAAGCACGGCCCA GGCCGAGGGGCGGAAGGGGTAGGGGCAGCCAAGTCGGGCAGGGCCAAAAG TCGCAAGCACCTGCCGCAGCCTCTCAGTCCCAAGCGGTCTGAGGCGCCAG CCGCGGGTGACACGGGCCGCGGAGATGGACATGAATATGGATACGTTTGG CACCACGGGCCTCCAACATGCTCGACGCAGGGGTGGACGAGGCCAAAACA GGAACAGGCCGGGAGGAGGGGGCGCAACCAGCGCTGGGGGCCGAGGCGTT CGAGGTGGAGTAGGAGTAGGAAACAGCGCCACAGGAGTCGGGGGCGCAAC CGCTGGCGGCGGGCGTGGAGGCGGCGGTGGCGGTCGCGCAGGTGCTGGGC GAGGTCCCGGGGGTGGCGGCCGTGCTGCCGGAAGGGGAGGGTACACTGGG GGTAGTAAGAGCGGCACAAACGTCGGCCAAGACCGAAGGGGAGGTGCGGG GCAAGCACGGCCCAGGCCGAGGGGCGGAAGGGGTAGGGGCAGCCAAGTCG GGCAGGGCCAAAAGTCGCAAGCACCTGCCGCAGCCTCTCAGTCCCAAGCG GTCTGA back to top
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