prot_H-canaliculatus_F_contig14266.3350.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14266.3350.1
Unique Nameprot_H-canaliculatus_F_contig14266.3350.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length81
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14266.3350.1 vs. uniprot
Match: D7FRE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE9_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 7.600e-22
Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:   15 IASGPVTSEVWQSVATNTIIGATGGALVGTVLATYRGHSVPFYVASMGTNYAVASLAFFGESLLAR 80
            I+S P  ++ W  VA N+IIGAT GA+ GTVLATYRGHSVPFY ASMGTNYA+ASLAFFG   L R
Sbjct:   18 ISSQPAATDAWTRVAQNSIIGATSGAVFGTVLATYRGHSVPFYAASMGTNYALASLAFFGTEALIR 83
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14266.3350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRE9_ECTSI7.600e-2269.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14266contigH-canaliculatus_F_contig14266:756..2245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14266.3350.1mRNA_H-canaliculatus_F_contig14266.3350.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14266 23..2456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14266.3350.1 ID=prot_H-canaliculatus_F_contig14266.3350.1|Name=mRNA_H-canaliculatus_F_contig14266.3350.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=81bp
MDPNDRRDGEMPPTIASGPVTSEVWQSVATNTIIGATGGALVGTVLATYR
GHSVPFYVASMGTNYAVASLAFFGESLLAR*
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