mRNA_H-canaliculatus_F_contig1419.3299.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: D7G5K9_ECTSI (HA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K9_ECTSI) HSP 1 Score: 555 bits (1429), Expect = 2.200e-191 Identity = 266/304 (87.50%), Postives = 284/304 (93.42%), Query Frame = 1
Query: 1 GSLLVPTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLDAMGFVWDLSDAPFRQVYDALLQYKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILANVVKGLRCYLSIFGDTMVPQGFVVPDGEAWPQECRGQKLGSMLYGLRRRPERLDRHPGVRAELTALGFSWQVPKKGPR 912
G LLVPTSFVVP+T PWPL CQG+RLGAKV+GVRNQSLYVR DVARWYQLDA+GFVWDLSDAPFRQVYDALLQYKA HGNLHVPVAF VPS+ PW +DLWGLALGQ RVLDIRA HRYIRNDPERI+LLNE GFRW DA KASYGNVVRALKAYRKIKGRD SVPS+FVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKG ER+QRR+ELERLGVFAQSREAILANVVKGLR YLS+FG+TMVPQGFVVPDGEAWP+ECR QKLGSMLYGLRR PERL+RHP +RAE+TALGFSW+VPK+G R
Sbjct: 264 GCLLVPTSFVVPETEPWPLSCQGMRLGAKVAGVRNQSLYVRTDVARWYQLDAIGFVWDLSDAPFRQVYDALLQYKAEHGNLHVPVAFSVPSSPPWHQDLWGLALGQ-RVLDIRATHRYIRNDPERIRLLNEVGFRWTDATKASYGNVVRALKAYRKIKGRDLSVPSSFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGEERQQRRMELERLGVFAQSREAILANVVKGLRTYLSVFGNTMVPQGFVVPDGEAWPEECRKQKLGSMLYGLRRNPERLNRHPEIRAEITALGFSWKVPKRGRR 566
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: W4H196_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H196_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.110e-39 Identity = 109/300 (36.33%), Postives = 152/300 (50.67%), Query Frame = 1
Query: 16 PTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLDAMGFVWDLSDAPFRQVYDALLQYKALHGNLHVPVAFCVPS-TAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLP-WPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILANVVKGLRCYLSIFGDTMV-PQGFVVPDGEAWPQECRGQKLGSMLYGLRRRPERL--DRHPGVRAELTALGFSWQVPK 900
P F VPD PWP +G + +V+ VR Q A L+ +GFVWD + AL YK+L+ NL VP F VP A W DLWG LG + V +IR+R + P+R L+ GF W D+ + ++ V AL Y+++ G VP F VP P WP +CW L+LG A+ D+R +G +L +RR L+ LG S E ++ L + +FG T+V PQ FVVP WPQ KLG + +R R + + +RH A+L A+GF W P+
Sbjct: 33 PARFTVPDVTPWPKSLRGRTI--QVARVRRQFKDGVLPTAVVEALNNVGFVWDAKQHNWTLRVLALKTYKSLYHNLLVPYEFTVPPHAATWSRDLWGCKLGVA-VTNIRSRAHQL--PPDRKAELDALGFVW-DSHELTFDIKVLALNTYKQLHGH-VHVPFEFKVPDTHPSWPPTCWKLKLGRAVHDLRCRGDHLTP----ERRDVLDALGFVWDSHELNWDMKLQALATFKQVFGGTLVVPQDFVVPSTAPWPQRSWSMKLGQAVTNMRFRADSMSAERH----AQLEAIGFIWDYPE 317
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A485K2Z3_9STRA (Aste57867_585 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K2Z3_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.380e-39 Identity = 104/296 (35.14%), Postives = 141/296 (47.64%), Query Frame = 1
Query: 16 PTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLDAMGFVWDLSDAPFRQVYDALLQYKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPS-FLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILANVVKGLRCYLSIFGDTMVPQGFVVPDGEAWPQECRGQKLGSMLYGLRRRPERLDRHPGVRAELTALGFSWQVPK 900
P F VP PWP G + V+ VR Q LD GFVWD + AL YKALH NL VP + VP+ APW +DLWG LG + V +IR+R + P+R L F W D+ + ++ V AL+ Y+++ G VP F VP WP +CW L+LG A+ D+R +G +L R L+ LG S E V L + FG ++PQ FVVP WP+ KLG + +R R E + +A+L A+GF W P+
Sbjct: 31 PARFTVPAADPWPPQLHGRTI--HVAKVRKQYKDGTLPAPVVAALDNHGFVWDAKQHNWNLRLQALRTYKALHDNLLVPYEYTVPAAAPWAKDLWGCKLGVA-VTNIRSRVDLL--TPDRKAALEALDFVW-DSHELTFDIKVLALQTYKRLHGH-VHVPFEFKVPDGSREWPATCWKLKLGRAVHDLRCRGDHLLPARRHM----LDTLGFVWDSHELNWDMKVHALTTFKQEFGTLLIPQDFVVPSAAPWPERTWRMKLGQAVTNMRFRVESMS--DDRQAQLEAIGFIWDYPE 313
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A7S3YVR9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YVR9_9EUKA) HSP 1 Score: 150 bits (378), Expect = 3.120e-37 Identity = 89/245 (36.33%), Postives = 138/245 (56.33%), Query Frame = 1
Query: 178 SDAPFRQVYDALLQYKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILANVVKGLRCYLSIFGDTMVPQGFVVP-DGEAWPQECRGQKLGSMLYGLRR--RPERLDRHPGV-----RAELTALGFSW 888
S+ + +V+++L++YK L+GNL +P F VP W LW LGQ RV +IR+ Y++NDP RI++LN+ GF W D + + V+ALK Y++I G + SV AF VP PWP+ WG+ LG + +IR+ ++K R++ L++LG ++ V+ L+ Y I G+ +VP+ FV+P D WP+ RG +LG + RR R + + G+ R EL +GF W
Sbjct: 63 SEEKWMKVWESLVRYKKLYGNLVIPHGFVVPQNDQWPSHLWDFGLGQ-RVRNIRSIGLYVKNDPFRIEMLNDLGFVWDDN-EWRFKQTVQALKTYKRIYG-NLSVNVAFTVPEEEPWPEMTWGVNLGERVHNIRAHDLHIKNYPERKK--VLDQLGFVWSDELWRFSHFVQALKIYKEIHGNMLVPRSFVIPFDDPRWPRAFRGVRLGERVLRWRRKKRDDNKELRVGLQLAKQRKELNDIGFPW 302
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A6A3MBC8_9STRA (HA domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3MBC8_9STRA) HSP 1 Score: 150 bits (379), Expect = 8.930e-37 Identity = 103/299 (34.45%), Postives = 150/299 (50.17%), Query Frame = 1
Query: 1 GSLLVPTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLY---VRADVARWYQLDAMGFVWDLSDAPFRQ-VYDALLQYKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLG-VFAQSREAILANVVKGLRCYLSIFGDTMVPQGFVVPDGEAWPQECRGQKLGSMLYGLRRRPERLDRHPGVRAELTALGF 882
G VP FVVP WP GLR+G VS +R+Q Y V D+ R L+ +GFVWD + + + + AL ++ L G+ VP +F VPS W ++ WGL +G + V IR++ Y L E GF W ++ AL+ ++++KG VP +FVVPS WP WGLR+GT + IRSKG Y V R + RLE LG V+ ++ L + + G VP+ FVVP E WP + G ++G+++ G+R + + + L LGF
Sbjct: 322 GHCRVPKIFVVPSDENWPKESWGLRIGTVVSSIRSQGTYSTQVSRDMTR---LEELGFVWDFFEHEWSERIRPALETFQRLKGHCRVPRSFVVPSDENWPKESWGLRIG-TVVNGIRSQGYYSTQVSRDKARLEELGFVWDFFEHEWSERIMPALETFQRLKGHC-RVPRSFVVPSDENWPIESWGLRIGTVVGGIRSKGNYSTQVSRDKARLE--ELGFVWDFFEHEWSERIMPALETFQRLKGHCRVPRSFVVPSDENWPTKSWGVRIGNVVSGIRSKGNYSTQVSRDKTLLEELGF 613
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A833SEN1_PHYIN (Helicase associated domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SEN1_PHYIN) HSP 1 Score: 143 bits (360), Expect = 1.190e-34 Identity = 97/271 (35.79%), Postives = 133/271 (49.08%), Query Frame = 1
Query: 1 GSLLVPTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLDAMGFVWDLSDAPFRQ-VYDALLQYKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILANVVKGL-RCYLSIFGDTMVPQGFVVPDGEAWPQECRGQKLGSML 807
G LV SF+VP APWP G+ LG V+ +R++ Y R + L ++ FVWD+ + + + + AL Y A +G+ VP F VPS PW + WG+ LGQ+ V +IR R+ Y R ++L F W V ALK Y G VP++FVVPS PWP+ WG++LG L IRS Y R LE LG+ Q N V L Y SI G +P FV+P + WP+ G +LG ++
Sbjct: 232 GHCLVKISFIVPSQAPWPEKAWGMLLGKTVNPIRSRLSYSRHALRDAKILKSLDFVWDVDEYVWTERIVPALKAYVAQNGHCLVPGRFVVPSHDPWPKKAWGMKLGQT-VSNIRLRYNYRRLVLRDKEILTSLEFTWNVKDYVWTERFVPALKVYVAQNGHCL-VPASFVVPSHDPWPKKAWGVKLGEILKRIRSARSYFSHFGRNAE--VLESLGLSLQLTPKGYENRVSPLLETYASIKGSRDIPDNFVIPPEDPWPETVWGVRLGLIV 498
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A3R7DL67_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DL67_9STRA) HSP 1 Score: 143 bits (361), Expect = 6.590e-34 Identity = 109/305 (35.74%), Postives = 152/305 (49.84%), Query Frame = 1
Query: 16 PTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLDAMGFVWDLSDAPFRQVYDALLQYKALHGNLHVPVAFCVPS-TAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLP-WPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFA----QSREAILANVVKGLRCYLSIFGDTMV-PQGFVVPDGEAWPQECRGQKL-GSMLYGLRRRPERL--DRHPGVRAELTALGFSWQVPK 900
P F VPD PWP +G + +V+ VR Q A L+ +GFVWD + AL YK+L+ NL VP F VP A W DLWG LG + V +IR+R + P+R L+ GF W D+ + ++ V AL Y+++ G VP F VP P WP +CW L+LG A+ D+R +G +L +RR L+ LG S E ++ L + +FG T+V PQ FVVP WPQ KL G + +R R + + +RH A+L A+GF W P+
Sbjct: 23 PARFTVPDVTPWPKSLRGRTI--QVARVRRQFKDGVLPTAVVEALNNVGFVWDAKQHNWTLRVLALKTYKSLYHNLLVPYEFTVPPHAATWSRDLWGCKLGVA-VTNIRSRAHQL--PPDRKAELDALGFVW-DSHELTFDIKVLALNTYKQLHGH-VHVPFEFKVPDTHPSWPPTCWKLKLGRAVHDLRCRGDHLTP----ERRDVLDALGYVPLFVWDSHELNWDMKLQALATFKQVFGGTLVVPQDFVVPSTAPWPQRSWSMKLVGQAVTNMRFRADSMSAERH----AQLEAIGFIWDYPE 312
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A7S3QCY2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCY2_9STRA) HSP 1 Score: 143 bits (361), Expect = 7.220e-34 Identity = 92/250 (36.80%), Postives = 136/250 (54.40%), Query Frame = 1
Query: 220 YKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKA-------SYGNVVRALKAYRKIKGRDFS--VPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLK---GVERRQRRLELERLGVFAQSREAILANVVKGLRCYLSIFGDTMVPQGFVVPDGEA-WPQECRGQKLGSMLYGLRRRPERLDRHPGVRAELTALGFSWQVPKKGPRGPRKRK 930
YKA +G+L VP F VPS PW E WGL LGQ RV IR+ +Y+ +D ER K+L++ GF W A + ++ + AL YRK D S VP+ F+VP++ PWP++ G+ LG + +RSK YLK G + + + E G A + +A NV L Y I GD +VPQ F+V +G + W + G +LG+ + +R + + +P + L LGF W++P G + RK+K
Sbjct: 136 YKAAYGDLKVPSRFVVPSMPPWPESGWGLKLGQ-RVASIRSTGKYVDDDDERRKVLDDMGFLWRLRAPSPDKKVDVTFEQIYDALVTYRKEIQTDESLTVPTNFIVPNYDPWPEASRGMPLGKKIPTVRSKA-YLKANPGAKEKLSEIGFEFDGKVAAN-DARFNNVYDALVRYKEINGDLLVPQPFIVAEGSSDWEERFWGLRLGARVNAIRSQGTFVKTNPSRKELLNKLGFEWELPSAGKKRGRKKK 382
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A813EHN7_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EHN7_POLGL) HSP 1 Score: 137 bits (344), Expect = 1.240e-31 Identity = 103/304 (33.88%), Postives = 151/304 (49.67%), Query Frame = 1
Query: 1 GSLLVPTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRAD-------VARWYQLDAMGFVWDLSDAPF-RQVYDALLQYKALHGNLHVPVAFCVPSTAPWQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILAN-VVKGLRCYLSIFGDTMVPQGFVVPDGEAWPQECRGQKLGSMLYGLRRRPERLDRHPGVRAELTALGFS 885
G L V SF +PD P +G +LG V +R+QS V+ R L+ +GFVWD D F Q+ AL YK HG+L +P +F +P + + L GL LGQ V+ IR+ ++++PER+++L+E GF W G V+ AL YR G + VPS + +P+ P+ LG + IRS Y+ G R RR L+ LG + ++ I ++ +R +L FG + VP+ VVP+ PQ RG KLG + +R + L +P R L AL S
Sbjct: 145 GHLNVGPSFCLPDDDAVPESIRGFKLGPTVCRIRSQSTSVKTRPQQRLVLAQRRLVLEELGFVWDRHDFVFTHQLLPALKTYKEQHGHLAIPASFAMPDSPDVPDLLRGLKLGQM-VMRIRSARFLVKDNPERLEVLDELGFVWNSEEFIFEGRVLAALDWYRCEFG-NLLVPSDYRIPNRKNIPRLLREFELGHVVSRIRSGKAYVNG--RPDRRKALDELGFIWEVQDFIFEKQILPSIRWFLIEFGYSDVPESLVVPNSSELPQLLRGLKLGQICKDIRLKQAWLKGYPDRRKALLALSAS 444
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Match: A0A485KG42_9STRA (Aste57867_6920 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG42_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.640e-31 Identity = 105/320 (32.81%), Postives = 151/320 (47.19%), Query Frame = 1
Query: 1 GSLLVPTSFVVPDTA-PWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLDAMGFVWDLSDAPFRQVYDALLQYKALHGNLHVPVAFCVPSTAP------------------------WQEDLWGLALGQSRVLDIRARHRYIRNDPERIKLLNEAGFRWADAAKASYGNVVRALKAYRKIKGRDFSVPSAFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYLKGVERRQRRLELERLGVFAQSREAILANVVKGLRCYLSIFGDTMVPQGFVVPDGEAWPQECRGQKLGSMLYGLRRRPERLDRHPGVRAELTALGFS 885
G + VP SFVVP A WP LGA+V+ VR++ L D AR +LDA+GFVW++++ V AL Y ALHG+++VPV+F VPS+ W GL LG + V+ +R+ + P ++ +L++ GF W + S+ +RAL +R I VP +F VP PWP+ G++LG + D+R +R L+ +G + +E A + L Y ++FG VP FVVP WPQE G +LGS + L R G AEL G S
Sbjct: 216 GHVAVPQSFVVPPAANAWPTTLWHYALGARVTDVRHKVL--SGDRAR--ELDALGFVWEVTEYKRAVVLAALENYHALHGHVNVPVSFVVPSSTGDXXXXXXXXXXXXXXXXXXXXEPGWPRLFHGLRLGNA-VMSLRSHASQL--SPVQVDVLDDLGFVW-EVHSESWDRRLRALACFRDIFDH-LRVPQSFCVPFEEPWPRDVRGMKLGRVVKDLRESATP-------SQRATLDAMGFVWKLKEWRQAQTIDCLEAYHAVFGHRNVPATFVVPKTAPWPQEFYGFRLGSAVRTLLMR--------GDLAELNGFGGS 511 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1419.3299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1419.3299.1 >prot_H-canaliculatus_F_contig1419.3299.1 ID=prot_H-canaliculatus_F_contig1419.3299.1|Name=mRNA_H-canaliculatus_F_contig1419.3299.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=373bp GSLLVPTSFVVPDTAPWPLCCQGLRLGAKVSGVRNQSLYVRADVARWYQLback to top mRNA from alignment at H-canaliculatus_F_contig1419:21501..26941- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1419.3299.1 ID=mRNA_H-canaliculatus_F_contig1419.3299.1|Name=mRNA_H-canaliculatus_F_contig1419.3299.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5441bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1419:21501..26941- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1419:21501..26941- >mRNA_H-canaliculatus_F_contig1419.3299.1 ID=mRNA_H-canaliculatus_F_contig1419.3299.1|Name=mRNA_H-canaliculatus_F_contig1419.3299.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2238bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1419:21501..26941- (Hapterophycus canaliculatus Oshoro5f female)back to top |