prot_H-canaliculatus_F_contig1419.3298.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1419.3298.1
Unique Nameprot_H-canaliculatus_F_contig1419.3298.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length458
Homology
BLAST of mRNA_H-canaliculatus_F_contig1419.3298.1 vs. uniprot
Match: D7G7N3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7N3_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 7.410e-83
Identity = 239/400 (59.75%), Postives = 267/400 (66.75%), Query Frame = 0
Query:   71 MCEVYERISQICVQVHVDDQKGEIRFAPVPEIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----VARYGCDPRNAWSPWSYAVLTVDGRTAQDVVPPPAVSFVETLVTVRSDLDPFLHVEALTYVPSGGATGEDPGXXXXXXXXXXXXXXXXXXXXXXXAGGRFLTFGLSSRNCVIVGSAFLLVGLLLLVQPVLALRSWFRQAREEDGAGXXXXXXXXXXXXXXXXXXXXXXMMMPGKAGGQWRYGQLETEWAEDGSEYSDDAGFEDDHRRHSVGDGDDDDWGTEGNWHGQQTRSSLGMAPSPSEGDGLNATMGSPGGASAGDGFAQDTLRRRAADGGALXXXXXXX--------VRGDVGGEPGGIQLGPMGGRIGRGSEAAFI 457
            MCEVYER+S +CVQVHVDD  GEI FAPV EIGSG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ARYGCDPRNAWSPW YAV+TV+GRT  DVVPP  ++F +TLVT RSDLDPFLHVEALTY PS G  G    XXXXX                   GG+FLTFGLSS N  +VGSAFL+VGLLLLVQPVLAL++W+R    E G G        XXXXXXXXX         GK  GQWRYGQLET+W +DGSE+ D   +E +       D DDD WG+EG+W G+ T S +G  PSPSEG+   A+  +P     G  F QD+LRRRAADGGAL  XXXXX        +RGD GG    IQLGPMG + GRG EA  I
Sbjct:    1 MCEVYERLSTVCVQVHVDDNNGEISFAPVAEIGSGDSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETARYGCDPRNAWSPWGYAVVTVEGRTVLDVVPP-TITFSKTLVTTRSDLDPFLHVEALTYDPSSGGIGGGXXXXXXXAEGASGEGISPEGSVGGGGGGQFLTFGLSSWNSAVVGSAFLVVGLLLLVQPVLALKAWWR----EGGVGSDEGGPTGXXXXXXXXXRSGRG----GKLRGQWRYGQLETDW-DDGSEFVDGGVYEGE-------DDDDDGWGSEGDWQGE-TSSGVGRPPSPSEGNHFQASA-TP---RLGRRFMQDSLRRRAADGGALGTXXXXXXXXXXXXXIRGDAGG----IQLGPMG-KSGRG-EANLI 372          
BLAST of mRNA_H-canaliculatus_F_contig1419.3298.1 vs. uniprot
Match: A0A835YNJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.840e-17
Identity = 71/256 (27.73%), Postives = 101/256 (39.45%), Query Frame = 0
Query:   35 TDWAPLTRIRQEHAPMPAPETKCMQVFGGVHNYKTKMCEVYERISQICVQVHVDDQKGEIRFAPVPEIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVARYGCDPRNAWSPWSYAVLTVDGRTAQDVVPPPAVSFVETLVTVRSDLDPFLHVEALTYVPSGGATGEDPGXXXXXXXXXXXXXXXXXXXXXXXAGGRFLTFGLSSRNCVIVGSAFLLVGLLLLVQPVLALRSWFRQAREEDGAG 290
            T + PLT  R+  AP PAPETKCM    GV ++ ++ C  Y+ ++ +CVQV +    G    AP+                                             V  YGC    AWSP +YA L ++G +  DV  PP V+     +TVRS+LDP+LH + +T+                                        +TFGLSSR+C+IVG++      LL      A R + R A  +   G
Sbjct:  106 TVYFPLTTTRRARAPQPAPETKCMVQQHGVLDHASQECVSYQALTSLCVQVRLSPG-GAASLAPMVRARKSS-------------------------------------GVPSYGCSAAAAWSPVAYAPLPLEGHSTDDVAVPP-VNLTALTITVRSELDPYLHAQVITHDS--------------------------------------MTFGLSSRSCLIVGASCXXXXXLLAALTAAAARRYCRDAMADPTGG 284          
BLAST of mRNA_H-canaliculatus_F_contig1419.3298.1 vs. uniprot
Match: A0A6H5JGC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.130e-6
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0
Query:   29 VVAEMETDWAPLTRIRQEHAPMPAPETKCMQV 60
            V+AEM T+W PLTRIR+EHAPMPAPETKCMQV
Sbjct:  431 VLAEMVTEWTPLTRIREEHAPMPAPETKCMQV 462          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1419.3298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7N3_ECTSI7.410e-8359.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNJ9_9STRA5.840e-1727.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JGC6_9PHAE1.130e-684.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 277..457
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..276
NoneNo IPR availableTMHMMTMhelixcoord: 253..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1419contigH-canaliculatus_F_contig1419:2511..18807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1419.3298.1mRNA_H-canaliculatus_F_contig1419.3298.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1419 2511..18807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1419.3298.1 ID=prot_H-canaliculatus_F_contig1419.3298.1|Name=mRNA_H-canaliculatus_F_contig1419.3298.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=458bp
LGGEWRWQRQRQRQRRGETKAARRGREAVVAEMETDWAPLTRIRQEHAPM
PAPETKCMQVFGGVHNYKTKMCEVYERISQICVQVHVDDQKGEIRFAPVP
EIGSGSSSSSSSSSGGGGGSSGSSGRDGEGEEEEEEEKEEEEEAVARYGC
DPRNAWSPWSYAVLTVDGRTAQDVVPPPAVSFVETLVTVRSDLDPFLHVE
ALTYVPSGGATGEDPGGGGGGGGMGGESLAAPEAAAAAGAGGRFLTFGLS
SRNCVIVGSAFLLVGLLLLVQPVLALRSWFRQAREEDGAGGAGGFGGGRG
AGRGGGGGGGGMMMMPGKAGGQWRYGQLETEWAEDGSEYSDDAGFEDDHR
RHSVGDGDDDDWGTEGNWHGQQTRSSLGMAPSPSEGDGLNATMGSPGGAS
AGDGFAQDTLRRRAADGGALGGGGGGGVRGDVGGEPGGIQLGPMGGRIGR
GSEAAFI*
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