mRNA_H-canaliculatus_F_contig1417.3285.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 1.930e-153 Identity = 239/345 (69.28%), Postives = 269/345 (77.97%), Query Frame = 1
Query: 25 GKREGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHH-TVILPSADVRSGNKTACLAEHASSPGRGYIS-----ETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRDDTPLDAGQEIWDPYACLRGYNIGGHVQSARSSTTAKRKA 1041
GKR+G+V+V ELL+FIFPKSLQHPLSTGRLYAF +YGPLDS S L +G NG+RV+STWEIDTMCLQFE+EDILQVY+SGGRPLFVLNDAQK+EVIAQADSHLKTAKGRGYRRQVTR EVV LLS L R ++GLVSFHDAQKLI+GYR++QIARFKVIFP I G A K+ + ++ G KT L G G S TV GR + G L E + G GA+R G RAKFSA+VAPAEMF+K+MG TPAG+A+HTSKLLSTRAYKV NIADGNDPGLTQNVKLIRDD + GQ WDPYACLRGYNIGGHV+SARSSTTAKRKA
Sbjct: 11 GKRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKT--LDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGGGAKR---KGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA) HSP 1 Score: 219 bits (558), Expect = 5.480e-66 Identity = 137/330 (41.52%), Postives = 186/330 (56.36%), Query Frame = 1
Query: 67 FIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSA-GLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRDDTPLDA-----GQEIWDPYACLRGYNIGGHVQSARSSTTAKRK 1038
F+FP++LQHP+STGRL+AFG YGPLD+ +RL +G G+ V+ WE+DTMC QFE+EDILQ+Y+ G+ L + Q +E++AQADS LK AKG+ +QVT EV + S+L D A GL+ FHD Q+ I+ YRQ I K +FP VT AK+ ++SG + + G + T N P T GR R + A VAPA MFL++ GL VAS T+KLL +A+ + NIADGN LT NV+L+R + P D+ G+ WD RG +G V++ +SSTT KRK
Sbjct: 7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPE-VTSKAKR---------IGSLKSGPEFTPI---------GPLGATY-------NEFGPGRST-------------GRRTRGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSE-PKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK) HSP 1 Score: 216 bits (549), Expect = 7.180e-64 Identity = 129/337 (38.28%), Postives = 190/337 (56.38%), Query Frame = 1
Query: 28 KREGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRDDTPLDAGQEIWDPYACLRGYNIGGHVQSARSSTTAKRK 1038
K + +V + L+ F+FP LQHPLSTGRL+AFG+YGPLD S+L +G G+ ++ +E+D MC +FE+E ILQVYL G +L++++ + VIAQAD K AKG+ QV+R E L ++L RD+ G +SFHD Q+ I+ YR+++IA KVIFP ++ P + +S+ +P + D G R+ ++ S VAP EMF K G T ++S ++LLS A+++ +I GN LTQNV+L+R+ D G++ WD +CLRG NIGGHV++A+S+TT KRK
Sbjct: 37 KAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELM---GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQQAAVSDAG----------EPGSXXXXFKLMDAG-RQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGRK-WDSNSCLRGSNIGGHVKTAKSATTVKRK 357
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.580e-52 Identity = 121/345 (35.07%), Postives = 167/345 (48.41%), Query Frame = 1
Query: 7 GPCEVAGKRE--GRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHT--------------------SKLLSTRAYKVGNIADGNDPGLTQNVKLIRDDTPLDA-GQEIWDPYAC 972
G C + +R RV +++LL FIFP LQHPLS+GRL FG YGP +LH+G+ GE V+ WE+D+MC ++ED+LQVY+S RPL L AQ++E+IAQ+ Q+TR +V+ L + R + SFHD QK+++ YR ++A K+++P LA H+ SP R T G P R G + KFS DVAPA MFLK+ GL +A+ +KLLST+A+K+ +I DGN+P LT NV+LIR+DT G WD C
Sbjct: 14 GDCGIPRRRAKAARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPS-----------------------------LAAHSKSPPRKRAQSTEKGTATAAQRQSPISR-----------------GHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQGGAQWDETCC 302
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.610e-40 Identity = 72/167 (43.11%), Postives = 112/167 (67.07%), Query Frame = 1
Query: 34 EGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFP-----PIVTGF 519
E V +++L+ F+FP L HPLSTGRLYAFG YGPLD + +L +G G+ VL WE+D MC QFE+ED LQVY+S GR L L++ Q+ E+I+QAD+ +K+ +G+G Q+++ EV + + G + FH+ Q+ +L +R+++I + +V++P P+ GF
Sbjct: 75 ESLVSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYPLVARKPLRVGF 241
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.020e-37 Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 97 LSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLA 597
+STGRL AFG +GPLD +RL +G G+ V+S WE+DTMC QFE+EDILQVY+ G+ L + + E++AQAD+ +K AKG+ +QVT EV +L ++L RD GL++FHD Q+ I+ +R+ I KVIFP + G K PS + G K+ A
Sbjct: 1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGKPGASP----PSGERHGGQKSGTSA 163
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.350e-35 Identity = 99/312 (31.73%), Postives = 150/312 (48.08%), Query Frame = 1
Query: 31 REGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRDDTPLD-AGQEIWDP 963
+ G +D+++LL+F+FPK LQHP S GRL+ FG+YGPLDS SRL +G G V++ E+ TM + E+EDIL VY + L+ +++EV+ Q D LK Q T ++ L S LLRD+ G ++FHD Q+ ++ R ++ C+ E R + + V R + TL T G + + AP+ FLK++G T A+ S+LLSTRA+++ + DGN P LTQNV+L+R D ++ W+P
Sbjct: 207 KSGAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVV------------------------------------CMKE------RLHPALGVLVRNQFARTLTRLTATKGDSL------------------VNGAPSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPDKAQQFVNRDPWNP 447
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR) HSP 1 Score: 138 bits (348), Expect = 2.390e-33 Identity = 102/322 (31.68%), Postives = 152/322 (47.20%), Query Frame = 1
Query: 25 GKREGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIR-DDTPLDAGQEIWDPYACLRGYN 987
G + + +++LL+F+FP+ LQHP S GRL+ FG+YGPLD SRL +G G +++ E+ TM + E+EDIL VY + L+ +++EV+ Q D LK Q T ++ L + L RDS G +SFHD Q+ +L R ++ K P LAE P R S T+T +V T ++ + AP+ FLK++G T A+ S+LLSTRA+++ + DGN P LTQNV+L+R D +E W+P R +N
Sbjct: 233 GGKTAVMGLDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDSDGNMSFHDMQQAVLKERLRRVVCMKERLHP----------------------------ALAE----PVRNRFSRTLT---RVTAT-------------------------KSSGLVNGAPSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFDKAQKFVEREPWNPNCQKRSHN 483
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A329S5P5_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5P5_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.980e-32 Identity = 97/302 (32.12%), Postives = 143/302 (47.35%), Query Frame = 1
Query: 22 AGKREGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRDD 927
+G + + + +LL+F+FP+ LQHP S GRL+ FG+YGPLD+ SRL +G G V++ E+ TM + E+EDIL VY + L+ +++EV+ Q D LK Q T ++ L + L RDS G +SFHD Q+ +L R ++ K P LAE P R S T+T T+ ++ G AP+ FLK++G T A+ S+LLSTRA+++ + DGN P LTQN +L+R D
Sbjct: 230 SGGKTAAMGLGQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKRFP------QYTPRDIETLFAPLPRDSEGSMSFHDMQQTVLKERLRRVVCMKERLHP----------------------------ALAE----PVRNRFSRTLTRL-----TVTKSDSLVNG-----------------------APSSFFLKDIGATNVESAAFVSRLLSTRAFQICQMEDGNSPELTQNARLVRPD 460
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Match: A0A8J5M763_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M763_9STRA) HSP 1 Score: 136 bits (343), Expect = 8.530e-32 Identity = 98/302 (32.45%), Postives = 144/302 (47.68%), Query Frame = 1
Query: 22 AGKREGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKSRLHAGRNGERVLSTWEIDTMCLQFEKEDILQVYLSGGRPLFVLNDAQKQEVIAQADSHLKTAKGRGYRRQVTRAEVVQLLSELLRDSAGLVSFHDAQKLILGYRQEQIARFKVIFPPIVTGFAKKKQHHTVILPSADVRSGNKTACLAEHASSPGRGYISETVTGREKVGNTLDPAERTTGGHIRDDGARRGGRIGRRAKFSADVAPAEMFLKNMGLTPAGVASHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRDD 927
+G + + +++LL+F+FP+ LQHP S GRL+ FG+YGPLD+ SRL +G G V++ E+ TM + E+EDIL VY + L+ +++EV+ Q D LK Q T ++ L + L RDS G +SFHD Q+ +L R ++ K P LAE P R S T+T T+ ++ G AP+ FLK++G T A+ S+LLSTRA+++ I DGN P LTQN +L+R D
Sbjct: 616 SGGKTAAMGLDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKRFP------QYTPRDIETLFAPLPRDSEGSMSFHDMQQTVLKERLRRVVCMKERLHP----------------------------ALAE----PVRNRFSRTLTRL-----TVTKSDSLVNG-----------------------APSSFFLKDIGATNVENAAFVSRLLSTRAFQICQIEDGNSPELTQNARLVRPD 846 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1417.3285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1417.3285.1 >prot_H-canaliculatus_F_contig1417.3285.1 ID=prot_H-canaliculatus_F_contig1417.3285.1|Name=mRNA_H-canaliculatus_F_contig1417.3285.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=348bp MDGPCEVAGKREGRVDVNELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSKback to top mRNA from alignment at H-canaliculatus_F_contig1417:6868..8829- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1417.3285.1 ID=mRNA_H-canaliculatus_F_contig1417.3285.1|Name=mRNA_H-canaliculatus_F_contig1417.3285.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1962bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1417:6868..8829- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1417:6868..8829- >mRNA_H-canaliculatus_F_contig1417.3285.1 ID=mRNA_H-canaliculatus_F_contig1417.3285.1|Name=mRNA_H-canaliculatus_F_contig1417.3285.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2088bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1417:6868..8829- (Hapterophycus canaliculatus Oshoro5f female)back to top |