mRNA_H-canaliculatus_F_contig1416.3279.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1416.3279.1
Unique NamemRNA_H-canaliculatus_F_contig1416.3279.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A6H5K1H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H5_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 1.260e-154
Identity = 316/640 (49.38%), Postives = 382/640 (59.69%), Query Frame = 2
Query:   98 VILIKRHLLLFRRPVAATLPSAGAASTRPVRN-----MIA--RRTLLLLDAPAALDTKGLLPLPSKWAGHAASRCHLRRKGVQSSPSSVR---CCSSSPPG---------TPAHDVSVSSGGKSSSTSPKWKLYDHKKHPPVPLSLEEYVALGPRYRPQPPRRQERYTALREPTTATMNSEPIDGRDGDCSRSRSSGGRSEERXXXXSRHEEGQQGAGEWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPG---------------------------------SPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDEVDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYESCGGKTAMGDGGRER-RPGEVVDGDDRADKDTKQTRLGGVFDKEERMLVIEVGRDRNPVL 1858
            ++L   + L F   +A    +A  A+T  +RN     M+   RR++ +L   A      L P   K +   + RCHL+ +  Q SP  VR     S+SP             A D S S+ G +      W LYD+ K PPVP+SL EYV+LGPRY+     RQ+R      P +AT  S+  D          S        XXXX    + +    +WLSA+ D+A SLG+DP  STEA HRRIFHLYLPVYFWL+ LL    G                                    S  A +S + G+    P+VVGINAPQGCGKTT+VSEMQRML+KAG+  VV+SIDDFYLTGAEQDALAAR+P N LLQVRGNAGTHDLALALRTIRAL  RG+ G    +S     +P S+A+   A+          +RVPRYDKSARGGKGDRAP+ EW VV+  PD++LLEGWMLGFEALPD+S LL+SA E   G  +GLG VN FLKDY+ LH+EVDAWLVLKTAEPE VFEWRAEAERRMR AGR GMS+E+VRDFCSRYMPAYRAYLPGLY+ C    A  +   +  R G+   GD  + K T      GV  +  + LVIEVGRDRNPVL
Sbjct:   12 ILLAAYNRLPFCSALAVPSTAAAPATTGQLRNNSTMMMLGGRRRSVQVLWQSAPYHVPSL-PSAHKVSRDTSPRCHLQMRRGQPSPPRVRFRFSSSASPTAGGAAACIRTAAAADTSESAAGNT------WNLYDNTKCPPVPMSLMEYVSLGPRYQ----ERQQRMDKTEVPMSATKTSKHDD----------SXXXXXXXXXXXXXADADDEHAQEDWLSAAADIAASLGVDPLKSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAAXXXXXXXXXXXARDVAAGVQTANEHPRSSRGDVSKRARASSNTGSDKGPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQDALAARFPTNPLLQVRGNAGTHDLALALRTIRALT-RGDDGTSDVDSRDLRPSPPSSAEDPAAQ--------DCVRVPRYDKSARGGKGDRAPEGEWSVVSMPPDVLLLEGWMLGFEALPDDSPLLLSAAEADGGTSDGLGAVNTFLKDYQSLHNEVDAWLVLKTAEPEMVFEWRAEAERRMREAGRAGMSDEEVRDFCSRYMPAYRAYLPGLYDRCRAADAGVEESTDHDRLGQPPQGDGGSRKLTS-----GVV-RARQTLVIEVGRDRNPVL 615          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: D8LG59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG59_ECTSI)

HSP 1 Score: 446 bits (1146), Expect = 2.740e-143
Identity = 260/434 (59.91%), Postives = 293/434 (67.51%), Query Frame = 2
Query:  695 EWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGS----------------------PPASSSP---------------SRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGR--GNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDEVDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYESCGGKTAMGDGGRER-RPGEVVDGDDRADKDTKQTRLG------GVFDKEERMLVIEVGRDRNPVL 1858
            +W SA+ DLA SLGIDP TSTEA HRR+FHLYLPVYFWL  LL    G   S                      P A++ P               + G+  + P+VVGINAPQGCGKTT+VSEMQRML+ AG+H VV+SIDDFYLTG EQDALAAR+P N LLQVRGNAGTHDLALALRTIRAL  R  G S G S +    PS P+S      AE    Q+    +RVPRYDKSARGGKGDRAP+ EW VV+  PD++LLEGWMLGFEALPD+S LL+SA E   G  +GLG VN FL+DY+ LHDEVDAWLVLKTAEPE VFEWRAEAERRMR AGRPGMS+E+VRDFCSRYMPAYRAYLPGLY  C    A  D   +  R G+   GD   D D  Q  LG      GV  +  + LVIEVGRDRNPVL
Sbjct:   34 DWRSAAADLAASLGIDPLTSTEAQHRRVFHLYLPVYFWLELLLRQSRGSAASXXXXXXXXXXXXXXTRGVAAGVPTANTHPRSSGGDVSKRARARSNSGSNKEPPVVVGINAPQGCGKTTIVSEMQRMLENAGHHCVVMSIDDFYLTGTEQDALAARFPTNPLLQVRGNAGTHDLALALRTIRALTRRDDGTSDGDSRDL--RPSPPSS------AEDPAAQD---CVRVPRYDKSARGGKGDRAPEGEWSVVSTPPDVLLLEGWMLGFEALPDDSPLLLSAAEADGGTSDGLGAVNTFLEDYQSLHDEVDAWLVLKTAEPEMVFEWRAEAERRMREAGRPGMSDEEVRDFCSRYMPAYRAYLPGLYGRCRAADAGVDESTDGDRLGQPTQGDGGRD-DVVQESLGSRKLTSGVV-RARQTLVIEVGRDRNPVL 454          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A0G4I9K3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9K3_9ALVE)

HSP 1 Score: 249 bits (636), Expect = 3.900e-69
Identity = 148/327 (45.26%), Postives = 186/327 (56.88%), Query Frame = 2
Query:  698 WLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDEVDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLY 1678
            W      LA +L       + A  +RIF  YLPV+FW+  LL +   R G       P +G    +PLV+G++APQGCGKTTLV+ ++ ML  AG  S VVS+DDFYL G+ QD LA ++P+N LL+ RGNAG+HDL L   T+ +L   G S                                  I VP YDKS RGG+GDRAP+ EWG V+   D+VL EGWMLGF   P ES       EE  G    L  VN  L+ Y   H  VDAW+V++ A+P+ VF+WR + E  M+ AG+PGMSEEQVRDF  R+MPAYR YLP LY
Sbjct:  149 WEKWGRFLASALQTKYEGMSVASQKRIFWFYLPVFFWVMELLRVWEQRQG-------PGKG---KVPLVLGMSAPQGCGKTTLVTFLKDMLAAAGKKSAVVSVDDFYLRGSAQDELAEKFPSNGLLRFRGNAGSHDLQLGCETLESLRKAGPS--------------------------------DSIPVPFYDKSLRGGRGDRAPESEWGSVSGPLDLVLFEGWMLGFP--PVESR------EEAIGVDPNLEQVNENLRTYDRWHGLVDAWMVVEIADPQCVFKWRQQQEEAMKRAGKPGMSEEQVRDFVDRFMPAYRLYLPPLY 425          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A7S0L905_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L905_9EUKA)

HSP 1 Score: 242 bits (618), Expect = 1.780e-68
Identity = 145/338 (42.90%), Postives = 181/338 (53.55%), Query Frame = 2
Query:  695 EWLSASVDLAISLGIDPSTSTEAHHR--------RIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDEVDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYES 1684
            +W +A   L  SLG D + + E            RIFHLYLP+YFW RH + +     G P               + +G++APQGCGKTTLV+ ++ M    G     VSIDDFY+TGAEQ+ L+A +P+N L +VRGNAGTH+LAL   TI AL  RG                                    + +PRYDK+ARGGKGDR P   W V  E PD+VLLEGWM GF+ LP     L +          GL  +NA L  Y      +D+W+VL   + E VF WR +AER M   GRPGMS+E+VRDF  RYMPAY AYLPGLY +
Sbjct:   31 QWAAAGALLLSSLGSDRTDTCELMVEDLDEELAVRIFHLYLPIYFWCRHRVRLVAESGGGP---------------VAIGLSAPQGCGKTTLVTALKEMFLMDGLVCADVSIDDFYITGAEQEQLSASHPSNPLWKVRGNAGTHELALGSSTISALL-RGE---------------------------------REVPIPRYDKAARGGKGDRKPRSAWPVQVEAPDVVLLEGWMAGFKPLPSAHPTLSTNA--------GLPEINAALGAYDAWDVLLDSWVVLAVDDIEHVFNWRLQAERGMAATGRPGMSDEEVRDFVIRYMPAYNAYLPGLYSA 311          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A2K3D6U6_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D6U6_CHLRE)

HSP 1 Score: 244 bits (622), Expect = 7.220e-68
Identity = 154/390 (39.49%), Postives = 200/390 (51.28%), Query Frame = 2
Query:  689 AGEWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDE-VDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYESCGGKTAMGDGGRERRPGEVVDGDDRADKDTKQTRLGGVFDKEERMLVIEVGRDRNPV 1855
            AGEW      LA+ LG +          RI+H YLPVY+W                A     R A     LV+GI+APQGCGKTT+V +++ + +  G  +  VSIDDFYLT A+Q+ALAA  P N LLQ+RGNAGTHDLAL   TI+ L                 ++P +TA                  VPRY+KSA GG+GDRA    W VV+   D+V  EGWM GF  +PD S+L   AG +       L VVN  L+ YR   DE VD+WLV++  +P+ VF+WR +AE RM+  G+ GMS EQ+ DF SR++PAY AYLPGLY                                    +G    +  R L+IEV ++R+PV
Sbjct:  120 AGEWERLGRQLALQLGFEHDAMDAVQKLRIYHYYLPVYWWAA--------------AQLEAHRAAGQKTALVLGISAPQGCGKTTIVEQLELLFNWLGRPAASVSIDDFYLTHADQNALAAANPGNRLLQLRGNAGTHDLALGTETIKTLRNL--------------TSPGATAA-----------------VPRYNKSAFGGRGDRAEPSSWPVVSGPLDVVFFEGWMSGFAPVPDSSSL---AGIDP-----ALPVVNEQLRGYRAAWDELVDSWLVIRIGDPQWVFKWRLQAEERMKAGGKAGMSAEQIADFVSRFIPAYSAYLPGLYG-----------------------------------VGPTTARTGRTLIIEVDQNRSPV 421          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A1Y1INT7_KLENI (D-glycerate 3-kinase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INT7_KLENI)

HSP 1 Score: 243 bits (621), Expect = 1.270e-67
Identity = 133/334 (39.82%), Postives = 178/334 (53.29%), Query Frame = 2
Query:  683 QGAGEWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDE-VDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYE 1681
            +G   W+   V +   LG DP+   EA   RIFH YLP +FW R  L     R  +P  +S P        PLV+GI+APQGCGK+T+V E+  + +  G H   +S+DDFYLT  +Q  +A  Y  N LLQ RGNAG+HD+    ++I  L                                   E G+  +VPRYDKSA  G+GDRA    W  V    +++L EGWMLGF  +P +    V            L  VNAFL+ Y E  D  V AW+V++ A+P  VF+WR +AE  MR  G+ GM++EQ+ DFC+R+ PAY+AYLPGLY+
Sbjct:  130 EGLSSWVDLGVKVCTDLGFDPAALDEAQKSRIFHYYLPTFFWCRAQLEQHRQRHEAPDGASPP--------PLVIGISAPQGCGKSTIVEELTSLFEYVGSHCAGISLDDFYLTAVDQSRMAEFYEGNKLLQFRGNAGSHDMEFGRQSIETLLKL-------------------------------TERGSTAKVPRYDKSANQGRGDRADPATWPEVKGPLEVILFEGWMLGFRPVPTQQVADVD---------QQLIPVNAFLEHYAETFDTLVGAWVVIQVADPRWVFKWRLQAEHAMRAKGKTGMTDEQIEDFCARFQPAYKAYLPGLYK 415          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A835T3W2_9CHLO (PRK domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T3W2_9CHLO)

HSP 1 Score: 242 bits (617), Expect = 5.060e-67
Identity = 155/390 (39.74%), Postives = 199/390 (51.03%), Query Frame = 2
Query:  689 AGEWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDE-VDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYESCGGKTAMGDGGRERRPGEVVDGDDRADKDTKQTRLGGVFDKEERMLVIEVGRDRNPV 1855
            AGEW      LA  L  +          RI+H YLPVY+W                A     R A     LV+GI+APQGCGKTT+V +++++ +  G  +  VSIDDFYLT A+Q+ALAA +P N LLQ+RGNAGTHDLAL   TI+ L                 +AP +TA                  VPRY+KS  GG+GDRA    W VV    D+V  EGWM GF  LPD S   ++A +        L VVN  L+ YR   DE VD+WLV++  +P+ VF+WR +AE RM+  G+ GMS EQ+ DF SR++PAY AYLPGLY S G  TA                                  +  R L+IEV ++R+PV
Sbjct:  131 AGEWERLGRQLAAQLDFEHDAMDAVQKLRIYHYYLPVYWWAA--------------AQLEAHRAAGHKTALVLGISAPQGCGKTTIVEQLEQLFNWLGRPAASVSIDDFYLTHADQNALAAAHPGNRLLQLRGNAGTHDLALGTETIKTLRNL--------------TAPGATAA-----------------VPRYNKSTFGGRGDRAEPASWPVVCGPLDVVFFEGWMSGFAPLPDSSAAQLAAIDP------ALPVVNEQLRGYRAAWDELVDSWLVIRIGDPQWVFKWRLQAEERMKAGGKAGMSAEQIADFVSRFIPAYAAYLPGLYGS-GPTTA----------------------------------RHGRTLIIEVDQNRSPV 434          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A2V0NMP5_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NMP5_9CHLO)

HSP 1 Score: 239 bits (610), Expect = 2.250e-66
Identity = 144/328 (43.90%), Postives = 181/328 (55.18%), Query Frame = 2
Query:  698 WLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDE-VDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLY 1678
            W      +A  LG D     +    R++H YLPVYFW+     MR  +     A S+P        PLV+GI+APQGCGK+TLV +++++    G  +  VSIDDFYLT A+Q ALAA  P N LLQ+RGNAG+HDL L  RT+ AL G                    TA             G    VPRYDKSA GG GDRA +  W VV    D+VL EGWMLGF  +P  +   V            L  VN  L  Y+E  D  VD+WLV++  +P+ VF WR +AE+RMR AG+ GMS+EQ+ DF SRY+PAY+AYLP LY
Sbjct:  106 WERLGRRMAQQLGFDHDGMDDTQRLRVYHYYLPVYFWVD--AQMRQHKQRHAGAGSAP--------PLVLGISAPQGCGKSTLVEQLEQLFSWLGVRAASVSIDDFYLTRADQAALAAAEPGNRLLQLRGNAGSHDLGLGERTLGALRGL-------------------TAA------------GRTAAVPRYDKSAFGGLGDRADEATWPVVEGPLDVVLFEGWMLGFAPVPPAAAAAVEP---------ALTKVNDALAAYKEAWDSAVDSWLVIRIGDPQWVFGWRLQAEQRMRAAGKAGMSDEQIADFVSRYIPAYQAYLPALY 383          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A836BXI3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BXI3_9CHLO)

HSP 1 Score: 237 bits (604), Expect = 3.100e-66
Identity = 154/393 (39.19%), Postives = 196/393 (49.87%), Query Frame = 2
Query:  680 QQGAGEWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDE-VDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYESCGGKTAMGDGGRERRPGEVVDGDDRADKDTKQTRLGGVFDKEERMLVIEVGRDRNPV 1855
            ++ A EW      LA+ L  D          RIFH YLPVYFW+   L     R G   A             LV+GI+APQGCGKTT+V +++ + +  G  +  VSIDDFYLT A+Q ALA   P N LLQ+RGNAGTHDLAL   TI+ L G                                ++ G    VPRYDKSA GG GDRAP   W VV    ++V  EGWM GF  LPD +    +A  +       L +VN  L  YRE  D  VD+WLV++  +P+ VF+WR +AE RM+  G+ GMS EQ+ DF SR++PAY A+LP LY + G  TA         PG                          R L+IEV ++R+PV
Sbjct:   46 RENAAEWERLGRQLAVQLEFDYEHLDRIQRLRIFHYYLPVYFWVDGQLRAHRERGGGKTA-------------LVLGISAPQGCGKTTIVEQLEALCNWLGVAAASVSIDDFYLTRADQAALAEANPGNRLLQLRGNAGTHDLALGSATIQELRGL-------------------------------RQAGATAAVPRYDKSAFGGLGDRAPQSAWPVVKGPLEVVFFEGWMSGFAPLPDPA---AAAAVDPS-----LALVNEMLGAYREAWDALVDSWLVIRIGDPQWVFKWRLQAEERMKAGGKAGMSAEQIADFVSRFIPAYAAFLPRLY-AAGPTTAQ--------PG--------------------------RTLIIEVDQNRSPV 351          
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Match: A0A0G4FG08_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FG08_VITBC)

HSP 1 Score: 239 bits (610), Expect = 3.300e-66
Identity = 138/342 (40.35%), Postives = 189/342 (55.26%), Query Frame = 2
Query:  695 EWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVYFWLRHLLSMRNGRPG----SPPASSSPSRG--AAADLP------LVVGINAPQGCGKTTLVSEMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTHDLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEGTVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDESNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDEVDAWLVLKTAEPEAVFEWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYES 1684
            +W+     L+  LG + S  + A   RIFH YLPVYFW+      +    G    + PA+ +PS G    A  P      L+VG +APQGCGKTTLV+ ++ + ++ G    VVSIDDFYLTG EQ+ LA  YP N LL+ RGNAG+HDL L   T+  L                                   ++GT + VPRYDKS R G+GDRAP  +W  V    D+VL EGWM GF  L D+   L       DG  N L +VN  L+ Y +  + +DAW+ ++  +P+ V++WR E E+ M+ +G+PGM+++QV DF  R+MPAYRAYLP +Y +
Sbjct:   89 QWMDRGKLLSDDLGYEWSALSTAQAARIFHYYLPVYFWIHSFCKRKREAGGLQMTAAPAAPAPSGGDVGTAGRPMKGEGALLVGFSAPQGCGKTTLVTFLKTLFEQEGLTCTVVSIDDFYLTGEEQEQLARAYPDNPLLRYRGNAGSHDLPLGRDTLMRLQSA--------------------------------KKGTSVAVPRYDKSLREGRGDRAPQGQWPTVEGPVDVVLCEGWMFGFPPLSDDDPAL-------DGDPN-LQLVNRLLRGYEQWDELMDAWIAIQIGDPKWVYDWRLEQEQAMKSSGKPGMTDQQVGDFVDRFMPAYRAYLPHVYSN 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1416.3279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1H5_9PHAE1.260e-15449.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG59_ECTSI2.740e-14359.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4I9K3_9ALVE3.900e-6945.26Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0L905_9EUKA1.780e-6842.90Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A2K3D6U6_CHLRE7.220e-6839.49Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
A0A1Y1INT7_KLENI1.270e-6739.82D-glycerate 3-kinase n=1 Tax=Klebsormidium nitens ... [more]
A0A835T3W2_9CHLO5.060e-6739.74PRK domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A2V0NMP5_9CHLO2.250e-6643.90Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A836BXI3_9CHLO3.100e-6639.19Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A0G4FG08_VITBC3.300e-6640.35Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1416contigH-canaliculatus_F_contig1416:19583..26417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.4
Seed ortholog evalue5.4e-123
Seed eggNOG ortholog2880.D8LG59
Preferred nameGLYK
KEGG rclassRC00002,RC00017,RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303
KEGG koko:K01533,ko:K01760,ko:K15918
KEGG TC3.A.3.5
KEGG ReactionR00086,R00782,R01286,R01514,R02408,R04941
KEGG Pathwayko00260,ko00270,ko00450,ko00561,ko00630,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map00450,map00561,map00630,map01100,map01110,map01130,map01200,map01230
KEGG ModuleM00017,M00532
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004849,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042455,GO:0043094,GO:0043097,GO:0043167,GO:0043168,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
EggNOG free text desc.uridine kinase activity
EggNOG OGsCOG4240@1,KOG2878@2759
EC2.7.1.31,3.6.3.4,4.4.1.8
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Exons4
Model size3125
Cds size1809
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1416.3279.1prot_H-canaliculatus_F_contig1416.3279.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1416 20847..26365 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.9340267-UTR-H-canaliculatus_F_contig1416:19582..208461622929165.9340267-UTR-H-canaliculatus_F_contig1416:19582..20846Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1416 19583..20846 -
1696845702.3649201-UTR-H-canaliculatus_F_contig1416:19582..208461696845702.3649201-UTR-H-canaliculatus_F_contig1416:19582..20846Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1416 19583..20846 -
1622929166.016542-UTR-H-canaliculatus_F_contig1416:26365..264171622929166.016542-UTR-H-canaliculatus_F_contig1416:26365..26417Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1416 26366..26417 -
1696845702.4255786-UTR-H-canaliculatus_F_contig1416:26365..264171696845702.4255786-UTR-H-canaliculatus_F_contig1416:26365..26417Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1416 26366..26417 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.9573567-CDS-H-canaliculatus_F_contig1416:20846..211791622929165.9573567-CDS-H-canaliculatus_F_contig1416:20846..21179Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 20847..21179 -
1696845702.3772306-CDS-H-canaliculatus_F_contig1416:20846..211791696845702.3772306-CDS-H-canaliculatus_F_contig1416:20846..21179Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 20847..21179 -
1622929165.97507-CDS-H-canaliculatus_F_contig1416:21496..215791622929165.97507-CDS-H-canaliculatus_F_contig1416:21496..21579Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 21497..21579 -
1696845702.3866255-CDS-H-canaliculatus_F_contig1416:21496..215791696845702.3866255-CDS-H-canaliculatus_F_contig1416:21496..21579Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 21497..21579 -
1622929165.99173-CDS-H-canaliculatus_F_contig1416:24641..250501622929165.99173-CDS-H-canaliculatus_F_contig1416:24641..25050Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 24642..25050 -
1696845702.398769-CDS-H-canaliculatus_F_contig1416:24641..250501696845702.398769-CDS-H-canaliculatus_F_contig1416:24641..25050Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 24642..25050 -
1622929166.0047174-CDS-H-canaliculatus_F_contig1416:25381..263651622929166.0047174-CDS-H-canaliculatus_F_contig1416:25381..26365Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 25382..26365 -
1696845702.4083006-CDS-H-canaliculatus_F_contig1416:25381..263651696845702.4083006-CDS-H-canaliculatus_F_contig1416:25381..26365Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1416 25382..26365 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1416.3279.1

>prot_H-canaliculatus_F_contig1416.3279.1 ID=prot_H-canaliculatus_F_contig1416.3279.1|Name=mRNA_H-canaliculatus_F_contig1416.3279.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=603bp
MARASFRGSFVGWVCVILIKRHLLLFRRPVAATLPSAGAASTRPVRNMIA
RRTLLLLDAPAALDTKGLLPLPSKWAGHAASRCHLRRKGVQSSPSSVRCC
SSSPPGTPAHDVSVSSGGKSSSTSPKWKLYDHKKHPPVPLSLEEYVALGP
RYRPQPPRRQERYTALREPTTATMNSEPIDGRDGDCSRSRSSGGRSEERR
QQQSRHEEGQQGAGEWLSASVDLAISLGIDPSTSTEAHHRRIFHLYLPVY
FWLRHLLSMRNGRPGSPPASSSPSRGAAADLPLVVGINAPQGCGKTTLVS
EMQRMLDKAGYHSVVVSIDDFYLTGAEQDALAARYPANSLLQVRGNAGTH
DLALALRTIRALAGRGNSGGCSAESGGDPSAPASTAQAVDAEGDGRQEEG
TVIRVPRYDKSARGGKGDRAPDDEWGVVTERPDIVLLEGWMLGFEALPDE
SNLLVSAGEEKDGGYNGLGVVNAFLKDYRELHDEVDAWLVLKTAEPEAVF
EWRAEAERRMRMAGRPGMSEEQVRDFCSRYMPAYRAYLPGLYESCGGKTA
MGDGGRERRPGEVVDGDDRADKDTKQTRLGGVFDKEERMLVIEVGRDRNP
VL*
back to top

mRNA from alignment at H-canaliculatus_F_contig1416:19583..26417-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1416.3279.1 ID=mRNA_H-canaliculatus_F_contig1416.3279.1|Name=mRNA_H-canaliculatus_F_contig1416.3279.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6835bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1416:19583..26417- (Hapterophycus canaliculatus Oshoro5f female)
GTGCGAGCACGAAGGAGCTCTGCGTGCTCTTTCTTCTCACGAAGCCGTCT GCATGGCACGAGCATCTTTTCGAGGAAGTTTCGTGGGGTGGGTTTGTGTC ATACTCATCAAAAGGCACCTACTCCTGTTTCGCCGACCTGTCGCTGCAAC ATTGCCGTCGGCCGGGGCCGCTTCAACTCGTCCAGTGAGGAACATGATCG CGAGAAGAACTTTGCTGCTGTTGGACGCACCAGCAGCACTCGACACGAAA GGTCTACTACCGTTACCATCGAAGTGGGCAGGGCACGCCGCTTCCCGTTG CCACCTCCGACGAAAAGGCGTGCAGTCGTCTCCTTCATCTGTCCGCTGCT GCTCCTCATCACCTCCTGGAACACCTGCTCATGATGTTTCGGTCAGCTCG GGTGGGAAGTCTTCATCGACCTCACCGAAATGGAAACTTTACGACCACAA GAAGCACCCTCCTGTGCCCTTGTCTTTAGAAGAGTACGTTGCTCTCGGCC CTCGGTATCGGCCACAACCACCCCGGCGCCAAGAGCGATACACGGCCCTG CGAGAGCCGACAACAGCAACGATGAATTCAGAACCAATCGACGGCAGAGA CGGCGACTGCAGCCGCAGCCGCAGCAGCGGCGGCAGATCAGAGGAACGTC GGCAGCAGCAGAGCCGCCATGAGGAGGGGCAGCAGGGAGCAGGGGAGTGG TTGTCCGCCTCGGTCGACCTTGCGATCTCCCTCGGCATCGACCCTTCGAC GTCGACCGAAGCGCATCATCGCCGAATCTTTCATCTCTATCTCCCCGTGT ACTTCTGGCTGAGGCACCTCCTGTCCATGCGGAACGGGCGCCCCGGCTCG CCTCCCGCTTCGTCGTCACCCTCCCGTGGTGCTGCTGCCGACCTGCCGCT GGTTGTGGGCATCAACGCGCCTCAGGGGTGTGGAAAAACCACCCTCGTCT CGGAGATGCAGCGCATGCTGGACAAGGCCGGATACCACTCCGTCGTGGTT TCGATAGACGACTTCTACCTCACAGGAGCGGAGCAGGTGGGCTTATTCTG CCGCTGCTGCTTGTCCTGCACACTTGTACTCGATGGAGGCGGGGGGAGCG AAACAGGTGGTGCAGCGAATGGGGAAGAGTGGAGCTAACAGCGCTTTCCT TCACTTTCAGTGCTTTGCTTTAAGTCCGAGGCCAAAACAAAGTCCGGAAT GTACTACGAAAGGTGCTTCGACAGAGGCCGGGTGTGAAAAAGAAGCTCGG CACCTTGGAGTCACGGATGTTTCTGCTCCCCCCCACCCCGACACGCCGCG TTCCTCTCCATGCGAGCGCCCCTCTCCGTTCAACTGCTGCTGCTCGCGGT CGTCGTTGGTTGATCAGGATGCTCTCGCAGCGAGATACCCTGCAAACTCC TTGCTGCAAGTTCGGGGCAACGCAGGAACGCATGACCTGGCCCTGGCTCT CCGCACCATTCGCGCTTTAGCAGGACGCGGAAACAGTGGTGGTTGCAGCG CAGAGAGTGGAGGAGACCCGTCGGCCCCAGCCTCGACAGCCCAGGCGGTA GACGCGGAGGGGGACGGGCGACAGGAAGAGGGTACTGTCATCCGTGTCCC TCGATACGATAAGTCTGCGAGAGGGGGCAAGGGGGATCGAGCGCCGGATG ACGAATGGGGTGTGGTTACGGAGCGGCCGGACATCGTGCTTTTGGAAGGG TGGATGCTCGGCTTCGAGGCCTTGCCAGACGAGAGCAACCTGCTCGTTTC AGCAGGGGAAGAGAAGGACGGTGGGTGTTATATTATAGAAGCTCGATGTC GATGCCGCACGGTATGGACTGGGCCGATCGAGACAGTTGCGTTGGTTTGT CGAGCCATAATCTCAAAGGAAGTCAGGACCAAAACAAGTTCGTCAAATCC CGTTCGCACGATGACACGAGTTTTTTTTTTTTTTCTGGTGGACTGTTTGG GCGTGTTCTCTTGAACGGGTTTCATCTCACGCATTCCATGTGGATCAAGG TCGAAAACTTTGAAGCGTTATCTTCCGAGGCAAAGAAAACTCCTGCTGTG CTTTCTTTGCAACAGCAGTGCTTTATTTTTAGTGAAGTTCTATCATAGCG TATCGCGACTTCATCATGAATAACCAGGGAAGTCGGTTACGGCGGTACAT GTAATTGCGCGTAACGTATTCGAGCCGTACGTTACTCATAATCGCGGCGT CATTCGACGTAACTCGAAGAGGCACCGCAGATTGGATTGTACGGACGCTT TTCAATTTACAATAAGAGCACCGTCAAGCTATCTCCAGCCCAACATTTTC CCTTCACGCCTGTGCAGGATCGCGTAAACATCCTTGGCTTTTTTTTTTTT TTTTGCGCCTGCGCCGGCCCCCGCAAACCTCCTTGGCTTTTTTTTTTTTT TTGTCGACAAACAAGCCTTACCCCGACGAAGGGGCCTCTTCCATGCAGAG TACAAAATGCAACGCGCAAACGAACGTGCAAACTACAGATCAAAGATTAT ACCGAAATTGTGCGCGGGGTCTTCTGCATTTAAGTTTTTGGTTGTCGAAG CATCAAGCACCAAACACCAGGGATGAATTATTTGAGCAATTTCGCGCAGG TCCGGAGCTCTCTTGATCCGTATTTGAGCTGTTGAAACGAATTTTATTAT CAGTGCTAGAGGATGGAAACCCGGGGACGAAATAAGTTCATCCCCCGACG TTGTTTGCCGTAACTCGCGTAACTAGGTCGAAATGCCGACTACACGTAAT TACGTGTCCGTACTTTTTTCGTTTTGCCGTAACCGACTTCCCTGTGAATA ACATCTCACTTTATGTTGGCAGGGTCAGTGCATTTCCCACCGGCCTCCCC TTTTCGCACCTGTTTCCGGTCTGCGGACAGCCTTCTTTACACATACGGGT GCATTTCCCCCCTGCTGCTGCACGAATTCCCTGAGGTCAAAATGCACATC TCGGTTTCCTGCGCGTTATTTCGATCCTTCACTGGAAACTTAGACACTGC TGTGATTGCTACAGGCAGGCCGCCCACAACTCCACCATGAGTTCCGTGGT CCTTTCGCCAACATGCTGTTTCAATTGTCCCCATCTCTTCTCCTATTCGG CAACCCCACGCAAAAAGTTAAGCGGCGTCGGGCCAGGCTAGTACTACGGT AGGGGACCACGTGGGAAGCCCTGGTGCTGTTCCTTTTTGCATGCTAGCGA GTCCAAAGGCGGGGTATTCGATAAGAAGCTTGTCCTCGTACGAAATATCC ACCAAAATGTCAGGTTCTAAATTTCCAGGGTGGTGTTCGGTAATTCTTCC GTCGATGTTTTACCGCCGTACACGACGGTCCCGGTATTCCGTCGATTTAC CGGCAAATTGTCGTGTTACCGTCTACCGGCAAGGGCGGTACCGCCGAAAA ATGAAATACCGTCCACCGCCAGGAAAACTACCGTCGTACCACCTACCGTC GAATTAGTCTACCGTTAGATTCACGATATAACCGTCTAGCGGTCCATGAA TACCGTCAGGTTCACCATCACCGTCTACCGGCAAAATAAATACCGGCAAC CGTTAGATACCTCCAGCAGAGGATCGATAGATTCGCTATTACCGTCTACC GCCATCATAAATACCGGCAACCACTAGATGCCGTCAGAAAAGTACCGGCA GATTCGCTGTTACCGTCTACCGCCATCATAAATACCGGCAACCGTTGGAT ACCGTCAGAAAAGTACCGGCAGATTCGCTGTTACCGTCTACGGGCAACTC TAGACATCGCCAGAACAGAATACCGCCCAAAGGGCACCGTCAGTACTGGG TACCTCGCAAATGATGGCAGATAATCTTTTTTCTTCATGCGCTTCCTTCT TTTCTGATCAAAAGGTTCCACTGGTTCCCGTTCGGGAGAACCTATGCGTG TGGACGTGTGACGTGTTAACAGACGGCGCCCACGCATCTGCCACCACGCC CACGCACCTGCCCACCTCACGCTCAGCGTGGTCCAGCAAAAGTATCAGCG GTGCGAGCAGTGGCAGTAGTGTTGCGTGTGAGGCTCCTGCTTCTTCAACT GCAGAGGCTGAGACTGCTGCTTCGCTAGCCACTTGCTCGGGGTCGGTAGG GAATGATGCGGTTGACGTGGCGCTGCAACCACCGCAAACCGCAGAAACCA CCCATCCACAACCGTCAACTCGAATATACCCAGGTCCAAGTACATCGGTA ACCGTCATACAAGGGTATACCGTCTACCGTCAGCAAAATTACCGTCGTGT CCTATTACCGCCGGACAATTAACCGGCACGTTTTTTAGTTGTCCGTTTCC GTCAGGGCAGTAACCGTCATAAAAAATAATATACCGTCTACCGTCAGCAA AATTACCTTCGTGTCCTACTACCGCTGGACAATTAACCGCACACTTTCGA GTTTTCCGTTTCCGTCAGGGCAGTAACCGTAAAAAAATAACATACCGTCT ACCGTCACGAAAATTACCGTCATGTCCTACAACCGCTGAACAATTAACTC GCACATTTTGTAGTTTCCGTTCCCGTCTGATTGGCTTCCGTCAAAATCAC AAAATACCGTCTACCGTCAGCGAAACTACCGGCAAACGGTAAACCGTCCC GTCCGAGTTCCGTCAAAAATACCGTTACCGAACACCACCCTGGAAATTTC CAACGGTGGGGGAGTCGCATCAGCCAGTGTGTGGGTTGTACTCGGCCTAG CTTGTATGACGTTTTTTTGTACGCAGCAATGCCATAGCGCTTATTTTCGT GCTCTCTTCTCGCCTTTCGCCACCAAGCGTGTCCGTCATCATGAGCGTCC TCGTGCCTTCCCGCTCTCTCACCCCCCAACAGGTAAAGACAATGGCCTTG GAGTAGTCAACGCCTTCCTCAAGGACTACCGAGAACTACACGACGAGGTC GATGCCTGGCTGGTGCTGAAGGTACTTCAGTAGCTCCTTTCCGGACATAC CCTGACATCCTCCGCACCCAGGCATCCTCCCACACTGCAAAGTGCAATGA GCAGTTAGTGAGGGTCGAGGTATCTGAGACCCGCTTTTGTTGTTGAGGTC TACTCTCATCGGACGATTGCCCCTCCCGTTGCCCCGGCCTCGCAACGCGT CCCGTGATGTATCATGTCTACTTCTGGAAGTACCGGCGTACTGCTGCATA TCTCCATCGAAAGTAGTTCGAAAAACTTAGACTAAGCTGCCCAGATATCT GCTTGTGTACCTGACCTGGAATGATCGCCAATGAACAGACTGCCGAGCCT GAAGCGGTGTTCGAATGGCGAGCCGAAGCCGAGCGGCGCATGCGAATGGC GGGTCGCCCAGGGATGTCTGAGGAACAGGTTCGAGATTTCTGCTCCAGAT ACATGCCCGCCTACCGCGCCTATCTACCGGGGTTGTACGAAAGTTGCGGG GGGAAGACTGCGATGGGTGATGGTGGACGTGAGAGACGTCCCGGTGAAGT TGTTGACGGGGATGATCGTGCAGATAAGGATACAAAACAAACAAGATTGG GAGGCGTTTTCGATAAGGAGGAACGAATGCTGGTGATAGAGGTCGGTAGA GACAGGAATCCTGTCCTTTGATGAGGTCGATGGGCATGTGCGAAGAATCA TGAGCTTGAAAGCTCGCGCATGAGGTGTCGTGCGGCAGGCATGATGTGCC GTGGGAGCTCACATCATGGACCGTACATGGTGTACATGGTGTGTTTCTGT TCATGAGGTCGTCGGGATACGTGTTCCCGTAGCTGTGTGCAGTTGTGCAA GGTTCGTTTTGGCCTGGAACAGTGTCTTCCGTCGTCCCTATCGATGACTC CAAAAAATGGCATGCGCGATTGGGTGGGGCTGTGGAATGGAGCTCACGCA TCCACTGAATCGGCCGAACATAGCGGGAATCGGAATCGGCCGATCGAGGG TATATCTCATCGATGTTTTGGCAACTGTGGCCGGTATTTAAACCAAGGAC TTCTTCAGAGGCGGCATCAGAAGAGTAACTGGATTGTCGACCTGCAAAAA CGACCCTCGCCAGTATTGGAGAAGGCCGTTCACGTATTGCCTCTCAAGCA CAGGGTCGTCAGGGAGCGAGGAATGAGAATTTTCGCGTTTTGTCAACGTG CCCACTTTTATGCACGCCGCGGACTGCCGGAACACACCACACATCATGAG CGCGATATCCAAAGCCACAAAATCACCTCGCAATCCTTGCGGGCGACATC GCGGAGGTGGTAGTGGTCCGGCGACATGGGCGGCCGCGGCTTGGAACTTG AAAACAAATCAACCATCGTACGGAGTTGGTATTCCTGCTTTTTTGCGGTC ACACCCCGTGATCGTCTTTGGTAACGACCTAAGCGTCTGGTATTTGGAGT CGTCTTTGGCGGCTGAAAAACAAAACCGTCGACTTCGTAGGTTACACAGC GCGTCACGTCATTTTGTTTTCGCTTGTTTTCCAATGGAATTGGTATGAAT TACCACCTCTCAACCTTGGAAAGACATGGCTTACTCATGGACTATTAAGG GGGGCCCATTCGCAGGACGCCACTTTTTGGGAGTCCGGTGGCGACTCGAG CAGGAAAAGCCCTCTTCAACCTGGAAGAACTGATTTAGTTTCACGAAGTG AGAGATAGAGGCTCCGGCTCGACACGCCCGCTTGACCAAGTCTCGATCCA ACGGGTACAAGCCGGTATGCCTGTTGCGCCGACTGTCGACGTTTTTACAC GAGTCCAAGATGCGCCTGATCCACAGCCCCGACGACTGGCAGTGCTTCCT CGGGAGGGGGGGGCTTTGACCGGGACCGCCATCTACAGCTCTGGGAAGGT GTTGGACGCACGGGTATGCATACCCTGAAAACAAC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1416:19583..26417-

>mRNA_H-canaliculatus_F_contig1416.3279.1 ID=mRNA_H-canaliculatus_F_contig1416.3279.1|Name=mRNA_H-canaliculatus_F_contig1416.3279.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1416:19583..26417- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCACGAGCATCTTTTCGAGGAAGTTTCGTGGGGTGGGTTTGTGTCAT
ACTCATCAAAAGGCACCTACTCCTGTTTCGCCGACCTGTCGCTGCAACAT
TGCCGTCGGCCGGGGCCGCTTCAACTCGTCCAGTGAGGAACATGATCGCG
AGAAGAACTTTGCTGCTGTTGGACGCACCAGCAGCACTCGACACGAAAGG
TCTACTACCGTTACCATCGAAGTGGGCAGGGCACGCCGCTTCCCGTTGCC
ACCTCCGACGAAAAGGCGTGCAGTCGTCTCCTTCATCTGTCCGCTGCTGC
TCCTCATCACCTCCTGGAACACCTGCTCATGATGTTTCGGTCAGCTCGGG
TGGGAAGTCTTCATCGACCTCACCGAAATGGAAACTTTACGACCACAAGA
AGCACCCTCCTGTGCCCTTGTCTTTAGAAGAGTACGTTGCTCTCGGCCCT
CGGTATCGGCCACAACCACCCCGGCGCCAAGAGCGATACACGGCCCTGCG
AGAGCCGACAACAGCAACGATGAATTCAGAACCAATCGACGGCAGAGACG
GCGACTGCAGCCGCAGCCGCAGCAGCGGCGGCAGATCAGAGGAACGTCGG
CAGCAGCAGAGCCGCCATGAGGAGGGGCAGCAGGGAGCAGGGGAGTGGTT
GTCCGCCTCGGTCGACCTTGCGATCTCCCTCGGCATCGACCCTTCGACGT
CGACCGAAGCGCATCATCGCCGAATCTTTCATCTCTATCTCCCCGTGTAC
TTCTGGCTGAGGCACCTCCTGTCCATGCGGAACGGGCGCCCCGGCTCGCC
TCCCGCTTCGTCGTCACCCTCCCGTGGTGCTGCTGCCGACCTGCCGCTGG
TTGTGGGCATCAACGCGCCTCAGGGGTGTGGAAAAACCACCCTCGTCTCG
GAGATGCAGCGCATGCTGGACAAGGCCGGATACCACTCCGTCGTGGTTTC
GATAGACGACTTCTACCTCACAGGAGCGGAGCAGATGGCACGAGCATCTT
TTCGAGGAAGTTTCGTGGGGTGGGTTTGTGTCATACTCATCAAAAGGCAC
CTACTCCTGTTTCGCCGACCTGTCGCTGCAACATTGCCGTCGGCCGGGGC
CGCTTCAACTCGTCCAGTGAGGAACATGATCGCGAGAAGAACTTTGCTGC
TGTTGGACGCACCAGCAGCACTCGACACGAAAGGTCTACTACCGTTACCA
TCGAAGTGGGCAGGGCACGCCGCTTCCCGTTGCCACCTCCGACGAAAAGG
CGTGCAGTCGTCTCCTTCATCTGTCCGCTGCTGCTCCTCATCACCTCCTG
GAACACCTGCTCATGATGTTTCGGTCAGCTCGGGTGGGAAGTCTTCATCG
ACCTCACCGAAATGGAAACTTTACGACCACAAGAAGCACCCTCCTGTGCC
CTTGTCTTTAGAAGAGTACGTTGCTCTCGGCCCTCGGTATCGGCCACAAC
CACCCCGGCGCCAAGAGCGATACACGGCCCTGCGAGAGCCGACAACAGCA
ACGATGAATTCAGAACCAATCGACGGCAGAGACGGCGACTGCAGCCGCAG
CCGCAGCAGCGGCGGCAGATCAGAGGAACGTCGGCAGCAGCAGAGCCGCC
ATGAGGAGGGGCAGCAGGGAGCAGGGGAGTGGTTGTCCGCCTCGGTCGAC
CTTGCGATCTCCCTCGGCATCGACCCTTCGACGTCGACCGAAGCGCATCA
TCGCCGAATCTTTCATCTCTATCTCCCCGTGTACTTCTGGCTGAGGCACC
TCCTGTCCATGCGGAACGGGCGCCCCGGCTCGCCTCCCGCTTCGTCGTCA
CCCTCCCGTGGTGCTGCTGCCGACCTGCCGCTGGTTGTGGGCATCAACGC
GCCTCAGGGGTGTGGAAAAACCACCCTCGTCTCGGAGATGCAGCGCATGC
TGGACAAGGCCGGATACCACTCCGTCGTGGTTTCGATAGACGACTTCTAC
CTCACAGGAGCGGAGCAGGATGCTCTCGCAGCGAGATACCCTGCAAACTC
CTTGCTGCAAGTTCGGGGCAACGCAGGAACGCATGACCTGGCCCTGGCTC
TCCGCACCATTCGCGCTTTAGCAGGACGCGGAAACAGTGGTGGTTGCAGC
GCAGAGAGTGGAGGAGACCCGTCGGCCCCAGCCTCGACAGCCCAGGCGGT
AGACGCGGAGGGGGACGGGCGACAGGAAGAGGGTACTGTCATCCGTGTCC
CTCGATACGATAAGTCTGCGAGAGGGGGCAAGGGGGATCGAGCGCCGGAT
GACGAATGGGGTGTGGTTACGGAGCGGCCGGACATCGTGCTTTTGGAAGG
GTGGATGCTCGGCTTCGAGGCCTTGCCAGACGAGAGCAACCTGCTCGTTT
CAGCAGGGGAAGAGAAGGACGGTGGGTGATGCTCTCGCAGCGAGATACCC
TGCAAACTCCTTGCTGCAAGTTCGGGGCAACGCAGGAACGCATGACCTGG
CCCTGGCTCTCCGCACCATTCGCGCTTTAGCAGGACGCGGAAACAGTGGT
GGTTGCAGCGCAGAGAGTGGAGGAGACCCGTCGGCCCCAGCCTCGACAGC
CCAGGCGGTAGACGCGGAGGGGGACGGGCGACAGGAAGAGGGTACTGTCA
TCCGTGTCCCTCGATACGATAAGTCTGCGAGAGGGGGCAAGGGGGATCGA
GCGCCGGATGACGAATGGGGTGTGGTTACGGAGCGGCCGGACATCGTGCT
TTTGGAAGGGTGGATGCTCGGCTTCGAGGCCTTGCCAGACGAGAGCAACC
TGCTCGTTTCAGCAGGGGAAGAGAAGGACGGTGGGTACAATGGCCTTGGA
GTAGTCAACGCCTTCCTCAAGGACTACCGAGAACTACACGACGAGGTCGA
TGCCTGGCTGGTGCTGAAGACAATGGCCTTGGAGTAGTCAACGCCTTCCT
CAAGGACTACCGAGAACTACACGACGAGGTCGATGCCTGGCTGGTGCTGA
AGACTGCCGAGCCTGAAGCGGTGTTCGAATGGCGAGCCGAAGCCGAGCGG
CGCATGCGAATGGCGGGTCGCCCAGGGATGTCTGAGGAACAGGTTCGAGA
TTTCTGCTCCAGATACATGCCCGCCTACCGCGCCTATCTACCGGGGTTGT
ACGAAAGTTGCGGGGGGAAGACTGCGATGGGTGATGGTGGACGTGAGAGA
CGTCCCGGTGAAGTTGTTGACGGGGATGATCGTGCAGATAAGGATACAAA
ACAAACAAGATTGGGAGGCGTTTTCGATAAGGAGGAACGAATGCTGGTGA
TAGAGGTCGGTAGAGACAGGAATCCTGTCCTTTGAACTGCCGAGCCTGAA
GCGGTGTTCGAATGGCGAGCCGAAGCCGAGCGGCGCATGCGAATGGCGGG
TCGCCCAGGGATGTCTGAGGAACAGGTTCGAGATTTCTGCTCCAGATACA
TGCCCGCCTACCGCGCCTATCTACCGGGGTTGTACGAAAGTTGCGGGGGG
AAGACTGCGATGGGTGATGGTGGACGTGAGAGACGTCCCGGTGAAGTTGT
TGACGGGGATGATCGTGCAGATAAGGATACAAAACAAACAAGATTGGGAG
GCGTTTTCGATAAGGAGGAACGAATGCTGGTGATAGAGGTCGGTAGAGAC
AGGAATCCTGTCCTTTGA
back to top