mRNA_H-canaliculatus_F_contig14159.3274.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI) HSP 1 Score: 245 bits (626), Expect = 6.230e-81 Identity = 123/128 (96.09%), Postives = 125/128 (97.66%), Query Frame = 1
Query: 1 TQGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGVI 384
+ GLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKL DGRVLAGYAGSTADALTLMERLEGKLEEH+GQLMNACVALAKDWRTDKYLRRLEAVVLVAD KFSLKVTGLGDVLAPNGGVI
Sbjct: 25 SSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAPNGGVI 152
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A7S2WBX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBX0_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.320e-54 Identity = 91/126 (72.22%), Postives = 103/126 (81.75%), Query Frame = 1
Query: 7 GLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGVI 384
G HGTTILCVRK GKVV++GDGQVSQG MVVKPNA KVR++ DG VL G+AGSTADA TL+ERLE +LEEH GQL ACV LAK WRTDKYLRRLEAV+LVADK S ++TG GDVL P G++
Sbjct: 31 GSGRHGTTILCVRKEGKVVVIGDGQVSQGSMVVKPNAKKVRRMGDG-VLVGFAGSTADAFTLLERLEERLEEHPGQLTRACVDLAKAWRTDKYLRRLEAVLLVADKDVSFELTGNGDVLEPKDGIM 155
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A2W5A674_9SPHN (HslU--HslV peptidase proteolytic subunit (Fragment) n=1 Tax=Sphingomonas sanxanigenens TaxID=397260 RepID=A0A2W5A674_9SPHN) HSP 1 Score: 176 bits (446), Expect = 3.550e-54 Identity = 86/127 (67.72%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 1 TQGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGV 381
+ L+ HGTTIL VRKNGKV+++GDGQVS G V+KPNA KVR L DG+V+AG+AG+TADA TL ERLE KLE H+GQLM A V LAKDWRTDKYLR LEA+++VADK +L +TG GDVL P GG+
Sbjct: 2 SDSLKWHGTTILSVRKNGKVIVIGDGQVSMGQTVMKPNARKVRPLGDGKVIAGFAGATADAFTLFERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEALMIVADKDVTLVLTGNGDVLEPVGGI 128
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A1L6JEK3_9SPHN (ATP-dependent protease subunit HslV n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1L6JEK3_9SPHN) HSP 1 Score: 175 bits (443), Expect = 1.680e-53 Identity = 86/127 (67.72%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 TQGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGV 381
+ + HGTTIL VR+NG+VV+ GDGQVSQG V+KPNA KVR L DG+V+AG+AG+TADA TL ERLEGKLE H GQLM A V LAKDWRTDKYLR LEA+++VADK +L +TG GDVL P GV
Sbjct: 2 SDNMTWHGTTILSVRRNGRVVIAGDGQVSQGSTVMKPNARKVRPLGDGKVIAGFAGATADAFTLFERLEGKLERHQGQLMRAAVELAKDWRTDKYLRNLEAMLIVADKDTTLIITGNGDVLEPEAGV 128
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A430G3G2_9SPHN (ATP-dependent protease subunit HslV n=1 Tax=Sphingomonas koreensis TaxID=93064 RepID=A0A430G3G2_9SPHN) HSP 1 Score: 175 bits (443), Expect = 1.680e-53 Identity = 86/127 (67.72%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 1 TQGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGV 381
+ + HGTTIL VR+NG+VV+ GDGQVSQG V+KPNA KVR L DG+V+AG+AG+TADA TL ERLEGKLE H GQLM A V LAKDWRTDKYLR LEA+++VADK +L +TG GDVL P GV
Sbjct: 2 SDNMTWHGTTILSVRRNGRVVIAGDGQVSQGSTVMKPNARKVRPLGDGKVIAGFAGATADAFTLFERLEGKLERHQGQLMRAAVELAKDWRTDKYLRNLEAMLIVADKDTTLIITGNGDVLEPEAGV 128
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A4D9D968_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D968_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.730e-53 Identity = 91/123 (73.98%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 16 MHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGVI 384
MH TTILCVRK KVVMMGDGQVSQG VVKPNA KVR+L ++AG+AGSTAD TLMERLE KLEEH GQL ACV LAK WRTDKYLRRLEA +LVADK S ++TGLGDVL P GVI
Sbjct: 1 MHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGQD-IIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVI 122
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: UPI001F315AE3 (ATP-dependent protease subunit HslV n=1 Tax=Sphingomonas sp. DM2-R-LB4 TaxID=2899123 RepID=UPI001F315AE3) HSP 1 Score: 174 bits (442), Expect = 2.450e-53 Identity = 85/121 (70.25%), Postives = 99/121 (81.82%), Query Frame = 1
Query: 19 HGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGV 381
HGTTIL VRKNG+VV++GDGQVSQG V+KPNA KVR+L DG V+ G+AG+TADA TL ERLE KLE H GQL+ A V LAKDWRTDKYLR LEA+++VADK +L +TG GDVL P GGV
Sbjct: 9 HGTTILSVRKNGRVVVIGDGQVSQGQTVMKPNAKKVRRLGDGSVIGGFAGATADAFTLFERLEAKLERHQGQLLRAAVELAKDWRTDKYLRNLEAMMIVADKAVTLVITGNGDVLEPEGGV 129
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A2N3PSX7_9PROT (ATP-dependent protease subunit HslV n=2 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A2N3PSX7_9PROT) HSP 1 Score: 174 bits (441), Expect = 3.070e-53 Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 19 HGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGVI 384
HGTTIL VRKNGKVV+ GDGQVS GD V+K NA KVR+L DG V+ G+AG+TADA TL ERLE KLE+H GQL+ ACV LAKDWRTD+YLRRLEA++ VADK SL +TG GDVL P G+I
Sbjct: 8 HGTTILAVRKNGKVVIAGDGQVSLGDTVIKSNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLEKHPGQLIRACVELAKDWRTDRYLRRLEAMMAVADKSASLVLTGTGDVLEPEDGLI 129
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: W7UCI7_9STRA (Heat shock protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCI7_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.440e-53 Identity = 92/125 (73.60%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 10 LEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGVI 384
L MH TTILCVRK KVVMMGDGQVSQG VVKPNA KVR+L + ++AG+AGSTAD TLMERLE KLEEH GQL ACV LAK WRTDKYLRRLEA +LVADK S ++TGLGDVL P GVI
Sbjct: 80 LTMHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGED-IIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVI 203
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Match: A0A2G4ISG1_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2G4ISG1_9PROT) HSP 1 Score: 173 bits (439), Expect = 6.580e-53 Identity = 85/122 (69.67%), Postives = 102/122 (83.61%), Query Frame = 1
Query: 19 HGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAGSTADALTLMERLEGKLEEHDGQLMNACVALAKDWRTDKYLRRLEAVVLVADKKFSLKVTGLGDVLAPNGGVI 384
HGTTIL VRKNG+V++ GDGQV+ G++VVK NA KVR+LADG +LAG+AG+TADA TL ERLE KLE+H QLM ACV LAKDWRTD+YLRRLEA++ VADK+ SL +TG GDVL P G+I
Sbjct: 10 HGTTILSVRKNGRVIIAGDGQVTLGNIVVKSNARKVRRLADGSILAGFAGATADAFTLFERLEAKLEKHPSQLMRACVELAKDWRTDRYLRRLEAMMAVADKEVSLILTGTGDVLEPTDGLI 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14159.3274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14159.3274.1 >prot_H-canaliculatus_F_contig14159.3274.1 ID=prot_H-canaliculatus_F_contig14159.3274.1|Name=mRNA_H-canaliculatus_F_contig14159.3274.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=123bp MHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLADGRVLAGYAback to top mRNA from alignment at H-canaliculatus_F_contig14159:61..2146+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14159.3274.1 ID=mRNA_H-canaliculatus_F_contig14159.3274.1|Name=mRNA_H-canaliculatus_F_contig14159.3274.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2086bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14159:61..2146+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14159:61..2146+ >mRNA_H-canaliculatus_F_contig14159.3274.1 ID=mRNA_H-canaliculatus_F_contig14159.3274.1|Name=mRNA_H-canaliculatus_F_contig14159.3274.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=738bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14159:61..2146+ (Hapterophycus canaliculatus Oshoro5f female)back to top |