mRNA_H-canaliculatus_F_contig14154.3273.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14154.3273.1
Unique NamemRNA_H-canaliculatus_F_contig14154.3273.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: D7FHV3_ECTSI (Phosphatidylinositol glycan anchor biosynthesis, class Q n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV3_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 6.550e-139
Identity = 203/227 (89.43%), Postives = 211/227 (92.95%), Query Frame = 1
Query:    1 QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQVRAPPPPP 681
            QP   +VEGLVGLSHWLFG+AADA+LGVVAC LLLRHT AAA AAHQALHLLHVDVL EELEWLNYFPAGFKLNVPLTHTLGSLTL+GMEAYASIVG LAQWE  AMKAIA+CAA GGLTTALAV HD+LRLL LHTAT HTAFAALHNLHSSLLGSLWQLFRG+KRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAV+VGGQVR P PPP
Sbjct:  124 QPAERRVEGLVGLSHWLFGVAADAALGVVACALLLRHTEAAARAAHQALHLLHVDVLSEELEWLNYFPAGFKLNVPLTHTLGSLTLVGMEAYASIVGQLAQWEGAAMKAIAICAAGGGLTTALAVAHDILRLLALHTATAHTAFAALHNLHSSLLGSLWQLFRGRKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVAVGGQVRPPSPPP 350          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A6H5K7D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7D0_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 8.520e-134
Identity = 197/219 (89.95%), Postives = 205/219 (93.61%), Query Frame = 1
Query:    1 QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQ 657
            QP   +VEGLVGLSHWLFG+AADASLGVVACVLLLRHT AAA AAHQALHLLHVDVL EELEWLNYFPAGFKLNVPLTHTLGSLTL+GMEAYASIVG LAQWE   MKAIA+C A GGL+TALAV HD+LRLLTLHTAT HTAFAALHNLHSSLLGSLWQLFRG+KRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAV+VGGQ
Sbjct:   46 QPAERRVEGLVGLSHWLFGVAADASLGVVACVLLLRHTEAAARAAHQALHLLHVDVLSEELEWLNYFPAGFKLNVPLTHTLGSLTLVGMEAYASIVGQLAQWEGATMKAIAICGAGGGLSTALAVAHDILRLLTLHTATAHTAFAALHNLHSSLLGSLWQLFRGRKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVAVGGQ 264          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S1CDH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDH3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.950e-40
Identity = 94/207 (45.41%), Postives = 121/207 (58.45%), Query Frame = 1
Query:   31 VGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAA---HQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAV 642
            V L + +F + AD  +G+ A V L +H G+        H     LHVDVL E++ WL   PAG KLN  L H LGS  L  ++ + ++   L   E   +  +A     G  T  LAV HD L L+T+H    ++ FA LHN   S++GSLW+LFRGKKRNVLR RVD+C YD  QLL+GTL+FTVL FL PT  VYY FF  V  +
Sbjct:   99 VRLFNSMFLVVADVGIGIAAGVFLSKHAGSRDIVLRWFHTVGRFLHVDVLHEQVVWLMGLPAGLKLNQDLDHFLGSWVLRMIDLWNTVTTVLTPLEPVIVVVVATLGVCGW-TFVLAVAHDGLELMTVHIYLLYSVFAWLHNAQLSVIGSLWRLFRGKKRNVLRHRVDSCDYDVPQLLVGTLLFTVLFFLFPTSLVYYIFFTAVHLI 304          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A6A7FTJ0_9CRUS (Gpi1p n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FTJ0_9CRUS)

HSP 1 Score: 140 bits (353), Expect = 1.110e-34
Identity = 69/167 (41.32%), Postives = 107/167 (64.07%), Query Frame = 1
Query:  136 HQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQ 636
            HQA H LH+DV+R  + WL   PAG KLN  L H  GS+ L G++ + +I   +  WE   +  I+     G  +  L++C D+L ++T+H    +T FA L+++    L SLW+LFRGKK+N+LR R+D+C +D  QL++GT++F+++ FL PTI+ Y+ FF  V+
Sbjct:  377 HQAGHFLHLDVMRANIVWLMGLPAGLKLNHNLNHCFGSMVLFGIDFWDAITSVVTVWEPAVLWLISFAGILGA-SMVLSLCSDILSVVTIHVDFVYTTFAKLYSIEIKALSSLWKLFRGKKKNILRQRIDSCQFDVDQLMVGTILFSLIFFLLPTIATYFLFFSYVR 542          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A835ZDM7_9STRA (N-acetylglucosaminyl transferase component-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.520e-32
Identity = 74/197 (37.56%), Postives = 113/197 (57.36%), Query Frame = 1
Query:   67 DASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQ 657
            D SLG      +  H  +      +    +    L  ++ WLN+ P GFKLN+P   TLG  T++ ++ Y +I+          + A+ + +A GG++TA A   D+  +LTLH    H + + L+  + + + SLW LFRGKKRNVLR R+D+C +D  QL+LGTL+FTVL FL PT++V+Y FF +++   V  Q
Sbjct:  299 DLSLGCALAAGVYCHQASLVSCLSRCSRFVQEAPLLRQITWLNHHPGGFKLNLPAATTLGQATIMIVQVYCAIIRMALAHVQWLVLALCLSSAFGGISTASAAVFDLFWVLTLHVTLIHRSLSVLYRGNLTAVISLWHLFRGKKRNVLRHRIDSCSFDHAQLMLGTLMFTVLLFLLPTVAVHYLFFSLLKMAQVAVQ 495          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A0H5R8I3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R8I3_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 2.860e-31
Identity = 77/212 (36.32%), Postives = 120/212 (56.60%), Query Frame = 1
Query:    1 QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQ 636
            +P+ +    ++     +     D   G+   + L  ++       H    +LHVDVLR ++ WL   PAG KLN  L   LG + L G++ + +I   L   E   +  +++ A  G  + A+A   D+L ++T H    HTAF+ L++L  S L +L +LF GKKRNVL+ RVD+C +D  QLLLGT++FT++ FL PT+++YY FF IV+
Sbjct:  308 KPKSYVNASMISFGSSVCQFLVDVITGIALGIFLRTYSTFILEIIHDGGRILHVDVLRRQVIWLMGLPAGMKLNFALDQALGLMVLYGIDFWNAITTVLTPLEHLIIVGVSIMAVFGT-SIAVACAIDLLSMMTTHILFIHTAFSRLYSLALSALSALSKLFSGKKRNVLQRRVDSCHFDVDQLLLGTILFTLIFFLFPTVAIYYLFFAIVR 518          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S4K6Y8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6Y8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.780e-31
Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 1
Query:  151 LLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAY----ASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQVRA 666
            LLH  +LR+ + WL  FP GFKLNVPLT  +G   L+ ME Y    ++++G  A+ + TA+  + +     G     A+  D++R+ TLH +     F+ +H      L SLW+LFRGKK+N+LR R DT  YD+ QLLLGT++FT+  FL  TI VYYTFF  V  + VG  V A
Sbjct:  349 LLHRRLLRDNIGWLETFPVGFKLNVPLTRNMGREILVVMEVYEWSTSALLGSTAR-QKTAIIVLGIMGMVFGFVMLSALIFDLVRVFTLHISVISKVFSKMHKTQLQALSSLWKLFRGKKQNILRSRTDTLEYDSMQLLLGTVLFTIFLFLFTTIVVYYTFFTAVN-LCVGVFVAA 522          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S2U6X6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6X6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.180e-30
Identity = 78/203 (38.42%), Postives = 113/203 (55.67%), Query Frame = 1
Query:   61 AADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGS---LTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQV 660
            A D  LG+V  + +L +T         +  L+H  +LR  + WL  FPAGFKLNVPLT  +G    + L   E  AS++      +   ++ +     + G  T LA+  D+LR+ + H A  H AF  ++ +   +  SLW LFRGKK+N+LR R DT  YD+ QLL+G ++FT+  FL  T+ VYYTFF +V +V   G V
Sbjct:  399 AFDGILGIVFGLSILSNTEGVRELISVSWSLVHERLLRNNIGWLETFPAGFKLNVPLTQNMGREILMLLSTQEWLASLLLSEPSRQTLLLRILGFTGITFGAMTLLAIAFDMLRIASFHIAVFHAAFRNIYLVQLHMFSSLWYLFRGKKKNILRQRSDTLEYDSMQLLVGMILFTISLFLLTTVLVYYTFFAVVYSVVNFGTV 601          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A3P3YN37_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YN37_PLABS)

HSP 1 Score: 122 bits (307), Expect = 1.810e-28
Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 1
Query:   58 LAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQ 636
            L AD   G++  VLL  ++       H A  +LHVDVLR ++ WL  FPAG KLN+PL   LG++ L  ++ + SI   L                    + ++A   D+L  +T H    HTAF+ L++L  S L +L +LF GKK N+L+ R+D+C ++  QLLLGT++FT++ FL PT+++YY FF IV+
Sbjct:  428 LLADIIAGLLIGVLLRGYSAEFLQGIHVAGQILHVDVLRRQIIWLMGFPAGMKLNLPLDQALGAMVLYEIDFWNSITTVLTPXXXXXXXXXXXXXXXXX-SMSVACAIDLLSTMTTHILFVHTAFSRLYSLALSALSALSKLFSGKKHNILQHRIDSCHFEVDQLLLGTILFTLIFFLFPTVAIYYLFFAIVR 619          
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S0VNY9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VNY9_9CRYP)

HSP 1 Score: 117 bits (292), Expect = 2.180e-28
Identity = 74/197 (37.56%), Postives = 105/197 (53.30%), Query Frame = 1
Query:   67 DASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQ 657
            D  LG+  C   L+H+     A   A  + H   + + + W+   PAG KLN  L + LG+L ++G++ +    G         +  ++V    G  T   A+  D+L L T+H  T +   A  H L + +L +LW+LFRGKKRNVLR R+D C Y   QLLLGTL+FT+L FL PT  VYY  F ++ A   G Q
Sbjct:   33 DLLLGLWCCSYTLKHSREVLEAVDAASQV-HTRAVLQAVRWIMGVPAGLKLNDSLDYCLGNLCILGLQCFQVAYGLCRPLFPVVLLTVSVSGVFGA-TIMAAIISDLLSLATMHLYTFYALGARWHGLQTRVLSTLWRLFRGKKRNVLRGRIDACDYSLDQLLLGTLLFTLLVFLFPTTYVYYLLFFLLYAAVSGVQ 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHV3_ECTSI6.550e-13989.43Phosphatidylinositol glycan anchor biosynthesis, c... [more]
A0A6H5K7D0_9PHAE8.520e-13489.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1CDH3_9STRA3.950e-4045.41Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6A7FTJ0_9CRUS1.110e-3441.32Gpi1p n=1 Tax=Hirondellea gigas TaxID=1518452 RepI... [more]
A0A835ZDM7_9STRA1.520e-3237.56N-acetylglucosaminyl transferase component-domain-... [more]
A0A0H5R8I3_9EUKA2.860e-3136.32Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A7S4K6Y8_9STRA3.780e-3143.75Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2U6X6_9STRA3.180e-3038.42Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A3P3YN37_PLABS1.810e-2838.86Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A7S0VNY9_9CRYP2.180e-2837.56Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14154contigH-canaliculatus_F_contig14154:57..2103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score399.8
Seed ortholog evalue8.4e-109
Seed eggNOG ortholog2880.D7FHV3
Preferred namePIGQ
KEGG koko:K03860,ko:K15102
KEGG TC2.A.29.4
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,map00563,map01100
GOsGO:0000506,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005975,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016254,GO:0016740,GO:0016757,GO:0016758,GO:0017176,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071704,GO:0090407,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
EggNOG free text desc.phosphatidylinositol N-acetylglucosaminyltransferase activity
EggNOG OGsKOG1183@1,KOG1183@2759
Ec32 ortholog descriptionN-acetylglucosaminyl transferase component
Ec32 orthologEc-00_000550.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04147
Hectar predicted targeting categorysignal peptide
Exons4
Model size681
Cds size681
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14154.3273.1prot_H-canaliculatus_F_contig14154.3273.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14154 57..2103 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.027135-CDS-H-canaliculatus_F_contig14154:56..2821622929165.027135-CDS-H-canaliculatus_F_contig14154:56..282Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 57..282 -
1696845702.0255413-CDS-H-canaliculatus_F_contig14154:56..2821696845702.0255413-CDS-H-canaliculatus_F_contig14154:56..282Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 57..282 -
1622929165.0434823-CDS-H-canaliculatus_F_contig14154:936..10781622929165.0434823-CDS-H-canaliculatus_F_contig14154:936..1078Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 937..1078 -
1696845702.039889-CDS-H-canaliculatus_F_contig14154:936..10781696845702.039889-CDS-H-canaliculatus_F_contig14154:936..1078Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 937..1078 -
1622929165.0569003-CDS-H-canaliculatus_F_contig14154:1512..16601622929165.0569003-CDS-H-canaliculatus_F_contig14154:1512..1660Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 1513..1660 -
1696845702.0546772-CDS-H-canaliculatus_F_contig14154:1512..16601696845702.0546772-CDS-H-canaliculatus_F_contig14154:1512..1660Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 1513..1660 -
1622929165.0716677-CDS-H-canaliculatus_F_contig14154:1938..21031622929165.0716677-CDS-H-canaliculatus_F_contig14154:1938..2103Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 1939..2103 -
1696845702.066752-CDS-H-canaliculatus_F_contig14154:1938..21031696845702.066752-CDS-H-canaliculatus_F_contig14154:1938..2103Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14154 1939..2103 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14154.3273.1

>prot_H-canaliculatus_F_contig14154.3273.1 ID=prot_H-canaliculatus_F_contig14154.3273.1|Name=mRNA_H-canaliculatus_F_contig14154.3273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=227bp
QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALH
LLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLA
QWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNL
HSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPT
ISVYYTFFCIVQAVSVGGQVRAPPPPP
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mRNA from alignment at H-canaliculatus_F_contig14154:57..2103-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14154.3273.1 ID=mRNA_H-canaliculatus_F_contig14154.3273.1|Name=mRNA_H-canaliculatus_F_contig14154.3273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2047bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14154:57..2103- (Hapterophycus canaliculatus Oshoro5f female)
CAACCGCGACCCTTCCAGGTAGAAGGCCTTGTAGGGCTGAGCCACTGGCT GTTCGGCCTGGCGGCCGACGCATCGCTGGGGGTTGTGGCGTGCGTGCTGC TGCTGCGGCACACCGGCGCCGCGGCGGGTGCTGCTCATCAGGCCTTGCAC CTCCTCCACGTTGATGTGAGACCAGGAGAGGGGGAGGGAGGGAGGAGAGA GGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTTGTGGAGTAGATTGGC CTGCTTGCTTGTACCCCTTGTCTGCACTGAGGGACAAGGTGGTGAGGTTG CATCCACACTTTGCATCGTTGCAGTTGATGTAGTCGTTGATGGTGTAGGC GTGATCGGCGGTACGGCTGGTCCATGATGGTATGTTTGGCCGAAGCCTCA CACAGGAGCCTTTGCCCCTCACGCCCTCACATAATATCGACAGGTGCTGC GCGAAGAGCTAGAGTGGCTCAATTACTTCCCCGCAGGCTTCAAGCTCAAC GTTCCGCTGACGCACACCCTGGGCTCGCTGACCCTGATCGGCATGGAAGC CTACGCCTCCATCGTAGGGCACCTGGCCCAGTGGGAGGCGAGTTATTCGG TTGTTTTCGTAGCACTCGGTAAAGGCTGCAGCCGCTGTGGTTCGCGTCAA GACCAAGGCGGGGAAGTCGTGCTCTGTTCTCGATAGGCGCAGAACGCCGC TGGGGGGCGCAAAACCCAGCTGAATCGCGGCCGGCCGTCGTGGAGGCAGA CACTGAACTCCGTGGCTCGCAGAGCCTGGCAAGACATCGAAAAGCGGGAT CGAAGACGACCTTTGCGATTGGGAGCCCGTCGTATCTCTCGTTCTCCTTT CCCATTTTCCGCTGAGCAAACGCGTACTTTTGATGCTTGGAGAAAATTAC TTGTTTCCGTGTGCGTGCGGTCGTGCGTGCTCTGACGGCAACCTTCCCCC GCTTCTGCTGCTTCGGGGCTCCGTGTCTGGGGACCGCTGCACGCTCGCGG GCACCACGCGCACGCTCTCAGGGAGCGGCCATGAAGGCGATCGCGGTCTG CGCGGCGAGCGGAGGCCTCACCACAGCTCTCGCCGTCTGCCACGACGTCC TGAGGCTCCTCACGCTGCACACGGCCACAACGCACACCGCCTTCGCCGCT CTGCACAACCTGCACAGGTGCCGTACCGTATACCTTACCGTGTACCTTAC CGTGTACCGTACCGTGTACCGTACCATGTACCGTCCCGTTACCGTGCCGT GCCGCGGTGTTCGACTCGTTACGTTGTGGATGGGCAAGATGCGGGCGTGT CCTCTCTGTCTTTGGAGGCTGGCGCACGCGGGAGAAAGGCAGACGGTGCA AAGAGCTTTCACGACGGGTTGCCAAGAGCTTTTCGACGAATGAGTGTCAA TACTTTGAAGCTTTTTGCAGCCTGTCGATTGTCCATCTTCGGCCTCTGAG CTTGGAGCTTGTCGTCGCTTGCCGCTTCGCGTTACCTGCATGGAGGTCGG GGGTTCTAGCCATTCAAGGTTTTCCCCTGGAAGGCGTTGGCGTGTTCTCG ATGATGTTTCGCGTTATTCGATCGACGTGGCGCTTCTGCACGTTGCAGGG ATGCCAGTTCGACCTTTCAGCCTCCTATCGCTCCCCCGCCCCACTCCGCT GCTGCCCCTCCCCTTTATTCGGGCGTGCTGCTGGAAGAGCGAAAACACCG ACCTTCGTTTCCGCCCAAGCAGCGTCCATGTCGCCTCCTTGTGTGGATCG CCTCCTTCCTCCGTGTCACTCTCGCGTCCCCTCCACCCCTGCTCTCGAAC CACGGGTGATTCCGCTTCCAGCTCTCTCCTGGGCTCTCTGTGGCAGCTCT TCCGCGGCAAGAAGCGGAACGTGCTGAGGTGCAGGGTGGACACGTGCATG TACGACGCCTGCCAGCTGCTGCTGGGCACGCTGGTCTTCACCGTGCTGTC CTTCCTGACCCCGACCATCTCCGTGTACTACACCTTCTTCTGCATCGTGC AGGCGGTGTCTGTCGGAGGGCAGGTGCGCGCCCCCCCCCCCCCCCCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14154:57..2103-

>mRNA_H-canaliculatus_F_contig14154.3273.1 ID=mRNA_H-canaliculatus_F_contig14154.3273.1|Name=mRNA_H-canaliculatus_F_contig14154.3273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1362bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14154:57..2103- (Hapterophycus canaliculatus Oshoro5f female)
CAACCGCGACCCTTCCAGGTAGAAGGCCTTGTAGGGCTGAGCCACTGGCT
GTTCGGCCTGGCGGCCGACGCATCGCTGGGGGTTGTGGCGTGCGTGCTGC
TGCTGCGGCACACCGGCGCCGCGGCGGGTGCTGCTCATCAGGCCTTGCAC
CTCCTCCACGTTGATCAACCGCGACCCTTCCAGGTAGAAGGCCTTGTAGG
GCTGAGCCACTGGCTGTTCGGCCTGGCGGCCGACGCATCGCTGGGGGTTG
TGGCGTGCGTGCTGCTGCTGCGGCACACCGGCGCCGCGGCGGGTGCTGCT
CATCAGGCCTTGCACCTCCTCCACGTTGATGTGCTGCGCGAAGAGCTAGA
GTGGCTCAATTACTTCCCCGCAGGCTTCAAGCTCAACGTTCCGCTGACGC
ACACCCTGGGCTCGCTGACCCTGATCGGCATGGAAGCCTACGCCTCCATC
GTAGGGCACCTGGCCCAGTGGGAGGCGAGTGCTGCGCGAAGAGCTAGAGT
GGCTCAATTACTTCCCCGCAGGCTTCAAGCTCAACGTTCCGCTGACGCAC
ACCCTGGGCTCGCTGACCCTGATCGGCATGGAAGCCTACGCCTCCATCGT
AGGGCACCTGGCCCAGTGGGAGGCGACGGCCATGAAGGCGATCGCGGTCT
GCGCGGCGAGCGGAGGCCTCACCACAGCTCTCGCCGTCTGCCACGACGTC
CTGAGGCTCCTCACGCTGCACACGGCCACAACGCACACCGCCTTCGCCGC
TCTGCACAACCTGCACAGCGGCCATGAAGGCGATCGCGGTCTGCGCGGCG
AGCGGAGGCCTCACCACAGCTCTCGCCGTCTGCCACGACGTCCTGAGGCT
CCTCACGCTGCACACGGCCACAACGCACACCGCCTTCGCCGCTCTGCACA
ACCTGCACAGCTCTCTCCTGGGCTCTCTGTGGCAGCTCTTCCGCGGCAAG
AAGCGGAACGTGCTGAGGTGCAGGGTGGACACGTGCATGTACGACGCCTG
CCAGCTGCTGCTGGGCACGCTGGTCTTCACCGTGCTGTCCTTCCTGACCC
CGACCATCTCCGTGTACTACACCTTCTTCTGCATCGTGCAGGCGGTGTCT
GTCGGAGGGCAGGTGCGCGCCCCCCCCCCCCCCCCCCTCTCTCCTGGGCT
CTCTGTGGCAGCTCTTCCGCGGCAAGAAGCGGAACGTGCTGAGGTGCAGG
GTGGACACGTGCATGTACGACGCCTGCCAGCTGCTGCTGGGCACGCTGGT
CTTCACCGTGCTGTCCTTCCTGACCCCGACCATCTCCGTGTACTACACCT
TCTTCTGCATCGTGCAGGCGGTGTCTGTCGGAGGGCAGGTGCGCGCCCCC
CCCCCCCCCCCC
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