mRNA_H-canaliculatus_F_contig14154.3273.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: D7FHV3_ECTSI (Phosphatidylinositol glycan anchor biosynthesis, class Q n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV3_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 6.550e-139 Identity = 203/227 (89.43%), Postives = 211/227 (92.95%), Query Frame = 1
Query: 1 QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQVRAPPPPP 681
QP +VEGLVGLSHWLFG+AADA+LGVVAC LLLRHT AAA AAHQALHLLHVDVL EELEWLNYFPAGFKLNVPLTHTLGSLTL+GMEAYASIVG LAQWE AMKAIA+CAA GGLTTALAV HD+LRLL LHTAT HTAFAALHNLHSSLLGSLWQLFRG+KRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAV+VGGQVR P PPP
Sbjct: 124 QPAERRVEGLVGLSHWLFGVAADAALGVVACALLLRHTEAAARAAHQALHLLHVDVLSEELEWLNYFPAGFKLNVPLTHTLGSLTLVGMEAYASIVGQLAQWEGAAMKAIAICAAGGGLTTALAVAHDILRLLALHTATAHTAFAALHNLHSSLLGSLWQLFRGRKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVAVGGQVRPPSPPP 350
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A6H5K7D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7D0_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 8.520e-134 Identity = 197/219 (89.95%), Postives = 205/219 (93.61%), Query Frame = 1
Query: 1 QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQ 657
QP +VEGLVGLSHWLFG+AADASLGVVACVLLLRHT AAA AAHQALHLLHVDVL EELEWLNYFPAGFKLNVPLTHTLGSLTL+GMEAYASIVG LAQWE MKAIA+C A GGL+TALAV HD+LRLLTLHTAT HTAFAALHNLHSSLLGSLWQLFRG+KRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAV+VGGQ
Sbjct: 46 QPAERRVEGLVGLSHWLFGVAADASLGVVACVLLLRHTEAAARAAHQALHLLHVDVLSEELEWLNYFPAGFKLNVPLTHTLGSLTLVGMEAYASIVGQLAQWEGATMKAIAICGAGGGLSTALAVAHDILRLLTLHTATAHTAFAALHNLHSSLLGSLWQLFRGRKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVAVGGQ 264
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S1CDH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDH3_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.950e-40 Identity = 94/207 (45.41%), Postives = 121/207 (58.45%), Query Frame = 1
Query: 31 VGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAA---HQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAV 642
V L + +F + AD +G+ A V L +H G+ H LHVDVL E++ WL PAG KLN L H LGS L ++ + ++ L E + +A G T LAV HD L L+T+H ++ FA LHN S++GSLW+LFRGKKRNVLR RVD+C YD QLL+GTL+FTVL FL PT VYY FF V +
Sbjct: 99 VRLFNSMFLVVADVGIGIAAGVFLSKHAGSRDIVLRWFHTVGRFLHVDVLHEQVVWLMGLPAGLKLNQDLDHFLGSWVLRMIDLWNTVTTVLTPLEPVIVVVVATLGVCGW-TFVLAVAHDGLELMTVHIYLLYSVFAWLHNAQLSVIGSLWRLFRGKKRNVLRHRVDSCDYDVPQLLVGTLLFTVLFFLFPTSLVYYIFFTAVHLI 304
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A6A7FTJ0_9CRUS (Gpi1p n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FTJ0_9CRUS) HSP 1 Score: 140 bits (353), Expect = 1.110e-34 Identity = 69/167 (41.32%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 136 HQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQ 636
HQA H LH+DV+R + WL PAG KLN L H GS+ L G++ + +I + WE + I+ G + L++C D+L ++T+H +T FA L+++ L SLW+LFRGKK+N+LR R+D+C +D QL++GT++F+++ FL PTI+ Y+ FF V+
Sbjct: 377 HQAGHFLHLDVMRANIVWLMGLPAGLKLNHNLNHCFGSMVLFGIDFWDAITSVVTVWEPAVLWLISFAGILGA-SMVLSLCSDILSVVTIHVDFVYTTFAKLYSIEIKALSSLWKLFRGKKKNILRQRIDSCQFDVDQLMVGTILFSLIFFLLPTIATYFLFFSYVR 542
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A835ZDM7_9STRA (N-acetylglucosaminyl transferase component-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM7_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.520e-32 Identity = 74/197 (37.56%), Postives = 113/197 (57.36%), Query Frame = 1
Query: 67 DASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQ 657
D SLG + H + + + L ++ WLN+ P GFKLN+P TLG T++ ++ Y +I+ + A+ + +A GG++TA A D+ +LTLH H + + L+ + + + SLW LFRGKKRNVLR R+D+C +D QL+LGTL+FTVL FL PT++V+Y FF +++ V Q
Sbjct: 299 DLSLGCALAAGVYCHQASLVSCLSRCSRFVQEAPLLRQITWLNHHPGGFKLNLPAATTLGQATIMIVQVYCAIIRMALAHVQWLVLALCLSSAFGGISTASAAVFDLFWVLTLHVTLIHRSLSVLYRGNLTAVISLWHLFRGKKRNVLRHRIDSCSFDHAQLMLGTLMFTVLLFLLPTVAVHYLFFSLLKMAQVAVQ 495
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A0H5R8I3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R8I3_9EUKA) HSP 1 Score: 130 bits (327), Expect = 2.860e-31 Identity = 77/212 (36.32%), Postives = 120/212 (56.60%), Query Frame = 1
Query: 1 QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQ 636
+P+ + ++ + D G+ + L ++ H +LHVDVLR ++ WL PAG KLN L LG + L G++ + +I L E + +++ A G + A+A D+L ++T H HTAF+ L++L S L +L +LF GKKRNVL+ RVD+C +D QLLLGT++FT++ FL PT+++YY FF IV+
Sbjct: 308 KPKSYVNASMISFGSSVCQFLVDVITGIALGIFLRTYSTFILEIIHDGGRILHVDVLRRQVIWLMGLPAGMKLNFALDQALGLMVLYGIDFWNAITTVLTPLEHLIIVGVSIMAVFGT-SIAVACAIDLLSMMTTHILFIHTAFSRLYSLALSALSALSKLFSGKKRNVLQRRVDSCHFDVDQLLLGTILFTLIFFLFPTVAIYYLFFAIVR 518
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S4K6Y8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6Y8_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.780e-31 Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 151 LLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAY----ASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQVRA 666
LLH +LR+ + WL FP GFKLNVPLT +G L+ ME Y ++++G A+ + TA+ + + G A+ D++R+ TLH + F+ +H L SLW+LFRGKK+N+LR R DT YD+ QLLLGT++FT+ FL TI VYYTFF V + VG V A
Sbjct: 349 LLHRRLLRDNIGWLETFPVGFKLNVPLTRNMGREILVVMEVYEWSTSALLGSTAR-QKTAIIVLGIMGMVFGFVMLSALIFDLVRVFTLHISVISKVFSKMHKTQLQALSSLWKLFRGKKQNILRSRTDTLEYDSMQLLLGTVLFTIFLFLFTTIVVYYTFFTAVN-LCVGVFVAA 522
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S2U6X6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6X6_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.180e-30 Identity = 78/203 (38.42%), Postives = 113/203 (55.67%), Query Frame = 1
Query: 61 AADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGS---LTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQV 660
A D LG+V + +L +T + L+H +LR + WL FPAGFKLNVPLT +G + L E AS++ + ++ + + G T LA+ D+LR+ + H A H AF ++ + + SLW LFRGKK+N+LR R DT YD+ QLL+G ++FT+ FL T+ VYYTFF +V +V G V
Sbjct: 399 AFDGILGIVFGLSILSNTEGVRELISVSWSLVHERLLRNNIGWLETFPAGFKLNVPLTQNMGREILMLLSTQEWLASLLLSEPSRQTLLLRILGFTGITFGAMTLLAIAFDMLRIASFHIAVFHAAFRNIYLVQLHMFSSLWYLFRGKKKNILRQRSDTLEYDSMQLLVGMILFTISLFLLTTVLVYYTFFAVVYSVVNFGTV 601
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A3P3YN37_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YN37_PLABS) HSP 1 Score: 122 bits (307), Expect = 1.810e-28 Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 58 LAADASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQ 636
L AD G++ VLL ++ H A +LHVDVLR ++ WL FPAG KLN+PL LG++ L ++ + SI L + ++A D+L +T H HTAF+ L++L S L +L +LF GKK N+L+ R+D+C ++ QLLLGT++FT++ FL PT+++YY FF IV+
Sbjct: 428 LLADIIAGLLIGVLLRGYSAEFLQGIHVAGQILHVDVLRRQIIWLMGFPAGMKLNLPLDQALGAMVLYEIDFWNSITTVLTPXXXXXXXXXXXXXXXXX-SMSVACAIDLLSTMTTHILFVHTAFSRLYSLALSALSALSKLFSGKKHNILQHRIDSCHFEVDQLLLGTILFTLIFFLFPTVAIYYLFFAIVR 619
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Match: A0A7S0VNY9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VNY9_9CRYP) HSP 1 Score: 117 bits (292), Expect = 2.180e-28 Identity = 74/197 (37.56%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 67 DASLGVVACVLLLRHTGAAAGAAHQALHLLHVDVLREELEWLNYFPAGFKLNVPLTHTLGSLTLIGMEAYASIVGHLAQWEATAMKAIAVCAASGGLTTALAVCHDVLRLLTLHTATTHTAFAALHNLHSSLLGSLWQLFRGKKRNVLRCRVDTCMYDACQLLLGTLVFTVLSFLTPTISVYYTFFCIVQAVSVGGQ 657
D LG+ C L+H+ A A + H + + + W+ PAG KLN L + LG+L ++G++ + G + ++V G T A+ D+L L T+H T + A H L + +L +LW+LFRGKKRNVLR R+D C Y QLLLGTL+FT+L FL PT VYY F ++ A G Q
Sbjct: 33 DLLLGLWCCSYTLKHSREVLEAVDAASQV-HTRAVLQAVRWIMGVPAGLKLNDSLDYCLGNLCILGLQCFQVAYGLCRPLFPVVLLTVSVSGVFGA-TIMAAIISDLLSLATMHLYTFYALGARWHGLQTRVLSTLWRLFRGKKRNVLRGRIDACDYSLDQLLLGTLLFTLLVFLFPTTYVYYLLFFLLYAAVSGVQ 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14154.3273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14154.3273.1 >prot_H-canaliculatus_F_contig14154.3273.1 ID=prot_H-canaliculatus_F_contig14154.3273.1|Name=mRNA_H-canaliculatus_F_contig14154.3273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=227bp QPRPFQVEGLVGLSHWLFGLAADASLGVVACVLLLRHTGAAAGAAHQALHback to top mRNA from alignment at H-canaliculatus_F_contig14154:57..2103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14154.3273.1 ID=mRNA_H-canaliculatus_F_contig14154.3273.1|Name=mRNA_H-canaliculatus_F_contig14154.3273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2047bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14154:57..2103- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14154:57..2103- >mRNA_H-canaliculatus_F_contig14154.3273.1 ID=mRNA_H-canaliculatus_F_contig14154.3273.1|Name=mRNA_H-canaliculatus_F_contig14154.3273.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1362bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14154:57..2103- (Hapterophycus canaliculatus Oshoro5f female)back to top |