mRNA_H-canaliculatus_F_contig1414.3266.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1414.3266.1 vs. uniprot
Match: A0A6H5JRF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 7.220e-51 Identity = 191/290 (65.86%), Postives = 211/290 (72.76%), Query Frame = 1
Query: 427 LEAKVLASSSAS--NGTA-AGRDQPGKGYTAADAEGGAARSLVEDGE-EGGAFAAGGSAEADGEEDLVAKVATMQAELDDLHAMLDNVSAERDAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NDLRRAGGV-------GASDVGSSGADVASKDEIRRLRRDCDKLRDQLCEYEEGEVPPPGAKRIQALEDQVERLSEENMRQSEKARSLSLQVEREKEELSQELISAKLQVAQLYMEVDGLKLNHRQAT-IAANAAHALQMESANGSPATSRS 1257
LEA+VLASSS+S NGTA G GYTA EGGAARSL DGE EGGA AA AEA+G EDL AKVAT+QAELDD+HAMLDNVSAERDAAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NDLRRAGGV G++D +SG + S++E+ RLRRDCDKLRDQL E+E GEVPPPGAKRI++LE QVERLSEENMRQS+KA MEVDGLKL HRQAT +AA AHAL M+SA+GSPAT +S
Sbjct: 526 LEARVLASSSSSAPNGTANIGGLHRDSGYTA---EGGAARSLAGDGEAEGGAAAA--EAEANGGEDLSAKVATLQAELDDMHAMLDNVSAERDAALVGSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDLRRAGGVREAARRGGSADDLTSG-EAGSEEEVLRLRRDCDKLRDQLSEFEGGEVPPPGAKRIKSLEAQVERLSEENMRQSDKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVDGLKLQHRQATAVAAREAHALGMDSASGSPATPKS 809
BLAST of mRNA_H-canaliculatus_F_contig1414.3266.1 vs. uniprot
Match: D8LMT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 4.060e-32 Identity = 97/136 (71.32%), Postives = 109/136 (80.15%), Query Frame = 1
Query: 307 ADEEGTQKQLLEIMALLKDAETAKRMVQDELVAKNEKVEELEAKVLASSSAS--NGTA-AGRDQPGKGYTAADAEGGAARSLVEDGE-EGGAFAAGGSAEADGEEDLVAKVATMQAELDDLHAMLDNVSAERDAAL 702
ADEEGT+ QLLE+M+LLK+AE AK+ QDEL K+EK+EELEAKVLASS++S NGTA G GYTA EGGAARSLV DGE EGGA AA AEA+G EDL AKVAT+QAELDD+HAMLDNVSAERDAAL
Sbjct: 464 ADEEGTKDQLLEMMSLLKEAEAAKQAAQDELAGKDEKIEELEAKVLASSTSSPPNGTANTGGLHHDSGYTA---EGGAARSLVGDGEAEGGAAAA--EAEANGGEDLSAKVATLQAELDDMHAMLDNVSAERDAAL 594
BLAST of mRNA_H-canaliculatus_F_contig1414.3266.1 vs. uniprot
Match: D8LMU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU0_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 5.580e-21 Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 1
Query: 1039 MRQSEKARSLSLQVEREKEELSQELISAKLQVAQLYMEVDGLKLNHRQAT-IAANAAHALQMESANGSPATSRS 1257
MRQS+KA SL++QVEREKEEL+Q+LISAKLQVAQLYMEVDGLKL HRQAT +AA AHAL M+SA+GSPAT +S
Sbjct: 1 MRQSDKANSLAVQVEREKEELNQQLISAKLQVAQLYMEVDGLKLQHRQATAVAAREAHALGMDSASGSPATPKS 74
BLAST of mRNA_H-canaliculatus_F_contig1414.3266.1 vs. uniprot
Match: A0A6H5KST7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KST7_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 2.310e-9 Identity = 64/138 (46.38%), Postives = 79/138 (57.25%), Query Frame = 1
Query: 331 QLLEIMALLKDAETAKRMVQDELVAKNEKVEELEAKVLAS---SSASNGTAAGRDQPGKGYTAADAEGGAARSLV----EDGEEGGAFAA--------GGSAEADGEEDLVAKVATMQAELDDLHAMLDNVSAERDAA 699
+L+E M LLKDAE A RM + ELV KNE+ ++ K S ++ +N T A QPG A E G AR LV E EEG A A GG E G+ D+ AKVA MQ+ELD LHA+LDN+SA+R AA
Sbjct: 389 KLVETMTLLKDAEKAMRMARGELVGKNERCKQQVGKDAVSFCEANNTNTTVALDHQPGCNAPATGVECGKARPLVGGRGEGAEEGSAIEAMATTADKSGGEGEGQGQ-DMSAKVAKMQSELDGLHAVLDNLSAKRAAA 525
BLAST of mRNA_H-canaliculatus_F_contig1414.3266.1 vs. uniprot
Match: D7FMI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI6_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 2.500e-7 Identity = 62/140 (44.29%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 331 QLLEIMALLKDAETAKRMVQDELVAKNEKVEEL---EAKVLASSSASNGTAAGRDQPGKGYTAADAEGGAARSLVEDGEEGGAFAAGGSA---------EADGE-----EDLVAKVATMQAELDDLHAMLDNVSAERDAA 699
+L+E M LLKDAE A RM + ELV K+E+ ++ +A ++ +N T QPG A E G AR LV EEG A GSA ++ GE +D+ AKVA MQAELD LHA+LDN+SAER AA
Sbjct: 303 KLVETMTLLKDAEKAIRMARGELVGKSERCKQQVGEDAVSFCEANITNATGGLDHQPGCSAPATGVECGKARPLVSGLEEG---AGEGSAMEAMATTADKSGGEGXXXXQDMSAKVAKMQAELDGLHAVLDNLSAERAAA 439 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1414.3266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1414.3266.1 >prot_H-canaliculatus_F_contig1414.3266.1 ID=prot_H-canaliculatus_F_contig1414.3266.1|Name=mRNA_H-canaliculatus_F_contig1414.3266.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=459bp DSRQRAKEADLRAEEAEVLAREATLKKRAEYEDVAERLRVVRQELEQAECback to top mRNA from alignment at H-canaliculatus_F_contig1414:18940..26467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1414.3266.1 ID=mRNA_H-canaliculatus_F_contig1414.3266.1|Name=mRNA_H-canaliculatus_F_contig1414.3266.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7528bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1414:18940..26467- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1414:18940..26467- >mRNA_H-canaliculatus_F_contig1414.3266.1 ID=mRNA_H-canaliculatus_F_contig1414.3266.1|Name=mRNA_H-canaliculatus_F_contig1414.3266.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2754bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1414:18940..26467- (Hapterophycus canaliculatus Oshoro5f female)back to top |