mRNA_H-canaliculatus_F_contig14121.3259.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI) HSP 1 Score: 217 bits (553), Expect = 1.810e-66 Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTV QVAACGFHTAALT AGE+FTWGEG+
Sbjct: 123 KLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGK 227
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC) HSP 1 Score: 153 bits (387), Expect = 2.040e-43 Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHG+E+GH TP V+ L GA V QIACGSRHT ++T G +YTWGDKENGV GH +GHQYLPR+LES+ AK V Q++ACGFHTA +TDAGE+FTWGEG+
Sbjct: 116 KLGHGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGK 218
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A7S1GDB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDB4_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.320e-42 Identity = 63/105 (60.00%), Postives = 84/105 (80.00%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNE+GH PC+V L G +T++ACGSRHTV LTD G+V++WGD +NGV GH + DGHQYLPR++ L+++ KQVAACGFHTA LT AG++++WGEG+
Sbjct: 114 KLGHGNENGHSRPCVVDVL--SGVHITEVACGSRHTVALTDKGEVFSWGDSDNGVCGHGDGDGHQYLPRLVAGLRSEAAKQVAACGFHTAVLTTAGQVWSWGEGK 216
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A2D4CB68_PYTIN (BTB domain-containing protein (Fragment) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB68_PYTIN) HSP 1 Score: 150 bits (380), Expect = 7.600e-41 Identity = 67/105 (63.81%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNE+GH TPC+V+ L+ + R Q+ACGSRHTVVL + VYTWGDKE GV GH + DGHQYLPR++E L+ + VKQ++ACGFHTAALT++GE+FT+GEG+
Sbjct: 114 KLGHGNETGHSTPCLVEALKAQPVR--QVACGSRHTVVLLENKDVYTWGDKEKGVSGHGDTDGHQYLPRVVEELRGQHVKQISACGFHTAALTESGEVFTFGEGK 216
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A7S2A6T9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6T9_TRICV) HSP 1 Score: 148 bits (374), Expect = 1.540e-40 Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNESGH TP V+ L G V+QIACGSRHT V+T G +YTWGDKENGV GH + +GHQY P++LE L K + Q++ACGFHT LTDAGE++TWGEG+
Sbjct: 14 KLGHGNESGHSTPRRVEGL--VGLTVSQIACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRIVQLSACGFHTGCLTDAGEVYTWGEGK 116
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A6V2KJN4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2KJN4_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.040e-40 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNESGH TP V+ L G V+QIACGSRHT V+T G +YTWGDKENGV GH + +GHQY P++LE L K V Q++ACGFHT LTDA E+FTWGEG+
Sbjct: 32 KLGHGNESGHSTPRRVEGL--VGLTVSQIACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRVVQLSACGFHTGCLTDAAEVFTWGEGK 134
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A7S2R4V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4V3_9STRA) HSP 1 Score: 143 bits (360), Expect = 5.880e-40 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNESGH TP ++ L G V+QIACGSRHT V+T G +YTWGDKENGV GH + +GHQY P++LE L K V Q++ACGFHT LTD+ E++TWGEG+
Sbjct: 73 KLGHGNESGHSTPKRLEGLT--GLTVSQIACGSRHTAVITSTGAMYTWGDKENGVAGHGDNEGHQYTPKLLEKLAGKRVIQLSACGFHTGCLTDSREVYTWGEGK 175
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A7S2PM89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PM89_9STRA) HSP 1 Score: 143 bits (361), Expect = 8.550e-40 Identity = 66/105 (62.86%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHG+ESGH TP V+ L G V IACGSRHT V+T+ G +YTWGDKENGV GH + DGHQY P++LE L K V Q++ACGFHT LTD GE FTWGEG+
Sbjct: 66 KLGHGSESGHSTPRRVEAL--VGLSVIDIACGSRHTAVVTNKGCLYTWGDKENGVAGHGDTDGHQYTPKLLERLSGKKVVQLSACGFHTGCLTDQGECFTWGEGK 168
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.370e-39 Identity = 67/105 (63.81%), Postives = 85/105 (80.95%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNE+GH TP +V+ L+ G +V Q+ACGSRHTVVL + VYTWGDKENGV GH +G QYLP LE L+ K+VKQ++ACGFHTAALTDAGE++T+G+G+
Sbjct: 136 KLGHGNETGHSTPFLVESLK--GLQVRQVACGSRHTVVLLENRDVYTWGDKENGVSGHGETEGQQYLPSSLEELRGKSVKQISACGFHTAALTDAGEVYTFGDGK 238
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Match: A0A7S2U8G3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8G3_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.830e-39 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 1 QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVKQVAACGFHTAALTDAGEMFTWGEGR 315
+LGHGNESGH TP V+ L G V++IACGSRHT V+T G +Y WGDKENGV GH + +GHQY P++LE L K V Q++ACGFHT LTDAGE++TWGEG+
Sbjct: 173 KLGHGNESGHSTPRRVEGL--VGLAVSEIACGSRHTAVITSTGALYVWGDKENGVCGHGDTEGHQYTPKLLERLAGKRVIQLSACGFHTGCLTDAGEIYTWGEGK 275 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14121.3259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14121.3259.1 >prot_H-canaliculatus_F_contig14121.3259.1 ID=prot_H-canaliculatus_F_contig14121.3259.1|Name=mRNA_H-canaliculatus_F_contig14121.3259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=113bp QLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDback to top mRNA from alignment at H-canaliculatus_F_contig14121:1824..2557+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14121.3259.1 ID=mRNA_H-canaliculatus_F_contig14121.3259.1|Name=mRNA_H-canaliculatus_F_contig14121.3259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=734bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14121:1824..2557+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14121:1824..2557+ >mRNA_H-canaliculatus_F_contig14121.3259.1 ID=mRNA_H-canaliculatus_F_contig14121.3259.1|Name=mRNA_H-canaliculatus_F_contig14121.3259.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=678bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14121:1824..2557+ (Hapterophycus canaliculatus Oshoro5f female)back to top |