mRNA_H-canaliculatus_F_contig14101.3251.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE) HSP 1 Score: 319 bits (818), Expect = 6.070e-102 Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 1
Query: 1 NNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
NNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDG MVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCH+LALVSRHEPADE+E FEIMNLVDPVLRTSNSGAVLAAV
Sbjct: 126 NNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSRHEPADEDETFEIMNLVDPVLRTSNSGAVLAAV 287
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: F0Y5E8_AURAN (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E8_AURAN) HSP 1 Score: 238 bits (607), Expect = 1.050e-72 Identity = 113/162 (69.75%), Postives = 138/162 (85.19%), Query Frame = 1
Query: 1 NNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
+N DPMVRGLALRSLCSLRLP ++EYI PL+ASL+DA+SYVRKTGVM ILK++H+ P++V G +VD LY+ML+D D VVANC+VVLNEIM D GG+A NTAIVHHLLGRL DFNEWG+C VL LV+R+EPA +EE F++MN++DPVLRTSNSG VL +
Sbjct: 115 SNDDPMVRGLALRSLCSLRLPTVLEYIQGPLRASLSDAHSYVRKTGVMGILKVYHMDPESVRGGDLVDVLYDMLRDGDGTVVANCIVVLNEIMLDEGGIAINTAIVHHLLGRLNDFNEWGLCSVLKLVARYEPASDEETFQVMNVLDPVLRTSNSGVVLECI 276
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A7S2SSW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSW9_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.970e-65 Identity = 106/162 (65.43%), Postives = 131/162 (80.86%), Query Frame = 1
Query: 1 NNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
NN DPMVRGLALRSLCSLRLP++VEYI+DP++ SL D N+YVR+TGVM ILK++HL P V+ ++D +Y+MLQD D VVANC++VLNE+M + GGMA N AIVHHLL RL DFNEWG+ VL LV+R+ P DE+E F IMNL+DPVLRT+NSG VL +
Sbjct: 112 NNDDPMVRGLALRSLCSLRLPSIVEYIADPIRKSLVDKNAYVRRTGVMGILKLFHLQPDMVKQSNLIDLIYDMLQDPDGGVVANCIMVLNEMMLEEGGMAVNQAIVHHLLERLNDFNEWGLHQVLELVTRYSPNDEQEIFTIMNLLDPVLRTTNSGVVLTTI 273
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.380e-63 Identity = 109/161 (67.70%), Postives = 131/161 (81.37%), Query Frame = 1
Query: 4 NQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
N+DPMVRGLALRSLCSLRLP++VEYIS+PL+ SLTDAN+YVRKTGVM ILK+ HL P V +G MVDTLY ML D DAQVV NC++ L+E+ A GGM+ + V LLGRL+ F+EWG+C VLALV R+ PADE+E F +MNL+DPVLRTSNSG VLA +
Sbjct: 140 NEDPMVRGLALRSLCSLRLPSIVEYISEPLRRSLTDANAYVRKTGVMGILKLHHLAPAVVREGNMVDTLYAMLHDVDAQVVTNCLLALDEMAAAQGGMSLSRDTVLLLLGRLDGFSEWGLCKVLALVRRYAPADEDELFSMMNLLDPVLRTSNSGVVLAVI 300
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A7S1C8U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8U9_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.070e-62 Identity = 100/160 (62.50%), Postives = 130/160 (81.25%), Query Frame = 1
Query: 4 NQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAA 483
+ DPM+RGLALRSLCSLRL +++EY+ PLK+SLTD+++YVRKTG+M ILK++HL P V++ +VDT+YNM++D D VV NC+V LNEIMAD GG+A N AI+HHLL R++DFNEWG C VL LV+R+ PA +EE F+IMN++D LR SNS VLAA
Sbjct: 104 DDDPMIRGLALRSLCSLRLTSVIEYVMVPLKSSLTDSSAYVRKTGIMGILKVYHLAPARVKESDLVDTMYNMVRDRDTVVVTNCLVALNEIMADEGGIAINQAIIHHLLTRIKDFNEWGQCVVLGLVARYRPATQEETFQIMNVLDVCLRVSNSAVVLAA 263
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A6A5A8F1_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A8F1_9STRA) HSP 1 Score: 201 bits (512), Expect = 5.220e-62 Identity = 97/158 (61.39%), Postives = 125/158 (79.11%), Query Frame = 1
Query: 4 NQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVL 477
N+DP+VRGLALRSLCSLRL M+EYI +PL+ SLTD ++YVRKTGV+ ILK++ L + ++D MVDTLYNM++D D QVV+NC+V LNEIMAD GG+A N IV HLL R+ +FNEWG C++L +VS + P+ EEE F IMN+++P LR SNS VL
Sbjct: 118 NEDPLVRGLALRSLCSLRLETMLEYIHEPLQHSLTDTSAYVRKTGVIGILKVFSLNKELIKDSEMVDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAVNQQIVLHLLTRISEFNEWGQCNILHVVSTYRPSSEEEIFNIMNILEPQLRVSNSAVVL 275
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A2D4BTI4_PYTIN (Adaptin_N domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTI4_PYTIN) HSP 1 Score: 202 bits (514), Expect = 7.120e-61 Identity = 96/158 (60.76%), Postives = 124/158 (78.48%), Query Frame = 1
Query: 4 NQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVL 477
N+DPMVRGLALRSLCSLRL +++EYI DPL+ SLTD ++YVRKTGV+ ILK++ L P + + M+DTLYNM++D D QVV+NC+V LNEIMAD GG+A N IV HLL R+ DFNEWG C++L +V+R++P +EE F IMN ++ LR SNS VL
Sbjct: 128 NEDPMVRGLALRSLCSLRLDSILEYIHDPLQQSLTDTSAYVRKTGVIGILKVFSLNPDLIRESDMIDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAINQQIVMHLLSRISDFNEWGQCNILHIVARYKPTSDEEVFNIMNTLEQCLRVSNSAVVL 285
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A7R9U8Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Z4_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.640e-60 Identity = 100/161 (62.11%), Postives = 128/161 (79.50%), Query Frame = 1
Query: 4 NQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
N+DP +RGLALR+LC+L+L + +EYI +P+ L D N+YVRKT VM ILK+ H+ V++ M+DTLY+ML+DSDAQVV+NC+VVLNE++ + GGMA N AIV HLL R+ DFNEW +C VL LV+R+EP DE+E F IMNL+DPVLRTSNSG VLA V
Sbjct: 134 NEDPFIRGLALRALCNLKLRSALEYILEPIHRGLKDPNAYVRKTAVMGILKLKHVDASLVDNSSMIDTLYDMLRDSDAQVVSNCIVVLNELLMEDGGMAINQAIVLHLLNRVSDFNEWSLCQVLDLVTRYEPTDEDETFNIMNLLDPVLRTSNSGVVLACV 294
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.450e-59 Identity = 101/160 (63.12%), Postives = 126/160 (78.75%), Query Frame = 1
Query: 10 DPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMA-DAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
DPMVRGLALR+LCSLRLP+M+EYIS PL+ +LTD + YVRKTGVM ILK++HL P VD LYNM+QD D VV NC++VL E++A + GGMA N ++ HLLGRL +FNEWG+ +LALV+++ PADEEE F IMNL+DPVLRTSNSG VL+ +
Sbjct: 125 DPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTI 284
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Match: B8C1G4_THAPS (Beta subunit of clathrin adaptor complex AP2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1G4_THAPS) HSP 1 Score: 206 bits (524), Expect = 3.860e-59 Identity = 99/161 (61.49%), Postives = 130/161 (80.75%), Query Frame = 1
Query: 4 NQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGVMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHVLALVSRHEPADEEEAFEIMNLVDPVLRTSNSGAVLAAV 486
N+DPMVRGLALRSLCSLRLP M+EY S+PL+ SL D ++YVRKTGVM ILKM+HL + + D LY+ML+D D+ VV NC++VLNEIMAD+GGMA N A++ HLL R+ +F+E+G+ VL LV R+ PA++EE F+IMNL+DPVLRT+N+GAV+A +
Sbjct: 137 NEDPMVRGLALRSLCSLRLPQMIEYTSEPLRRSLQDGHAYVRKTGVMGILKMYHLNKEEFDKAAFNDILYDMLRDPDSSVVTNCILVLNEIMADSGGMALNRAVMLHLLNRIHEFSEFGILSVLDLVPRYIPANDEEGFQIMNLLDPVLRTANAGAVVATI 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14101.3251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14101.3251.1 >prot_H-canaliculatus_F_contig14101.3251.1 ID=prot_H-canaliculatus_F_contig14101.3251.1|Name=mRNA_H-canaliculatus_F_contig14101.3251.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp MVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHback to top mRNA from alignment at H-canaliculatus_F_contig14101:24..1768+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14101.3251.1 ID=mRNA_H-canaliculatus_F_contig14101.3251.1|Name=mRNA_H-canaliculatus_F_contig14101.3251.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1745bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14101:24..1768+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14101:24..1768+ >mRNA_H-canaliculatus_F_contig14101.3251.1 ID=mRNA_H-canaliculatus_F_contig14101.3251.1|Name=mRNA_H-canaliculatus_F_contig14101.3251.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=942bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14101:24..1768+ (Hapterophycus canaliculatus Oshoro5f female)back to top |