prot_H-canaliculatus_F_contig1410.3247.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1410.3247.1
Unique Nameprot_H-canaliculatus_F_contig1410.3247.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length208
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1410.3247.1 vs. uniprot
Match: A0A6H5KSE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSE8_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 8.660e-42
Identity = 95/194 (48.97%), Postives = 119/194 (61.34%), Query Frame = 0 
Query:   11 MNLRPLLLPAAASLTRVLVVQGFSLASGTARGARQLSSYSRSGTAAVPCPTALGLPSRPSSVLPHTKPTSATAANKALLLSYRVRGGSKLSRNMATTSGAVESGGISDLKTPQEVVKFWFGPDPARLTTDGEYGQSFAAKWFGMGPPDQAFIDTQNMSKDLIQKTADDDLKGEEWDSPQGALAKLLLLDQFPRT 204
            M  R LL PAAA+L R + V+ F+  SG A   + LS          P    LG      + L  ++P S ++  + +         SK+SR MAT   A  SG I +LKT Q+VV FWFG D  RL +D EYGQSF AKWFG+GPPDQAFI TQN SK+L+ K    +LKGEEW++P+GALA+LLLLDQFPRT
Sbjct:    1 MLFRRLLFPAAATLARAVEVRSFTSTSGAAGAVQHLS--------VSPRRQQLG------AFLHGSEPLSRSSTGRTV---------SKVSRGMATGEKA-GSGEILNLKTAQDVVDFWFGTDLVRLASDREYGQSFGAKWFGVGPPDQAFIGTQNASKELMAKAGSGELKGEEWETPKGALARLLLLDQFPRT 170
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BLAST of mRNA_H-canaliculatus_F_contig1410.3247.1 vs. uniprot
Match: D7FVL0_ECTSI (Putative transmembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL0_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.850e-36
Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 0 
Query:  104 MATTSGAVESGGISDLKTPQEVVKFWFGPDPARLTTDGEYGQSFAAKWFGMGPPDQAFIDTQNMSKDLIQKTADDDLKGEEWDSPQGALAKLLLLDQFPRT 204
            MAT  GA   G I +LKT Q+VV FWFG D ARL +D EYGQSF AKWFG GPPDQAFI TQN SK+L+ K    +LKGEEW++ +GALA+LLLLDQFPRT
Sbjct:    1 MATGEGA-GLGEILNLKTAQDVVDFWFGTDLARLASDKEYGQSFGAKWFGAGPPDQAFIGTQNASKELVAKAGSGELKGEEWETSKGALARLLLLDQFPRT 100
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BLAST of mRNA_H-canaliculatus_F_contig1410.3247.1 vs. uniprot
Match: A0A835Z6H1_9STRA (Putative transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 8.010e-10
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0 
Query:  123 QEVVKFWFGPDPARLTTDGEYGQSFAAK-WFGMGPPDQAFIDTQNMSKDLIQKTADDDLKGEEWDSPQGALAKLLLLDQFPRTA 205
            Q+V+ FWFG D A LT  G   + +  K WFG G  D+ F   Q  +KDLIQ+ A     G EWD P+  LA++++LDQF RTA
Sbjct:   14 QDVLTFWFGDDAAALTA-GSPARGYRFKLWFG-GANDERFDALQVEAKDLIQQAA---AGGPEWDGPRNTLARIIVLDQFSRTA 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1410.3247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KSE8_9PHAE8.660e-4248.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVL0_ECTSI3.850e-3667.33Putative transmembrane protein n=1 Tax=Ectocarpus ... [more]
A0A835Z6H1_9STRA8.010e-1046.43Putative transmembrane protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010323Protein of unknown function DUF924PFAMPF06041DUF924coord: 125..204
e-value: 1.0E-6
score: 29.0
NoneNo IPR availableGENE3D1.20.58.320coord: 117..206
e-value: 1.3E-6
score: 30.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..207
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.525
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 120..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1410contigH-canaliculatus_F_contig1410:296..7030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1410.3247.1mRNA_H-canaliculatus_F_contig1410.3247.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1410 2..7030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1410.3247.1 ID=prot_H-canaliculatus_F_contig1410.3247.1|Name=mRNA_H-canaliculatus_F_contig1410.3247.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=208bp
MQHTPTPRLCMNLRPLLLPAAASLTRVLVVQGFSLASGTARGARQLSSYS
RSGTAAVPCPTALGLPSRPSSVLPHTKPTSATAANKALLLSYRVRGGSKL
SRNMATTSGAVESGGISDLKTPQEVVKFWFGPDPARLTTDGEYGQSFAAK
WFGMGPPDQAFIDTQNMSKDLIQKTADDDLKGEEWDSPQGALAKLLLLDQ
FPRTAMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR010323DUF924