prot_H-canaliculatus_F_contig141.3241.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig141.3241.1
Unique Nameprot_H-canaliculatus_F_contig141.3241.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length433
Homology
BLAST of mRNA_H-canaliculatus_F_contig141.3241.1 vs. uniprot
Match: D8LQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ90_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 4.580e-82
Identity = 211/404 (52.23%), Postives = 249/404 (61.63%), Query Frame = 0
Query:    1 RTGSAWLAVGLSVISLVYACWVGASVMVMGAEELKRGGVRFRKLVASWHALLILAALTSTLFRLQQQRQLQRWEGAVTASAMVRGGLGSALLALAAWQLGKLSAREVEHSVRYGLVVTLHEELRKDPDHQ-LSAASLLKLAAGRWLVEHWSQPPTFSAPELREMLVRAVSSVALERRLFGGSAGEWDG----------GNGGGGALPSVGSKNEGEDPSAYPASSTLPAVERALMEWLQGRVREPPLTTLEFASETVKPADAT-GWTRVSLEAAILLRGCPSLCMTSAVVFFGALTGAPWGRCWTWTGWAFLLPLVGPAVVEAWGLQVLRKELRRKRSDKXXXXXXXXXXXXXXXXXXXXXXXERQADGLSLFLEEVNPPLANVWRNLLRAAGQLREKNLPASG 392
            R+ SAWLAVGL + S VYAC VGASV+V G  ELK G  +FR LVASWHALL+L A+ +    L QQ+    W+  V     VR GLGS LL+LAAWQLG LSAR VE +VRYGLV T+ + L +  +H+ LS  SLL+LAAGRWLVE+WSQPPTFSAPE+REMLV+AVSS+A ER L  GS     G          G   G    +       + P    A S    VE AL  WL+GR  EPP+  L    E   PA A+ GW  VS EA +L R CP+LC +  ++    + GAPW        WAFL+ L GPA VE W L+VLRKEL RK+ D  XXXXXXXXXXXXXXXXX        AD LSL L E NPPL NVW+N +R A +L E   PA G
Sbjct:  114 RSCSAWLAVGLFIASTVYACLVGASVVVAGVAELKGGEAKFRCLVASWHALLLLTAVGA----LSQQQ----WDRTV-----VRQGLGSVLLSLAAWQLGGLSARRVEGAVRYGLVATVQKALGEASNHEKLSPESLLELAAGRWLVEYWSQPPTFSAPEVREMLVQAVSSIARERLL--GSTSRRGGXXXXXXXXXRGRSSGDIQDTFVKDGVRDSPELSEAPSPAGGVE-ALTGWLEGRGSEPPVPKLWHPVEN--PASASPGWVLVSSEAPLLWRACPTLCASVFLLLRSLVGGAPWME------WAFLVALAGPAAVEVWRLRVLRKELTRKKRDHRXXXXXXXXXXXXXXXXXA-------ADRLSLLLRESNPPLENVWKNAVRLAEKLGED--PAGG 484          
BLAST of mRNA_H-canaliculatus_F_contig141.3241.1 vs. uniprot
Match: A0A6H5JPX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPX7_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 5.760e-60
Identity = 162/379 (42.74%), Postives = 203/379 (53.56%), Query Frame = 0
Query:    1 RTGSAWLAVGLSVISLVYACWVGASVMVMGAEELKRGGVRFRKLVASWHALLILAALTSTLFRLQQQRQLQRWEGAVTASAMVRGGLGSALLALAAWQLGKLSAREVEHSVRYGLVVTLHEELRKDPDHQLSAA------------------------------------------------SLLKLAAGRWLVEHWSQPPTFSAPELREMLVRAVSSVALERRLFGGSAGEWDG----------GNGGGGALPSVGSKNEGEDPSAYPASSTLPAVERALMEWLQGRVREPPLTTLEFASETVKPADATGWTRVSLEAAILLRGCPSLCMTSAVVFFGALTGAPWGRCWTWTGWAFLLPLVGPAVVEAWGLQVLRKEL 321
            R+ SAWLAVGL + S VYAC VGASV++ G  ELK G  +FR LVASWHALL+L A+ +    L QQ+    W+  V     VR GLGS LL+LAAWQLG LSAR VE +VRY LVVT+ + L +  +H++ AA                                                SLL+LAAGRWL+E+WSQPPTFSA ELREMLV+AVSS+  ER L G ++G              G   G    +       + P    A S    VE AL  WL+GR  EPP+       ET+  A + GW  VS EA +LLR CP+ C ++ ++    + GA      +W  WAFLL L GPA VE W L+VLRKE+
Sbjct:  112 RSCSAWLAVGLFIASTVYACLVGASVVLAGVAELKGGEGKFRCLVASWHALLLLTAVGT----LSQQQ----WDRTV-----VRQGLGSMLLSLAAWQLGGLSARRVEGAVRYSLVVTVQKALGEASNHEVIAALEVVCLSFSLPALTAEPPYPWPNHPPSGQPRPKHATHKHPCIEKFSPESLLELAAGRWLIEYWSQPPTFSALELREMLVQAVSSITRER-LVGSTSGRGXXXXXXXXXXXRGRSSGDMHDTFVKDGVRDSPELTEAPSPGRGVE-ALTGWLEGRGSEPPVPRFWRPVETLASA-SPGWVLVSSEAPLLLRACPTSCASAFLLLRSLVGGA------SWMEWAFLLALAGPAAVELWRLRVLRKEV 468          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig141.3241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ90_ECTSI4.580e-8252.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPX7_9PHAE5.760e-6042.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..317
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..293
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 318..433
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..64
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..19
score: 0.516
NoneNo IPR availableTMHMMTMhelixcoord: 262..284
NoneNo IPR availableTMHMMTMhelixcoord: 294..316
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 44..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig141contigH-canaliculatus_F_contig141:15257..18784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig141.3241.1mRNA_H-canaliculatus_F_contig141.3241.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig141 15257..18784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig141.3241.1 ID=prot_H-canaliculatus_F_contig141.3241.1|Name=mRNA_H-canaliculatus_F_contig141.3241.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=433bp
RTGSAWLAVGLSVISLVYACWVGASVMVMGAEELKRGGVRFRKLVASWHA
LLILAALTSTLFRLQQQRQLQRWEGAVTASAMVRGGLGSALLALAAWQLG
KLSAREVEHSVRYGLVVTLHEELRKDPDHQLSAASLLKLAAGRWLVEHWS
QPPTFSAPELREMLVRAVSSVALERRLFGGSAGEWDGGNGGGGALPSVGS
KNEGEDPSAYPASSTLPAVERALMEWLQGRVREPPLTTLEFASETVKPAD
ATGWTRVSLEAAILLRGCPSLCMTSAVVFFGALTGAPWGRCWTWTGWAFL
LPLVGPAVVEAWGLQVLRKELRRKRSDKPPQAPPPQAPPPPPPPPAAAAA
AERQADGLSLFLEEVNPPLANVWRNLLRAAGQLREKNLPASGAGASGGGP
AEGVTRRGVSLDGGGGWDGAAGREASRTGSGGG
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