prot_H-canaliculatus_F_contig141.3239.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig141.3239.1
Unique Nameprot_H-canaliculatus_F_contig141.3239.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length190
Homology
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BLAST of mRNA_H-canaliculatus_F_contig141.3239.1 vs. uniprot
Match: D7FGZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.850e-10
Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 0 
Query:   28 KW-CSNGDESETTVFSDPSGDSSFTGGAITNVEAAAHTNTTALEFLELVFIGGSSPDATWTEVYSEEGPFG 97
            +W CSNGDES T+  + P G  SFT GAIT +EA AHTNTT LEFL L++IGG        +  S EGPFG
Sbjct:    2 RWRCSNGDESPTSDNTSPDGIISFTDGAITAIEATAHTNTTTLEFLGLMYIGGFYFSE---DTISTEGPFG 69
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig141.3239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGZ8_ECTSI2.850e-1056.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..135
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig141contigH-canaliculatus_F_contig141:3662..10982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig141.3239.1mRNA_H-canaliculatus_F_contig141.3239.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig141 3238..10982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig141.3239.1 ID=prot_H-canaliculatus_F_contig141.3239.1|Name=mRNA_H-canaliculatus_F_contig141.3239.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=190bp
RHTLCGKGADTRGLFIPSLDQGPSIHNKWCSNGDESETTVFSDPSGDSSF
TGGAITNVEAAAHTNTTALEFLELVFIGGSSPDATWTEVYSEEGPFGRAC
CVLVPSAFVGGGRSAPYDIVLARFPFLPSCPRVVCLWVYLGAQLAVFWVV
LCSCSLPCFFGVFFLYRCPRICAACDRDGPGGHTATPYR*
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