mRNA_H-canaliculatus_F_contig14085.3229.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: D7G0G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G9_ECTSI) HSP 1 Score: 181 bits (459), Expect = 5.140e-53 Identity = 120/208 (57.69%), Postives = 135/208 (64.90%), Query Frame = 1
Query: 1 RDLVSSSSATDADEDSAAGAMLASAYMTQTPEKRPPAPPAAADAPPASAXXXXXXXXXXEPAGGVISAATPAPAPGSPELTLYGNLRDEAATSCLLSDLAAIFTDAAVANGKGVAVASDVDEALCSKGGHGXXXXXXXXXXDHGPADAGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCGMR 624
R+L+ SSA+ DE SAAGAMLASA+M+QTPEKR A++++ A A P S+ + P SPELTLYGN +D A T S DAAV+ G V V +A CSKG H DHGPADAGAYVTLAVDFLHN+IDGIGIGAAYAVGGDAVGH TAALKLVHEVQHEIGDV TLVQCGMR
Sbjct: 71 RELLEYSSASVEDEGSAAGAMLASAHMSQTPEKR--VSTASSESCRAGAPEVVELFPAVAP-----SSDSAVAVPSSPELTLYGNPKDAATTGQEGSP-----ADAAVSKGHAVLVRGGGGDAACSKGDH------HQDHHDHGPADAGAYVTLAVDFLHNLIDGIGIGAAYAVGGDAVGHATAALKLVHEVQHEIGDVATLVQCGMR 260
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: A0A6H5KUR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR9_9PHAE) HSP 1 Score: 167 bits (424), Expect = 9.500e-46 Identity = 118/207 (57.00%), Postives = 129/207 (62.32%), Query Frame = 1
Query: 1 RDLVSSSSATDADEDSAAGAMLASAYMTQTPEKRPPAPPAAADAPPASAXXXXXXXXXXEPAGGVISAATPAPAPGSPELTLYGNLRDEAATSCLLSDLAAIFTDAAVANGKGVAVASDVDEALCSKGGHGXXXXXXXXXXDHGPADAGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCGM 621
R+L+ SSA+ DE SAA AMLASA ++QTPEKR + A + E A SA AP SPELTLYGN +D AAT S DAAV+ G V V +A C KG H DHGPADAGAYVTLAVDFLHN+IDGIGIGAAYAVGGDAVGH TAALKLVHEVQHEIGDV TLVQCGM
Sbjct: 229 RELLEYSSASVEDEGSAAEAMLASACISQTPEKRV----STASSESCRPGAPEVAELFPEVASSSDSAVA---APSSPELTLYGNPKD-AATGQEESP-----ADAAVSKGHAVLVRGGRGDAACIKGDH------HQYHHDHGPADAGAYVTLAVDFLHNLIDGIGIGAAYAVGGDAVGHATAALKLVHEVQHEIGDVATLVQCGM 416
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: A0A7S2CHD3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHD3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.010e-8 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 439 DAGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCGMRCAE 633
DAG Y+ LA D LHN DGI IGA++ VGG +G T LVHE+ HEIGD L+Q G + A+
Sbjct: 152 DAGGYLNLAADSLHNFTDGIAIGASF-VGGKNMGIATTLSVLVHELPHEIGDFAILIQNGAKPAQ 215
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: A0A183IEA7_9BILA (Uncharacterized protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IEA7_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 3.050e-7 Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 451 YVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
Y+ LA DFLHN+ DG+ IGA++ + G+ VG T L+HEV HEIGD L+Q G
Sbjct: 223 YLNLAADFLHNLTDGLAIGASF-LAGETVGVVTTLTVLLHEVPHEIGDFAVLIQSG 277
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: A0A2H2I0Z0_CAEJA (Uncharacterized protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2I0Z0_CAEJA) HSP 1 Score: 60.5 bits (145), Expect = 3.270e-7 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 442 AGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
A AY+ L DF+HNV DG+ IGA+++ G A+G T L+HE+ HE+GD LVQ G
Sbjct: 253 ASAYLNLVADFVHNVTDGLAIGASFSA-GSALGWVTTLTVLLHELPHEVGDFAILVQSG 310
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: ZPT71_CAEEL (Zinc transporter zipt-7.1 n=1 Tax=Caenorhabditis elegans TaxID=6239 RepID=ZPT71_CAEEL) HSP 1 Score: 58.9 bits (141), Expect = 1.070e-6 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 442 AGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
A AY+ L DF+HNV DG+ IGA+++ G+ +G T L+HE+ HE+GD LVQ G
Sbjct: 235 ASAYLNLVADFVHNVTDGLAIGASFSA-GNTLGWITTLTVLLHELPHEVGDFAILVQSG 292
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: A0A132A5N3_SARSC (Zinc transporter SLC39A7-like protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A132A5N3_SARSC) HSP 1 Score: 57.8 bits (138), Expect = 1.110e-6 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 454 VTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
+ L DFLHN+ DG+ IGA +A GG ++G TA L+HE+ HEIGD L+Q G
Sbjct: 76 LNLIADFLHNLTDGLAIGATFAAGG-SMGAITAFTILMHEIPHEIGDYAMLIQAG 129
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: ZPT71_CAEBR (Zinc transporter zipt-7.1 n=2 Tax=Caenorhabditis TaxID=6237 RepID=ZPT71_CAEBR) HSP 1 Score: 57.8 bits (138), Expect = 2.630e-6 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 442 AGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
A AY+ L DF+HN+ DG+ IGA+++ G +G T L+HE+ HE+GD LVQ G
Sbjct: 235 ASAYLNLVADFVHNMTDGLAIGASFSA-GSTLGWVTTLTVLLHELPHEVGDFAILVQSG 292
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: A0A6H5KPX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX6_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 3.310e-6 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 454 VTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
+ LA D LHN+ DGI IGA++A G +G +TA L+HE+ HEIGD LVQ G
Sbjct: 89 LNLAADALHNLSDGIAIGASFA-SGSGLGFSTALATLLHELPHEIGDFAVLVQSG 142
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Match: E3MJZ0_CAERE (CRE-HKE-4.1 protein n=4 Tax=Caenorhabditis TaxID=6237 RepID=E3MJZ0_CAERE) HSP 1 Score: 57.4 bits (137), Expect = 3.530e-6 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 442 AGAYVTLAVDFLHNVIDGIGIGAAYAVGGDAVGHTTAALKLVHEVQHEIGDVTTLVQCG 618
A AY+ L DF+HN+ DG+ IGA+++ G +G T L+HE+ HE+GD LVQ G
Sbjct: 229 ASAYLNLVADFVHNLTDGLAIGASFSA-GSTLGWITTLTVLLHELPHEVGDFAILVQSG 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14085.3229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14085.3229.1 >prot_H-canaliculatus_F_contig14085.3229.1 ID=prot_H-canaliculatus_F_contig14085.3229.1|Name=mRNA_H-canaliculatus_F_contig14085.3229.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=215bp RDLVSSSSATDADEDSAAGAMLASAYMTQTPEKRPPAPPAAADAPPASAPback to top mRNA from alignment at H-canaliculatus_F_contig14085:105..2040+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14085.3229.1 ID=mRNA_H-canaliculatus_F_contig14085.3229.1|Name=mRNA_H-canaliculatus_F_contig14085.3229.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1936bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14085:105..2040+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14085:105..2040+ >mRNA_H-canaliculatus_F_contig14085.3229.1 ID=mRNA_H-canaliculatus_F_contig14085.3229.1|Name=mRNA_H-canaliculatus_F_contig14085.3229.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1290bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14085:105..2040+ (Hapterophycus canaliculatus Oshoro5f female)back to top |