mRNA_H-canaliculatus_F_contig1407.3219.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1407.3219.1
Unique NamemRNA_H-canaliculatus_F_contig1407.3219.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A6H5L249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L249_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 1.180e-135
Identity = 294/554 (53.07%), Postives = 337/554 (60.83%), Query Frame = 1
Query:  253 SQILIEQAATTFDVYPAVITTKYYNAEVSFWRQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXX-----VRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGMEFRTDNRPSLMAAAXXXXXXXXXXXXXXXIGGVGSVSR--------SSSGGEXGTAT-LSPSVG-DGEEEVSEYLSGFVNGDDGDAEYAGYGALDSGDXXXXXXXXXXXXXXXXXXGQNGGGTGQEDXXEGRDEDEVGVDATHIELQARWEQPDLSSPS-PGAGRDASGVAAPQLAEDVAASRQDRSLETANPSSEPVGGTAPVHEGDGGKIAADEENTTGLVAKTGXXXXXXXSASVRHEGGAELPGNFSXXXXXXXXXXTEHDCCREGADVMGGRGKGAGKAESSTKSSEERMLEAVGSMFGGLGGESEGDEMELLMGEVRKARELGDSVPDDERRARAENVAMKLAALLGDL 1866
            SQ+L+EQA   FDV+PA ITTKYYNA++SFWRQAQA+VP+LALRSAEQL GLEGIIVL DLRQES FD+A QWAA ++DR++CAFR+CVGSKLDLL ++  +G      AGFG   AET       G      XXXXXXX     +RERRRRCL WCLDHG EYVEADCRD   GGELREKEGVPR+VEALQSNVWT MEF + NRPSLMAA                 G VG V           SSGGE GTA  LS + G DG  EVSEYL GFV+ DD   +YAGYGALDSGD                  G   GG G     EG D   V VD +HIELQARWEQ D SS S P AG DA+  A   L  +    +  RS      ++ P   TAP H+G        ++N     +K G       SA+    GG   PG  S              C R GA   G   +G G  E+++K SEE +LEA GSM GG+GG+ EGDEME LMGEVRKARELG SV D+ERR+RA NVAM+LAALLGDL
Sbjct:   60 SQVLLEQANAKFDVFPASITTKYYNAQISFWRQAQAAVPILALRSAEQLEGLEGIIVLFDLRQESGFDEASQWAALMEDREECAFRVCVGSKLDLLPQDPGDG------AGFGTG-AETTLEPAESGLEGDAAXXXXXXXXXXEGLRERRRRCLGWCLDHGFEYVEADCRDSNTGGELREKEGVPRIVEALQSNVWTDMEFLSSNRPSLMAAVATAAVGGSRND-----GAVGDVXXXXXXXSVSESSGGEDGTAAALSSTAGADGGHEVSEYLHGFVDVDDEGGKYAGYGALDSGDEEEGGDGDGQVAGEWSRGGVEEGGAGA--PREGGDG--VVVDPSHIELQARWEQQDHSSSSLPDAG-DATNAATAALPSEQ---QSGRSCNDQQGAAAPERDTAPSHDG-------RKKNAEMFPSKPGD------SAANTPTGGTTAPGG-SCAGQSDGGNGEGGSCRRAGAAAAG---EGTGDGEAASKESEEYLLEAAGSMVGGIGGDLEGDEMEQLMGEVRKARELGGSVSDEERRSRAANVAMRLAALLGDL 576          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: D7FHG9_ECTSI (IRC6, uncharacterized protein interacting with AP adaptor complexes n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG9_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 3.160e-114
Identity = 283/527 (53.70%), Postives = 313/527 (59.39%), Query Frame = 1
Query:  334 VSFWRQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGMEFRTDNRPSLMAA----AXXXXXXXXXXXXXXXIGGVGSVSRSSSGGEXGTATLS-PSVGDGEEEVSEYLSGFVNGDDGDAEYAGYGALDSGDXXXXXXXXXXXXXXXXXXGQNG--------GGTGQEDXXEGRDEDEVGVDATHIELQARWEQPD-LSSPSPGAGRDASGVAAPQLA---EDVAASRQDRSLETANPSSEPVGGTAPVHEGDGGKIAADEENTTGLVAKTGXXXXXXXSASVRHEGGAELPGNFSXXXXXXXXXXTEHDCCREGADVMGGRGKGAGKAESSTKSSEERMLEAVGSMFGGLGGESEGDEMELLMGEVRKARELGDSVPDDERRARAENVAMKLAALLGD 1863
            +SFWRQAQA+VPVLALRSAEQL GLEGIIV+ DLRQESS D+  QWAA V+DR++CAFR+CVGSKLDLL E+  +G       GFG   AETA      G             ++ERR RCL WCLDHG EYVEADCRD   GGELREKEGVPR+VEALQSNVWTGMEF + NRPSLMAA    A               +GG GSVS SS    X  A LS      G  E SEYL GFV+ DD   EYAGYGALDSGD       XXXXXXXXXXX            GG G     EGR    V VD +HIELQARWEQ D  SS SPGAG DA+  AA   A   E+ AA    RS      ++ P   TAP H  DGGK      N   L +K G       S +     G   PG         XXXX     CR         G G G+A S  K SEE +LEA GSM GG+GG+ EGDEME LMGEVRKARELG SV D+ERR+RA NVAM+LAALLGD
Sbjct:    7 ISFWRQAQAAVPVLALRSAEQLEGLEGIIVVFDLRQESSLDEVAQWAALVEDREECAFRVCVGSKLDLLPEDPGDG------TGFGTG-AETAPEPAESGLEGGDAAAAEG--LQERRSRCLGWCLDHGFEYVEADCRDSYTGGELREKEGVPRIVEALQSNVWTGMEFLSSNRPSLMAAVATAAAGGSRNDGAAGDGGNVGGTGSVSGSSXXXXXXXAALSFAXXXXGGHEASEYLDGFVDVDDEGGEYAGYGALDSGDEEEGGDGXXXXXXXXXXXXXXXXXXXXVEEGGAGA--PREGRGG--VVVDPSHIELQARWEQQDHSSSSSPGAG-DATNAAAADTALPSEEQAA----RSCNDQQGAAAPGRDTAPSH--DGGK-----NNAEILPSKPGD------SVASTPADGTTAPGG--SCAGQSXXXXXXXXSCRGAXXXXXXEGTGDGEAAS--KESEEYLLEAAGSMVGGIGGDLEGDEMERLMGEVRKARELGGSVSDEERRSRAANVAMRLAALLGD 498          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A835Z725_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z725_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.200e-21
Identity = 67/197 (34.01%), Postives = 98/197 (49.75%), Query Frame = 1
Query:  259 ILIEQAATTFDVYPAVITTKYYNAEVSFWRQAQA-SVPVL----ALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGM 834
            +L+E A   F  +   + TKYY+ ++ FW Q +  S+  +    A+ +A    G+EGII + D+ Q+ +F+   +W  F D+RD  A R+ V SK   L +                 +A+   A+G                +  RR   + WCLDHG EY+EA+C     GG+ REKEGVPRVVEALQS  W  +
Sbjct:   22 VLLEAAGARFAQHAWPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEHGVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHLRK---------------LQMADLF-ADG--------------DEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 188          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A7S0VVT7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VVT7_9CRYP)

HSP 1 Score: 65.9 bits (159), Expect = 5.460e-9
Identity = 48/179 (26.82%), Postives = 78/179 (43.58%), Query Frame = 1
Query:  307 ITTKYYNAEVSFWRQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGMEFR 843
            + TKY++A V       A+ P   +         EG++++ D+  ++SF+   +W AF+D+ D  A  +CV +K D+                                             + ERR   + WCLD GLE VE    + +  GE R+ EG+ RV+EAL S+ W+GM+ +
Sbjct:    6 VRTKYFSAAVV---PKVAASPNHLVADDVDFGDCEGLVLVFDMCDDTSFERLKEWDAFLDEVDP-AVALCVANKADVAAT---------------------------------------LPGMDERRDTWISWCLDKGLELVECSALNDEVRGE-RDAEGLERVIEALGSHTWSGMKVK 140          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A1S3Z9U5_TOBAC (uncharacterized protein LOC107784559 n=8 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Z9U5_TOBAC)

HSP 1 Score: 69.7 bits (169), Expect = 9.810e-9
Identity = 62/207 (29.95%), Postives = 92/207 (44.44%), Query Frame = 1
Query:  295 YPAVITTKYYNAEVSFW-RQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRI--CVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRG--------GXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELR---EKEGVPRVVEALQSNVWTGMEFRTDNR---PSL 864
            YP  I TKYYNA+VS W         + AL + + L  L   +++ D+   SSF     W   V   D   F I  C+G+KLDLL   +           + + L ++A + GR                         E ++ CL+WCL+H +EYVEA   +V     L    + +GV R+  AL + +W GM  ++ +R   PSL
Sbjct:   58 YPWTINTKYYNADVSIWVAHLHEDFSIGALPAFDHLIAL---VLVFDISDLSSFVALKDW---VSRTDILTFEILLCIGNKLDLLPGHSAH-------VEYRRRLLKSADSSGRPYIELDSGISETEGSSLLGDDDTSLEYKKSCLDWCLEHNIEYVEACASNVDFDKCLSVDGDSQGVERLFGALSAYMWPGMILKSGDRITEPSL 251          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: UPI001CB9375C (uncharacterized protein LOC122599526 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9375C)

HSP 1 Score: 67.8 bits (164), Expect = 3.810e-8
Identity = 59/214 (27.57%), Postives = 94/214 (43.93%), Query Frame = 1
Query:  295 YPAVITTKYYNAEVSFWR-QAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDL----------------LTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELR----EKEGVPRVVEALQSNVWTGMEFR---TDNRPSL 864
            Y   I TKYY A++S W         +  +   +Q+A L   +++ DL   SSF + ++W +  D R+     +C+G+K DL                L E AE G +       G SL     +                  + E +R C+EWCL+H +EY+EA C    R  +      + +GV R++ AL +++W GM  +   T  +PSL
Sbjct:   58 YGWTINTKYYTADISMWMAHLSKEFSITGMPMFDQVAAL---VMVFDLNNLSSFSELVKWVSHNDIRN-FDILLCIGNKADLVPGHPAHVEYRRRLLNLDESAESGFSEI----EGSSLLGDEESS-----------------LLEIKRSCMEWCLEHNIEYIEA-CASNPRFDKCLSVDGDSQGVERLLGALSAHMWPGMVLKSGDTIKQPSL 245          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A3N7G3N3_POPTR (Uncharacterized protein n=8 Tax=Saliceae TaxID=238069 RepID=A0A3N7G3N3_POPTR)

HSP 1 Score: 66.6 bits (161), Expect = 9.700e-8
Identity = 57/196 (29.08%), Postives = 88/196 (44.90%), Query Frame = 1
Query:  307 ITTKYYNAEVSFW-RQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLT---------EEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELR---EKEGVPRVVEALQSNVWTGMEFRTDNR 855
            I TKYY A+VS W         + +L    +LA L   +++ DL   SSF     W A  +D  +    +C+G+K+D +           +  + G S         L E   +E  G               RE +R C+EWC DHG+EY+EA   +V     L    + +GV R+  AL +++W GM  ++DN+
Sbjct:   58 IDTKYYTADVSLWIAHLHEGFSIGSLPIYNKLAAL---VMVFDLSDLSSFVALKDWVAG-NDISKFEILLCIGNKVDRIPGHPVHAEYRRQLRKIGESGSFDDLNIELDEFGISEIEGSSLLGDEEEPS----REIKRSCIEWCTDHGIEYIEACASNVDFDKCLLVDGDSQGVERLYGALSAHMWPGMILKSDNK 245          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A251TPJ0_HELAN (Putative GTP binding protein n=4 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TPJ0_HELAN)

HSP 1 Score: 63.9 bits (154), Expect = 6.080e-7
Identity = 54/212 (25.47%), Postives = 93/212 (43.87%), Query Frame = 1
Query:  295 YPAVITTKYYNAEVSFWRQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLT---------------EEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELR----EKEGVPRVVEALQSNVWTGMEFR---TDNRPSL 864
            Y   I TKYY A+VS W     +    ++     L  +  ++++ DL   SSF +  +W +  +D       +C+G+K DL+                +E+ E G           ++ET  +   G                + +R C+EWCL+H +EY+EA C    R  +      + +GV R++ AL +++W GM  +   T N+P+L
Sbjct:   50 YRWTINTKYYTADVSMWMAHLFNE--FSITGTPMLNQVAALVMVFDLNNMSSFSELKKWVS-CNDIQNFDILLCIGNKADLVPGHSAHIEYRRHLLNLDESSECG-----------ISETEGSSLLG----------DEESSTDVKRSCMEWCLEHNIEYIEA-CASNPRFDKCLSVDGDSQGVERLLGALSAHMWPGMVLKSGDTINQPTL 236          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A2J6L613_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6L613_LACSA)

HSP 1 Score: 63.9 bits (154), Expect = 6.440e-7
Identity = 54/210 (25.71%), Postives = 92/210 (43.81%), Query Frame = 1
Query:  295 YPAVITTKYYNAEVSFWRQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDL--------------LTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELR---EKEGVPRVVEALQSNVWTGMEFR---TDNRPSL 864
            Y   I TKYY A+VS W     +    ++        +  ++++ DL  +SSF +  +W +  +D  +    +C+G+K DL              L + +E G         G SL E   +                    E ++ C+EWCL+H +EY+EA   + Q    L    + +GV R++ AL +++W GM  +   T ++PSL
Sbjct:   54 YGWTINTKYYTADVSMWMAHLFNE--FSITGVPMFDQITALVMVFDLNNQSSFSELKKWVSR-NDIGKFDILLCIGNKADLVVGHSAHIEYRRHVLNQSSEYGIEET----EGSSLLEDESSS---------------SSSLEIKKSCMEWCLEHNIEYIEACASNPQFDKCLSVDGDSQGVERLLGALSAHMWPGMILKSGQTISQPSL 241          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A5A7QW10_STRAF (CM0216.310.nc protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QW10_STRAF)

HSP 1 Score: 63.2 bits (152), Expect = 1.080e-6
Identity = 56/195 (28.72%), Postives = 90/195 (46.15%), Query Frame = 1
Query:  307 ITTKYYNAEVSFWRQAQASVPVLALRSAEQLAGLEGIIVLIDLRQESSFDDAMQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSL---AETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELR---EKEGVPRVVEALQSNVWTGMEFRTDNR---PSL 864
            I TKYY+A+VS W    +    L++ S+  +     ++++ DL   SS     +W A  D + +    +C+G+K+DL+ +               +SL    E   +E  G                E +R CLEWCLDH +EYVEA   +      L    + +GV R+  AL +++W GM  ++ +R   PSL
Sbjct:   35 INTKYYSADVSVWMAHLSDT--LSVASSPIVDRAVALVMVFDLTDLSSLAALQEWVARTDIQ-RFDILLCIGNKVDLVPDHPAHMEYKRRFMRQEESLLGFTEYGISETEGSSLLREEETNS-----ELKRSCLEWCLDHNIEYVEACASNADFDKCLSVEGDSQGVERLYGALSAHMWPGMLLKSGDRINEPSL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L249_9PHAE1.180e-13553.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG9_ECTSI3.160e-11453.70IRC6, uncharacterized protein interacting with AP ... [more]
A0A835Z725_9STRA1.200e-2134.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0VVT7_9CRYP5.460e-926.82Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1S3Z9U5_TOBAC9.810e-929.95uncharacterized protein LOC107784559 n=8 Tax=Nicot... [more]
UPI001CB9375C3.810e-827.57uncharacterized protein LOC122599526 n=1 Tax=Erige... [more]
A0A3N7G3N3_POPTR9.700e-829.08Uncharacterized protein n=8 Tax=Saliceae TaxID=238... [more]
A0A251TPJ0_HELAN6.080e-725.47Putative GTP binding protein n=4 Tax=Helianthus an... [more]
A0A2J6L613_LACSA6.440e-725.71Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A5A7QW10_STRAF1.080e-628.72CM0216.310.nc protein n=1 Tax=Striga asiatica TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1407contigH-canaliculatus_F_contig1407:13801..21676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIRC6, uncharacterised protein interacting with AP adaptor complexes
Ec32 orthologEc-25_002450.1
Exons9
Model size2702
Cds size1434
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929157.736285-UTR-H-canaliculatus_F_contig1407:13800..146061622929157.736285-UTR-H-canaliculatus_F_contig1407:13800..14606Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 13801..14606 -
1696845698.6718268-UTR-H-canaliculatus_F_contig1407:13800..146061696845698.6718268-UTR-H-canaliculatus_F_contig1407:13800..14606Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 13801..14606 -
1622929157.8553069-UTR-H-canaliculatus_F_contig1407:19209..192301622929157.8553069-UTR-H-canaliculatus_F_contig1407:19209..19230Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 19210..19230 -
1696845698.7471683-UTR-H-canaliculatus_F_contig1407:19209..192301696845698.7471683-UTR-H-canaliculatus_F_contig1407:19209..19230Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 19210..19230 -
1622929157.8697534-UTR-H-canaliculatus_F_contig1407:19916..200241622929157.8697534-UTR-H-canaliculatus_F_contig1407:19916..20024Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 19917..20024 -
1696845698.75628-UTR-H-canaliculatus_F_contig1407:19916..200241696845698.75628-UTR-H-canaliculatus_F_contig1407:19916..20024Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 19917..20024 -
1622929157.8850765-UTR-H-canaliculatus_F_contig1407:20798..210431622929157.8850765-UTR-H-canaliculatus_F_contig1407:20798..21043Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 20799..21043 -
1696845698.765545-UTR-H-canaliculatus_F_contig1407:20798..210431696845698.765545-UTR-H-canaliculatus_F_contig1407:20798..21043Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 20799..21043 -
1622929157.9010434-UTR-H-canaliculatus_F_contig1407:21588..216761622929157.9010434-UTR-H-canaliculatus_F_contig1407:21588..21676Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 21589..21676 -
1696845698.7825327-UTR-H-canaliculatus_F_contig1407:21588..216761696845698.7825327-UTR-H-canaliculatus_F_contig1407:21588..21676Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1407 21589..21676 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929157.7503757-CDS-H-canaliculatus_F_contig1407:14606..147591622929157.7503757-CDS-H-canaliculatus_F_contig1407:14606..14759Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 14607..14759 -
1696845698.6816287-CDS-H-canaliculatus_F_contig1407:14606..147591696845698.6816287-CDS-H-canaliculatus_F_contig1407:14606..14759Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 14607..14759 -
1622929157.7658613-CDS-H-canaliculatus_F_contig1407:15897..164011622929157.7658613-CDS-H-canaliculatus_F_contig1407:15897..16401Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 15898..16401 -
1696845698.695511-CDS-H-canaliculatus_F_contig1407:15897..164011696845698.695511-CDS-H-canaliculatus_F_contig1407:15897..16401Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 15898..16401 -
1622929157.7775874-CDS-H-canaliculatus_F_contig1407:17010..172321622929157.7775874-CDS-H-canaliculatus_F_contig1407:17010..17232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 17011..17232 -
1696845698.704113-CDS-H-canaliculatus_F_contig1407:17010..172321696845698.704113-CDS-H-canaliculatus_F_contig1407:17010..17232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 17011..17232 -
1622929157.7922087-CDS-H-canaliculatus_F_contig1407:17807..180641622929157.7922087-CDS-H-canaliculatus_F_contig1407:17807..18064Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 17808..18064 -
1696845698.7131617-CDS-H-canaliculatus_F_contig1407:17807..180641696845698.7131617-CDS-H-canaliculatus_F_contig1407:17807..18064Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 17808..18064 -
1622929157.8071582-CDS-H-canaliculatus_F_contig1407:18404..186361622929157.8071582-CDS-H-canaliculatus_F_contig1407:18404..18636Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 18405..18636 -
1696845698.721936-CDS-H-canaliculatus_F_contig1407:18404..186361696845698.721936-CDS-H-canaliculatus_F_contig1407:18404..18636Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 18405..18636 -
1622929157.81883-CDS-H-canaliculatus_F_contig1407:19143..192091622929157.81883-CDS-H-canaliculatus_F_contig1407:19143..19209Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 19144..19209 -
1696845698.7343733-CDS-H-canaliculatus_F_contig1407:19143..192091696845698.7343733-CDS-H-canaliculatus_F_contig1407:19143..19209Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1407 19144..19209 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1407.3219.1prot_H-canaliculatus_F_contig1407.3219.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1407 14607..19209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1407.3219.1

>prot_H-canaliculatus_F_contig1407.3219.1 ID=prot_H-canaliculatus_F_contig1407.3219.1|Name=mRNA_H-canaliculatus_F_contig1407.3219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=478bp
MQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETA
RAEGRGGGGEGAGGGNEGGGVRERRRRCLEWCLDHGLEYVEADCRDVQRG
GELREKEGVPRVVEALQSNVWTGMEFRTDNRPSLMAAAAAASGPPGGVGG
GGNIGGVGSVSRSSSGGEGGTATLSPSVGDGEEEVSEYLSGFVNGDDGDA
EYAGYGALDSGDDEEEEEEEEEEEEEKEEEGQNGGGTGQEDGGEGRDEDE
VGVDATHIELQARWEQPDLSSPSPGAGRDASGVAAPQLAEDVAASRQDRS
LETANPSSEPVGGTAPVHEGDGGKIAADEENTTGLVAKTGGGGAATESAS
VRHEGGAELPGNFSGGGGGGGGGGTEHDCCREGADVMGGRGKGAGKAESS
TKSSEERMLEAVGSMFGGLGGESEGDEMELLMGEVRKARELGDSVPDDER
RARAENVAMKLAALLGDLGEDSEDDER*
back to top

mRNA from alignment at H-canaliculatus_F_contig1407:13801..21676-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1407.3219.1 ID=mRNA_H-canaliculatus_F_contig1407.3219.1|Name=mRNA_H-canaliculatus_F_contig1407.3219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7876bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1407:13801..21676- (Hapterophycus canaliculatus Oshoro5f female)
GCGCGACTTCTGTATCGCCATCTCCAGATGGTGCCGAAGGAGACGGCCAT GATGCCCCGGAGCCTGAGCGGGCCATTGCAGCTGACAGGTGATGCCCGTA CTCGTGGTGTTGAGCTATCTTCTTCGAGGCGCTCGCTGCTGTGCTGGTTT CTTGGTGGTGATATTGGGTGGGTTGGCTCCCCTTCACTTTGCCATGCTGC CGACTGCTGCTTGTCGGTGAACAACTGCTCTTGGCTCTTGGTGATATCTA CGACGCAGGCCGAGTCCATGAGACCGCCGTTTGAAGCCTCATCGCTACAG ACGGGACAGGCATGCGCTCCTCTAGTGTTTTTCATGGATTGCGTCAATCG CACTTTATGGAAGTCGCACATACATCCCGGCGTCACGATGCCAGATAGCC GGTCGTGATCTTCGTCCGAGAATCCTAGGCAAAAACTCTATTTTCATAGA CACAGGTCATGGTCTTCAGTCCGCAGGTAAAGAACGCGATGCTTTCGCGA TTATATATCTGCCGGTGGCTGGAGTGCTGGACGGCTTACTATCGCGCGAA CCGTGCAGCCTCGCTCCTCTACTTGATACTTTCCGTGTTTGCAAGCCTTG AACACGTTCTTCGACATGGCGCGATTTCTACAGGAACAGTCGGAGAAGTC TCCTGGAGGGGCGCAGAGATCGACCTCTCGCCCTCGTCTGTCGACCAAAT GAAGACTGGAAGTACGTGCGGCTGCTGATCTGAACGCCCGCTGCCTCTCC CTCTGCCTTCTTGGTTATCTTGCCTGCGCACCGCCGGCCTCATCACCAGC CAAATCTTGATCGAGCAAGCAGCTACTACATTCGACGTCTACCCCGCCGT GATCACCACCAAGTACTACAACGCGGAGGTGGGAAGATCAGTGGCTGTTT GCGTGTCATTGCGGGCCGCAGTCGTGGTGCCGCACGGCATCGGATAGCCG GCATCGAACCTTCTTCGGTAGTTCCAGAAGACCCCTGGTTAGATTTTATA CAAAAGGGGGAAATGAAGGCGACCTCCAGTCCATCGTAGTCAGGATCGCG TGAGTGATACGAGATCCGAGAGAGCTGAGAAAAAGGGAGACCTTCAATCG AGGTCGAGATAGGGTGTTGTTGCCCAGTTTGTTGCCGCTTTGTGCCCTGT TCGCCCGCAACGAGGAGGGTCTCGGTTCGCCCCCTTGCAACTACTGCCTC CGCCAACTTAGTCCATCGATGCAAGCACTCCCTACCGAGTGCATCACACA AGCGTGCCCCAAGAAGCATGCGTGAACGTCCAACGACGCATCGATAGGCC TCGCCACCCCGTCACCCACGCCTGCGAAAACTTTCCCGGCTCTCAAGGTC GAGAGTATTCGTCGACTGATGAAAACCACGGCGTTGCTTAGGGTGGCGTT GGGCAAATACGCCGTGGGAACAGTAAATAACTGCTCTACTGGGGTAAAGA GTCCCCCCTTGCACCTAAGTTAGTACTCCGTACTTCGAAGTACCCCGTAC CTCGAAGTGTGAGTGCCGTTGGGTGTTTCTCCATATGGCGGAGTAGGCTT TTGCCCAAACGATCTTCAACGTTAGTTTCGTACGTTTTCGTACGCTATGT GGGTGACGACCGCCGCGAGTGAGTAACAATCGACTCCTGTCACCATGAGC AGGTTAGCTTTTGGAGGCAGGCGCAGGCAAGTGTGCCCGTTCTAGCGTTG CGATCGGCGGAGCAGCTCGCGGGGCTTGAGGGCATCATCGTCCTGATCGA CCTGAGACAGGTGCGAGGGTCAAGGGGTGGCGAGCGTAGCGTAGCCGTCA TGCCGTGCTGTGCTATGCCGCTTTGTGCTGTTCTGCGCAGCGCTACGGAG CACTGTACTGCGCTCTTGCTTTTGTAGGATACGCTGAGCTATTTGCGGTG TGTGACGTGCTGTGCGGCGGTGTGAACCAGCTGGTTTGAAGACATGCGTT GGCTAGGCTGTAGGAGGCCGCGCTCGGTCCAGGCCCTCGAACGGCGCGCT GAGTAGAAGGAGCAGCAGTTCTGTCCTAGCAGGGCGTCCCATGCGTGTAA CGTGGCTGGTGTGGGTGTCGAAGCGTGGTTGATTTGACCTACCTCGGGCA GCCACAAAACAAACGTTTTCAAGAGCGGGCTAAGCTCAAGGTGACAGCTT CAGAGTTGAGCGTAAAGGAGCAGCAGCAGCAGCAGCACCTTATCTCTCGA GGCATGAACGAGCGGAGTGCAGAGAAAACAGGTAAAAGTGTCTCAATTTT GCTTGAAAATGGCTGTACTGTACCCCCTACCCCCGGCACGCAAAGCTCTG ATTATTTCAGGTGTATGCACTATGCACTCACCGAACTCAATGTCTTGAGT ACTAGACTGTTAGATACCTTGCCTCATATTTGCCTGCCAAGACATCGTGT TAATTACTTGCTTCCGGCTGTGGTTTATTACTCCTTCGCTGCCCAGGAGT CTAGTTTCGACGACGCGATGCAATGGGCGGCTTTCGTGGACGATAGGGAT CAGTGCGCCTTTCGAATTTGCGTGGGAAGCAAGGTAAATCACGGACAAAT CGACCTCCAACAGCAACAGATTCTTGGAGCCTTCCTCGATGCAGTACTTC TTTCACTGTTCTTTGGGGGTAGGCTTCATGAGAACCATTTTCTTTTTTTG TTCGGGACTGAACTCGTCTGTTGCAATTGTCGTCGTCAAGGCCGCTTCCC TTGCTGCACTTGCCGCCGCTGCTGCCGCTGTGATGGCTCCCGTATTCGTC GCTGTGGATGACCATGACTTTGGTGTAAAGTTGGTTTTGTGTGTTTGCCG ATCCCATTGCGTTGCTTTGACGATGCCTCCTTCACCGTTGTCTCGGGGTT CCCTTCGGCTTTCAAGTGCAGGCCAGACTTCAGGGAGCACGCGTTCGCTA CCCACGGCGAGCAAACGTCCGCCGGAAGCAAAGACATGCCCTCCCCTACC CCCTTTCCCCGCCCAACACATTTTTGTTGTCGTCGCCGGCGTGTGCCGCC CGTGCTCGTGTTTGGACGTCGCGGGGTGCCATTTTCGCAGCTAGATTTGC TGACGGAGGAGGCAGAGGAAGGAGGAGCATCAGCCGGCGGGGCTGGCTTT GGCCAATCGCTGGCTGAGACCGCGAGAGCGGAGGGTCGGGGGGGGGGCGG TGAGGGCGCCGGGGGAGGGAACGAGGGCGGCGGTGTGCGGGAGAGACGGA GGCGCTGTCTGGAGTGGTGCCTCGATCACGGGTTGGAGTACGTTGAGGCC GACTGCAGGGATGTGCAACGAGGTGCATGGCTTGTCTGTGGTGTGCCGGA GGTGTGCCGGAGGTGTGCCGGGGGGTGCGTGCGTGTACGAGGGCTGGCAG CGCGATCGTCGATCGTCGCCAAGAACCGTGCGAGAGGGCGCGATCGTGGG AGGGTGTCTGTCAGGAGTAAGAACGGCGCTCTCCCCTTGACAGGAATAGG CGGTGAATGTGTCGAACGGCTGAGGCAAGCAAAATGCTAGTTGCCCCCCA ACCCCCCCTCCGTACTAAAATAGTTGCGTTGTCGATCGGATCCGCGACGG CGATGTCGTCACTGCTGACGTCCTGGGGCACTCGCTGCAAACACCCTCCC CCTCCCCCAAAGGCGGGGAGCTCAGAGAAAAGGAAGGCGTGCCTCGCGTG GTGGAGGCGCTCCAGTCCAACGTCTGGACGGGCATGGAGTTCCGCACCGA CAACCGGCCTTCTCTGATGGCGGCGGCAGCGGCAGCGTCGGGGCCCCCGG GGGGCGTCGGCGGCGGGGGTAACATCGGCGGCGTCGGGTCCGTGTCGAGA TCCAGCAGCGGCGGGGAGGGCGGGACCGCCACGTTGTCGCCCTCGGTCGG CGATGGGGAGGAGGAGGTGGTGAGTTAACTCCTCGCGTTGGCGTGTTTGG TACCCGAGCCGCCGTGCTTCCCGTATGGACGCCCGGGCGTCGGCGGCGGT GGCGCAAAGTGCGACCGGAGGTTACGCAAGCTTCCTACCGAATCGACCCT CCGCTCGGAATGCACTTGGCTGCATTGGACAGCATTTGCGACGCGCACGC TGATCGGCGTAACCCTGAGCGAAGTGAGTAGTACCTCGATTGCCTGTTGT ATTCCCGGGGCCCCGCCCGGGTAACGCCAGTAAGCCTTCGTCAGGAACAC ACATAGGCACCTTGTCGTAGCCCACCTTTCAATGGTGCAATGGTGCTGGT GTTGCGAGCAAGGTATAGCGGTGTTGCCTGGTGTTACTGTTTGCAAGAGT TTACAGGCGAATGAAAAAGGGAAAAAAAATGCAAACAGCAATAGCTTTCG GTTAAAGCGAAACCCGGCAGCTTAATTAAAAATTCGCCCCCCCCAAACCC CCCCCCTACCCTCTGCCGGCTGCCCGCCACCCCATCGGATCGTCAAACCT TCGATCGATCGGACACCCTACGGGCTCAATGGCGTATAATCCAGAGCGAG TACCTCAGCGGTTTCGTAAACGGGGACGATGGTGACGCAGAGTACGCTGG CTACGGCGCCCTTGATAGCGGCGATGACGAGGAGGAGGAGGAGGAGGAGG AGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGACAAAACGGGGGAGGGACG GGGCAGGAGGACGGAGGGGAGGGACGAGACGAAGATGAGGTCGGGGTCGA CGCCACTCATATCGAGGTACGTCGAACCGTTGTCTCTCCTACACGACATT CTGAACATTTCGCGGTGGATGGGAGTTGGCACCGGCTGCATCCACGGGGC CTCCGTCAGCGGCGGACGGAGTTTGACGCAAGCGCCGCCAGTTATCGTCC ACAACAAAGGGTGGGATTTCCGCGTTCGTCGGACTCGGCGAAGGAGGCGT TTGTTTCTCTGTCCGCGATGCGCATTTCCTCGGCTTCCGTTCGGATGCTC ATCCCGAAGGCTTAAGCTGTGGGCGGAAACGTCAGCCACCCTGTGTGTAG CTCATCTCAACTCGAGCCTTGAAAGGCCCCTGACGCATGGCGCGTGTGAA TGGAGTTCATCTGCTGCGGTGGGATCGCGTTTGCCCTAGGGCCGATGTCG TGATGAAAGCCGCTGATACGGCACGGCCTGTTTATTCTTTTCGCATGGTG CAGGGCGAGCGTGCGGCCATGCCCGTGAAGATGTATGCTTAAGATTTCCG ACTCCATGCGAGTCAAAATGGATGGTCGGCCGACAAAGACACCGCTTTTT GACAACGGGCACACACCCCGCCCCCCCTCCCATCAACACCTCGCGCCGAT CCTTCGTGTCGCCTGACTGGGACAGCTACAGGCACGGTGGGAGCAGCCAG ACCTCTCTTCGCCGTCTCCGGGTGCTGGCCGAGACGCGTCCGGCGTCGCC GCCCCACAACTGGCCGAAGATGTAGCAGCTAGCCGCCAGGACAGGAGTCT AGAAACGGCGAACCCGTCCTCCGAACCGGTCGGAGGAACGGCCCCCGTGC ACGAAGGCGACGGAGGAAAAATCGCCGCAGACGAGGAAAATACCACCGGG CTCGTAGCGAAAACCGGCGGAGGGGGCGCGGCGACGGAGAGTGCGAGCGT GCGACACGAAGGCGGCGCCGAACTTCCCGGGAATTTTTCTGGCGGCGGCG GCGGCGGCGGCGGCGGCGGTACCGAACACGATTGTTGTCGTGAGGGTGCT GACGTTATGGGAGGAAGAGGGAAGGGGGCAGGGAAAGCGGAGTCTTCCAC GAAAAGCTCGGAGGAGAGGATGCTCGAGGCCGTGGGGTCGATGTTCGGAG GGCTTGGCGGCGAATCCGAGGGGGACGAGGTGAGCAGCGTGTGAGCATCG ATCGGGCTGCCGATGCATCGCTTTCTTTGGTATCATAGATATCGCGTTGT CCCTGCGGCCTGGCGGGTCATTTTTGAGTCGGTTGTGGCGCACCATGTGG GTGGTCGTCTCTCGCCTTCTCTGAGAGATAGAGCCAACAGCACCAAAGGA ATACCCTCCGCGGAGACGAAATAATGGCGACTCAGGAGAATTTTGGTTGA ATTCCTTACAGTCAGGGTTCGGTGTGGTGGGAAAACATCGTACGGTGTCA GACGAGACATTTTTTGCGTGTCAGTAGAGACAGATGGCGGGCTCTCGCCT TCTTCGTGCTGACACGGGACGCGCCTTGGGACGGAGTAGGTAGGATAGGA TAGTCAGCTGAGGCCGAGGTCCACGGAGCACGACTCCTTCGGCGGTGCCT CTCTTTTGTCCGAGGTGTTCGCTTTTTGTATCCGGCAGCGCATCCATGCT TCCCGCGGAGCAGGGGTGGGTGCGGTGAGGTCCACGAGAAGCGGGACGTT TGGTGATTTTTTTTCTGTCCAGTGCGTCAAGCTGCCCACGGGAGCAGAGG CAACCCCCCAATTTTTCTGTCCAGTGCGTCAAGCTGCCCACGGGAGCAAA GACAACCCCCCAAATGAGGGGTGTCCAAGTTAGGCCGGAAGTCAGGACAA AGGATGTATTCTACGAATTTGCGTGGATCCTGCCGATCGTGATGTGTCAT TGTGGTCGTTGTCCTTGTTGTTTCTTCCAGCAGAGAGTTCTCATCGAAGA AGGACAGAGCGGGCGCCGCAGAAGTGCGCCGCAGCATGCGCGTAGGGCGT GGTTCGAAGCGGAAAGAGCGGAGGGCAACCCCGCGTCACACGCCAACCCC TTTTCCACCCCCCGCACCAAAGCTTGAGCTTGTTTCTGATGCTCCTTATT TATACGCCGCCGTGCGAACGGGAACCGACCCCAGTATTTCCAGTCTTACT GCCCTGCCCAGCACGAGGACCCATCTGTGTTGCTTATCAACTGCGTGCCG TATCGCGATCATCCACGTGGCATGTAGTCCCCCCGACACTGCCGTTCCTT CCTGCCCGTGTCGTCTGTTTTGGCCACCTCTCTGAATCACCAACAACGCA TGTGAACGTACGCTCAGATGGAGCTGCTGATGGGCGAGGTCCGGAAAGCC AGAGAGCTGGGGGACAGCGTGCCGGACGACGAGCGGCGAGCTCGCGCCGA AAATGTGGCCATGAAGCTGGCGGCGTTGCTCGGCGACCTCGGCGAAGACT CCGAGGACGACGAGAGATAGACACGCGCCAGACTGGTGGAGATAGATAGA TGCCTGATTCTACGGTCCTTGAGTTTGGTGGCCGACGGTGATGCATGGAC CTTCTGAACAACAGCATTGTTGTGTAGGAGTGGAAATCTTGGGAGGAGTG GAAGTGTTGGGCGCCGGTTGCCTCCGTTCATCAAGTCGTTAATCAGGTCG TTCATCAAGTCCTCACGACGTCTTGCTTGCGTGTGTGTCTTGTTTCTTGT TTCCCGGGAGCGGCTGTCGGACCGCGCTGAAAATGGTCGACTGGTGACGA GTCGAAACACCCGTCTTCCGGACGAGGAAAAGGCGCCGTATATGCGTGTA CGCCACGCGGGGGTCATCCAAGCTGTCGAGAGGGGGGTGTTTGTGGAAGG AGGCGGCGAAGTAGGTGTGGATTGCTAGGCGCCTTGGGCGGTGTCTCCGC CCTGGGATGACGTTGGCCAGGCGTAAAATGAAATGGGGATGAGATCGAAA CCGCCCGACCTCTTGAAAAACAGGGGGGCACGGCCTCAAAAGTGCATCGG GACCATTCAAATCCCGTACAAGTGCTCGTGTGTTGATACTAAAACAAAAA GGGAAAACGTAGAGCAACAGTAGAGCAAGGGGGCAAGTATCTGTGAGTTC GAATGAGTACTGGGCGGCCTTGGGCAGACAAGTTCAATTCCCGGACTATG GCTTCAGGCGGCGGGTGGCGGTGTTAGGTCATGTCGGTTAAAGTTCCGGG GGAGCGGACGAAAACGGCAGGCGAGCTCCATCTCTTAAGTTTCTTCCCAA CGCACGAAATCGATTCTTAAAACCGT
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1407:13801..21676-

>mRNA_H-canaliculatus_F_contig1407.3219.1 ID=mRNA_H-canaliculatus_F_contig1407.3219.1|Name=mRNA_H-canaliculatus_F_contig1407.3219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2868bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1407:13801..21676- (Hapterophycus canaliculatus Oshoro5f female)
ATGCAATGGGCGGCTTTCGTGGACGATAGGGATCAGTGCGCCTTTCGAAT
TTGCGTGGGAAGCAAGATGCAATGGGCGGCTTTCGTGGACGATAGGGATC
AGTGCGCCTTTCGAATTTGCGTGGGAAGCAAGCTAGATTTGCTGACGGAG
GAGGCAGAGGAAGGAGGAGCATCAGCCGGCGGGGCTGGCTTTGGCCAATC
GCTGGCTGAGACCGCGAGAGCGGAGGGTCGGGGGGGGGGCGGTGAGGGCG
CCGGGGGAGGGAACGAGGGCGGCGGTGTGCGGGAGAGACGGAGGCGCTGT
CTGGAGTGGTGCCTCGATCACGGGTTGGAGTACGTTGAGGCCGACTGCAG
GGATGTGCAACGAGCTAGATTTGCTGACGGAGGAGGCAGAGGAAGGAGGA
GCATCAGCCGGCGGGGCTGGCTTTGGCCAATCGCTGGCTGAGACCGCGAG
AGCGGAGGGTCGGGGGGGGGGCGGTGAGGGCGCCGGGGGAGGGAACGAGG
GCGGCGGTGTGCGGGAGAGACGGAGGCGCTGTCTGGAGTGGTGCCTCGAT
CACGGGTTGGAGTACGTTGAGGCCGACTGCAGGGATGTGCAACGAGGCGG
GGAGCTCAGAGAAAAGGAAGGCGTGCCTCGCGTGGTGGAGGCGCTCCAGT
CCAACGTCTGGACGGGCATGGAGTTCCGCACCGACAACCGGCCTTCTCTG
ATGGCGGCGGCAGCGGCAGCGTCGGGGCCCCCGGGGGGCGTCGGCGGCGG
GGGTAACATCGGCGGCGTCGGGTCCGTGTCGAGATCCAGCAGCGGCGGGG
AGGGCGGGACCGCCACGTTGTCGCCCTCGGTCGGCGATGGGGAGGAGGAG
GTGGCGGGGAGCTCAGAGAAAAGGAAGGCGTGCCTCGCGTGGTGGAGGCG
CTCCAGTCCAACGTCTGGACGGGCATGGAGTTCCGCACCGACAACCGGCC
TTCTCTGATGGCGGCGGCAGCGGCAGCGTCGGGGCCCCCGGGGGGCGTCG
GCGGCGGGGGTAACATCGGCGGCGTCGGGTCCGTGTCGAGATCCAGCAGC
GGCGGGGAGGGCGGGACCGCCACGTTGTCGCCCTCGGTCGGCGATGGGGA
GGAGGAGGTGAGCGAGTACCTCAGCGGTTTCGTAAACGGGGACGATGGTG
ACGCAGAGTACGCTGGCTACGGCGCCCTTGATAGCGGCGATGACGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGACA
AAACGGGGGAGGGACGGGGCAGGAGGACGGAGGGGAGGGACGAGACGAAG
ATGAGGTCGGGGTCGACGCCACTCATATCGAGAGCGAGTACCTCAGCGGT
TTCGTAAACGGGGACGATGGTGACGCAGAGTACGCTGGCTACGGCGCCCT
TGATAGCGGCGATGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGAAGGAGGAGGAGGGACAAAACGGGGGAGGGACGGGGCAGGAGGAC
GGAGGGGAGGGACGAGACGAAGATGAGGTCGGGGTCGACGCCACTCATAT
CGAGCTACAGGCACGGTGGGAGCAGCCAGACCTCTCTTCGCCGTCTCCGG
GTGCTGGCCGAGACGCGTCCGGCGTCGCCGCCCCACAACTGGCCGAAGAT
GTAGCAGCTAGCCGCCAGGACAGGAGTCTAGAAACGGCGAACCCGTCCTC
CGAACCGGTCGGAGGAACGGCCCCCGTGCACGAAGGCGACGGAGGAAAAA
TCGCCGCAGACGAGGAAAATACCACCGGGCTCGTAGCGAAAACCGGCGGA
GGGGGCGCGGCGACGGAGAGTGCGAGCGTGCGACACGAAGGCGGCGCCGA
ACTTCCCGGGAATTTTTCTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTA
CCGAACACGATTGTTGTCGTGAGGGTGCTGACGTTATGGGAGGAAGAGGG
AAGGGGGCAGGGAAAGCGGAGTCTTCCACGAAAAGCTCGGAGGAGAGGAT
GCTCGAGGCCGTGGGGTCGATGTTCGGAGGGCTTGGCGGCGAATCCGAGG
GGGACGAGCTACAGGCACGGTGGGAGCAGCCAGACCTCTCTTCGCCGTCT
CCGGGTGCTGGCCGAGACGCGTCCGGCGTCGCCGCCCCACAACTGGCCGA
AGATGTAGCAGCTAGCCGCCAGGACAGGAGTCTAGAAACGGCGAACCCGT
CCTCCGAACCGGTCGGAGGAACGGCCCCCGTGCACGAAGGCGACGGAGGA
AAAATCGCCGCAGACGAGGAAAATACCACCGGGCTCGTAGCGAAAACCGG
CGGAGGGGGCGCGGCGACGGAGAGTGCGAGCGTGCGACACGAAGGCGGCG
CCGAACTTCCCGGGAATTTTTCTGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGTACCGAACACGATTGTTGTCGTGAGGGTGCTGACGTTATGGGAGGAAG
AGGGAAGGGGGCAGGGAAAGCGGAGTCTTCCACGAAAAGCTCGGAGGAGA
GGATGCTCGAGGCCGTGGGGTCGATGTTCGGAGGGCTTGGCGGCGAATCC
GAGGGGGACGAGATGGAGCTGCTGATGGGCGAGGTCCGGAAAGCCAGAGA
GCTGGGGGACAGCGTGCCGGACGACGAGCGGCGAGCTCGCGCCGAAAATG
TGGCCATGAAGCTGGCGGCGTTGCTCGGCGACCTCGGCGAAGACTCCGAG
GACGACGAGAGATAGATGGAGCTGCTGATGGGCGAGGTCCGGAAAGCCAG
AGAGCTGGGGGACAGCGTGCCGGACGACGAGCGGCGAGCTCGCGCCGAAA
ATGTGGCCATGAAGCTGGCGGCGTTGCTCGGCGACCTCGGCGAAGACTCC
GAGGACGACGAGAGATAG
back to top