prot_H-canaliculatus_F_contig14039.3204.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14039.3204.1
Unique Nameprot_H-canaliculatus_F_contig14039.3204.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length161
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14039.3204.1 vs. uniprot
Match: D7FZJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ4_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 3.370e-6
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 0 
Query:  133 QVTKPGDRWLGSPVMTFRQRHEGGDEQIS 161
            QV  PGD WLGSP + FRQRHEGGDEQIS
Sbjct:  823 QVINPGDMWLGSPALAFRQRHEGGDEQIS 851
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14039.3204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZJ4_ECTSI3.370e-679.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14039contigH-canaliculatus_F_contig14039:1718..2200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14039.3204.1mRNA_H-canaliculatus_F_contig14039.3204.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14039 1711..2200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14039.3204.1 ID=prot_H-canaliculatus_F_contig14039.3204.1|Name=mRNA_H-canaliculatus_F_contig14039.3204.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=161bp
MNRKVYLFFISFLPFSLACPEHICSTAFGSEGSAMVKPSPGLSEVGQSAP
HLEKVRGSFFKEALFRKTPSPTSVDRRRTPPGTITSVRRGGASMPPEVYK
RSIVWTPSPLNRGCCLRASTLARSHLPFHPPSQVTKPGDRWLGSPVMTFR
QRHEGGDEQIS
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