prot_H-canaliculatus_F_contig14006.3188.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14006.3188.1
Unique Nameprot_H-canaliculatus_F_contig14006.3188.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length59
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14006.3188.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.090e-11
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:    1 MFADGLSAGERNAAHSLAAKRGLGHESRGDEGKRALFVWKVRQTRVPMSVLE 52
            +F  GLSA ERNAAHSLAA  GLGHESRGDEG RAL +WK       +S+ E
Sbjct:  773 VFPSGLSARERNAAHSLAAGEGLGHESRGDEGNRALHLWKPESEEEAVSIRE 824
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14006.3188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE4.090e-1163.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainPFAMPF01424R3Hcoord: 6..40
e-value: 1.2E-5
score: 25.2
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 1..46
e-value: 7.4E-7
score: 30.9
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 4..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14006contigH-canaliculatus_F_contig14006:179..355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14006.3188.1mRNA_H-canaliculatus_F_contig14006.3188.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14006 122..689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14006.3188.1 ID=prot_H-canaliculatus_F_contig14006.3188.1|Name=mRNA_H-canaliculatus_F_contig14006.3188.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=59bp
MFADGLSAGERNAAHSLAAKRGLGHESRGDEGKRALFVWKVRQTRVPMSV
LEHVFRGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036867R3H_dom_sf
IPR001374R3H_dom