mRNA_H-canaliculatus_F_contig14000.3183.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: D7G5I9_ECTSI (Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I9_ECTSI) HSP 1 Score: 264 bits (675), Expect = 2.920e-83 Identity = 133/162 (82.10%), Postives = 138/162 (85.19%), Query Frame = 1
Query: 1 YQVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNSHTVVGYENTDGGVTVKLEDGGEVHADILVGADGIWSQVR 486
Y VKVIEKTN FRRFGGPIQLASNALSTIKAID FF KIM+YFTFTG+RTNGIKDGIRTEW YCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNS TVVG+ENTDGGVTVKL+DGGEVHAD+LVGADGIWSQVR
Sbjct: 129 YDVKVIEKTNAFRRFGGPIQLASNALSTIKAIDSTFFNKIMEYFTFTGIRTNGIKDGIRTEW------------------YCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNSQTVVGFENTDGGVTVKLKDGGEVHADVLVGADGIWSQVR 272
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A835YX74_9STRA (Zeaxanthin epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX74_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.410e-61 Identity = 104/162 (64.20%), Postives = 118/162 (72.84%), Query Frame = 1
Query: 1 YQVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNSHTVVGYENTDGGVTVKLEDGGEVHADILVGADGIWSQVR 486
+ V V EKT+ F+RFGGPIQLASNALSTIKAIDP FE +M FTFTGVRTNGI DG+RTEW Y KFDAIT ADM LPYTGV+DRPDLQA+L+ED+GE VV N++TV GY NTD GV V LE G +H D+L+GADGIWSQVR
Sbjct: 111 FDVTVFEKTDSFKRFGGPIQLASNALSTIKAIDPKLFESLMKKFTFTGVRTNGIMDGLRTEW------------------YTKFDAITAAADMRGLPYTGVVDRPDLQAILLEDLGENVVHNANTVCGYRNTDNGVEVLLEGGKTMHGDVLIGADGIWSQVR 254
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A7S2XX09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX09_9STRA) HSP 1 Score: 180 bits (456), Expect = 3.210e-55 Identity = 97/161 (60.25%), Postives = 113/161 (70.19%), Query Frame = 1
Query: 7 VKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNSHTVVGYENT-DGGVTVKLEDGGEVHADILVGADGIWSQVR 486
V V EKT+EF+RFGGPIQLASNALSTIKAID FEKIM+ FTFTG+RT GIKDG+R+ W Y KFDAI ADM +LPYTGVI+RPDLQ V++++IGEGV+ N VV YE+ GGV V LE G +V D L+GADGIWS VR
Sbjct: 11 VSVYEKTDEFKRFGGPIQLASNALSTIKAIDNQLFEKIMEKFTFTGMRTCGIKDGMRSTW------------------YSKFDAIAGAADMANLPYTGVINRPDLQEVMLKEIGEGVMNNGKPVVSYEHLLSGGVEVTLESGEKVEVDALIGADGIWSAVR 153
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A7S0VSE2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSE2_9CRYP) HSP 1 Score: 171 bits (434), Expect = 1.030e-47 Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 1
Query: 4 QVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIG-EGVVFNSHTVVGYENTDG--GVTVKLEDGGEVHADILVGADGIWSQVR 486
+V+V+EKTN+F RFGGPIQLASNAL+TIK ID + F+++M FTFTG RTNGIKDGIRT+W Y KF+AI+ MAD ++LPYTGVIDRPDLQ +L+++IG + V VV YE G GV L+DG +V D+LVG+DGIWS +R
Sbjct: 112 EVEVLEKTNKFARFGGPIQLASNALATIKGIDENLFDRVMKKFTFTGTRTNGIKDGIRTQW------------------YTKFNAISDMADYFTLPYTGVIDRPDLQELLLDEIGGDDTVRRDAEVVKYEQLPGCEGVRATLKDGTQVTGDVLVGSDGIWSAIR 257
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A7S0TSL7_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSL7_HEMAN) HSP 1 Score: 171 bits (432), Expect = 2.290e-47 Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 4 QVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIG-EGVVFNSHTVVGYENTDG--GVTVKLEDGGEVHADILVGADGIWSQVR 486
+V+V+EKTN+F RFGGPIQLASNAL+TIK ID + F+++M FTFTG RTNGIKDGIRT+W Y KF AI+ MAD ++L YTGVIDRPDLQ +L+++IG + V VV YE G GV L+DG EV DILVG+DGIWS +R
Sbjct: 121 EVQVLEKTNKFARFGGPIQLASNALATIKGIDENLFDRVMSKFTFTGTRTNGIKDGIRTQW------------------YTKFQAISDMADYFTLAYTGVIDRPDLQELLLDEIGGDATVQRDAEVVKYEQLPGSEGVKATLKDGTEVTGDILVGSDGIWSSIR 266
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: L1JNY8_GUITC (Zeaxanthin epoxidase, plastid-targeted n=5 Tax=Guillardia theta TaxID=55529 RepID=L1JNY8_GUITC) HSP 1 Score: 166 bits (421), Expect = 7.320e-46 Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 4 QVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEG-VVFNSHTVVGYENT-DG-GVTVKLEDGGEVHADILVGADGIWSQVR 486
+V ++EKT +F RFGGPIQLASNAL+TIK ID F ++M+ FTFTG RTNGIKDGIRT+W Y KFDAIT+MA+ ++LPYTGV+DRPDLQ +L++ +GE V S V +E DG GV V LEDG AD+LVGADGIWS +R
Sbjct: 105 KVLILEKTGKFARFGGPIQLASNALATIKGIDETLFTEVMEKFTFTGTRTNGIKDGIRTQW------------------YTKFDAITKMAEYFNLPYTGVVDRPDLQEILLKSVGEDETVRRSSPVSRFEQLGDGKGVKVYLEDGTCEEADVLVGADGIWSTIR 250
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A7S0F566_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F566_9CRYP) HSP 1 Score: 166 bits (419), Expect = 1.490e-45 Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 4 QVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIG-EGVVFNSHTVVGYENT-DG-GVTVKLEDGGEVHADILVGADGIWSQVR 486
+V ++EKT +F RFGGPIQLASNAL+TIK ID F ++M+ FTFTG RTNGIKDGIRT+W Y KF+AIT+MA+ ++LPYTGV+DRPDLQ +L++ +G + V S V +E DG GV V +EDG AD+LVGADGIWS VR
Sbjct: 108 KVLILEKTGKFARFGGPIQLASNALATIKGIDETLFTEVMEKFTFTGTRTNGIKDGIRTQW------------------YTKFEAITKMAEFFNLPYTGVVDRPDLQEILLKSVGGDETVRRSSPVARFEQLGDGKGVKVYMEDGTSEEADVLVGADGIWSTVR 253
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A1Q9F2I6_SYMMI (Zeaxanthin epoxidase, chloroplastic n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9F2I6_SYMMI) HSP 1 Score: 167 bits (423), Expect = 6.120e-45 Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 4 QVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNSHTVVGYENTDG--GVTVKLEDGGEVHADILVGADGIWSQVR 486
+V V+E+ + F+RFGGPIQLASNALS I+ +D + FE++M FTFTG R NG+ D +RTEW YC FDA+ A+MY LPYTGV+DRPDLQ ++++ + EGV+ N+ VVGYE GV +K EDG E AD+L+GADGIWS R
Sbjct: 4418 KVTVLEQASAFQRFGGPIQLASNALSVIRDVDAELFEELMKRFTFTGYRKNGLVDALRTEW------------------YCTFDAMKDSAEMYDLPYTGVVDRPDLQEIMLQALPEGVLVNATKVVGYEKLPNYEGVNIKTEDGTEYKADVLIGADGIWSATR 4562
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A1Z5KR42_FISSO (Zeaxanthin epoxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR42_FISSO) HSP 1 Score: 164 bits (414), Expect = 9.470e-45 Identity = 90/168 (53.57%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 7 VKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVS---YCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDI---GEGVVFNSHTVVGYENT-DG-GVTVKLEDGGEVHADILVGADGIWSQVR 486
V + EKT F RFGGPIQ ASNALST+K ID FE++M+ FTFTG R GIKDG+R + R+ S LV+ + KF + Q AD++ LPYTGVIDRPDLQ +L+++ EG + N + VVGYEN DG GVT++L+DG HAD+L+GADGIWS VR
Sbjct: 87 VTIYEKTQAFARFGGPIQFASNALSTLKEIDETVFERVMEKFTFTGTRVCGIKDGLRADGSFRMTDDSWDFLVNKDAPPDWFVKFP-LKQCADLFGLPYTGVIDRPDLQEILLDECKKRDEGFIENGNAVVGYENLPDGKGVTIQLQDGSTAHADVLIGADGIWSNVR 253
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Match: A0A7S4UW46_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UW46_9DINO) HSP 1 Score: 164 bits (415), Expect = 1.040e-44 Identity = 84/163 (51.53%), Postives = 104/163 (63.80%), Query Frame = 1
Query: 4 QVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRTNGIKDGIRTEWCVRVCHASGGSLVSVCVSYCKFDAITQMADMYSLPYTGVIDRPDLQAVLMEDIGEGVVFNSHTVVGYE--NTDGGVTVKLEDGGEVHADILVGADGIWSQVR 486
QVKV+E+ F RFGGPIQLASNALS I+ ID FE +M+ FTFTG R NG+ D +RTEW +C FDA+ ADM++LPYTGV+DRPDLQ +L++ + +G V N+ V GY GV V+ EDG EV DIL+GADGIWS R
Sbjct: 152 QVKVLEQATAFARFGGPIQLASNALSVIRDIDESLFESLMERFTFTGYRRNGLVDALRTEW------------------FCPFDAMKSAADMFALPYTGVVDRPDLQEILLDSLPQGTVENTKRVAGYTILPDHAGVRVRCEDGAEVECDILLGADGIWSATR 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14000.3183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14000.3183.1 >prot_H-canaliculatus_F_contig14000.3183.1 ID=prot_H-canaliculatus_F_contig14000.3183.1|Name=mRNA_H-canaliculatus_F_contig14000.3183.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=162bp YQVKVIEKTNEFRRFGGPIQLASNALSTIKAIDPDFFEKIMDYFTFTGVRback to top mRNA from alignment at H-canaliculatus_F_contig14000:969..2791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14000.3183.1 ID=mRNA_H-canaliculatus_F_contig14000.3183.1|Name=mRNA_H-canaliculatus_F_contig14000.3183.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1823bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14000:969..2791- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14000:969..2791- >mRNA_H-canaliculatus_F_contig14000.3183.1 ID=mRNA_H-canaliculatus_F_contig14000.3183.1|Name=mRNA_H-canaliculatus_F_contig14000.3183.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=972bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14000:969..2791- (Hapterophycus canaliculatus Oshoro5f female)back to top |