prot_H-canaliculatus_F_contig140.3178.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig140.3178.1
Unique Nameprot_H-canaliculatus_F_contig140.3178.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length157
Homology
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BLAST of mRNA_H-canaliculatus_F_contig140.3178.1 vs. uniprot
Match: D7FV65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV65_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.700e-35
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 0 
Query:    2 ELAEKDFSDAVSACLREFGEVDIVTARTLAHLARVCSFQGMVEVAAPMYERILRIHEALPVPSSCDHAVALRELAVLRDKCGMPTDASMLRRRADGIML 100
            E+AEK+F+ AVSACL  FGE DIVTARTLAHLARVC  QG V+VA  MYERILRIHEALP P + DHAVAL ELA +R++ G    A +LRRRAD IM+
Sbjct:   21 EIAEKEFTKAVSACLTAFGETDIVTARTLAHLARVCRLQGKVDVAIQMYERILRIHEALPEPLNSDHAVALGELAAIREEGGSQGSADILRRRADVIMV 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig140.3178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV65_ECTSI1.700e-3568.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..150
e-value: 6.1E-10
score: 40.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig140contigH-canaliculatus_F_contig140:44629..45330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig140.3178.1mRNA_H-canaliculatus_F_contig140.3178.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig140 44618..45475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig140.3178.1 ID=prot_H-canaliculatus_F_contig140.3178.1|Name=mRNA_H-canaliculatus_F_contig140.3178.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp
MELAEKDFSDAVSACLREFGEVDIVTARTLAHLARVCSFQGMVEVAAPMY
ERILRIHEALPVPSSCDHAVALRELAVLRDKCGMPTDASMLRRRADGIML
GAQVPVAASAKSNGIEIGRDEAEDEGSDNASESEDGDQEESDPDHDSGAF
DEEVVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf