prot_H-canaliculatus_F_contig140.3173.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig140.3173.1
Unique Nameprot_H-canaliculatus_F_contig140.3173.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length286
Homology
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 4.540e-86
Identity = 161/196 (82.14%), Postives = 171/196 (87.24%), Query Frame = 0
Query:    3 VVQPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAP--YGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKLAHREDAAKAGKNAAADPFTAAASTARKAASPF 196
            V QPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFR LVG LLSCGLTF+PQSA     S+ S+A AP  +GAA GAQEFALEPAIDQLL YEGY+FAHPRLAPPLRPMVAHEV LEGMR+AEA+KL+HREDAA A KN A+DPF AA+S  R    PF
Sbjct:  681 VTQPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRELVGILLSCGLTFSPQSA-----SSSSSASAPPAFGAATGAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEAAKLSHREDAAFA-KNEASDPFAAASSATRGTGHPF 870          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 7.030e-12
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    6 PKKDYEARTARAAKSNILHSFADGRQLGAT-GRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTF 88
            P+KD+E R+AR ++ +IL SF +G  L A   R    +VLD++S LM IL P+LRP+NPDL S  E+A  R LV  LL+CG+++
Sbjct:  422 PRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISY 505          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.070e-11
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    6 PKKDYEARTARAAKSNILHSFADGRQLGAT-GRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTF 88
            P+KD+E R+AR ++ +IL SF +G  L A   R    +VLD++S LM IL P LRP+NPDL S  E+A  R LV  LL+CG+++
Sbjct:  823 PRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTPVVLDVVSPLMHILNPNLRPVNPDLYSFAEKAGLRHLVDVLLACGISY 906          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: UPI000333E3A2 (chromosome transmission fidelity protein 18 homolog n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI000333E3A2)

HSP 1 Score: 70.5 bits (171), Expect = 6.570e-10
Identity = 56/170 (32.94%), Postives = 80/170 (47.06%), Query Frame = 0
Query:    6 PKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKLAHREDAAKAG 174
            P    EA+  R+   N++     G       R T QALVLDML  L+D+L P LRP++  L S +E+ +  GLVGT+L+  LT+  +        TP           G   + LEP ++ +  +       P L    + +VA EV LE MR+ EA  L  +  AA  G
Sbjct:  719 PSSQQEAQNRRSQTENLIQMLVSGIAPSTRSRATPQALVLDMLCPLLDVLTPKLRPVSTQLYSAREKQQLAGLVGTMLAYSLTYRQER-------TPD----------GQYTYRLEPNVEDICRFPELPARKP-LTYQAKQLVAREVELEKMRRVEALALTAQGPAADGG 870          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A8C3X7M3_9CETA (Chromosome transmission fidelity factor 18 n=1 Tax=Catagonus wagneri TaxID=51154 RepID=A0A8C3X7M3_9CETA)

HSP 1 Score: 70.1 bits (170), Expect = 8.830e-10
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 0
Query:    3 VVQPKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKLA 165
            +  P    EA++ R+   N++ +   G    A  R   QALVLD L  L+DILAP LRP++  L S +E+ +   LVGT+L+  LT+  + A TP                G   + LEP ++++  +       P L    + ++A E+ LE MR+AEA+  A
Sbjct:  722 IAYPSSQQEAQSRRSRTQNLIETLVSGITPAARSRAAPQALVLDTLCLLLDILAPKLRPVSTQLYSAREKQQLASLVGTMLAYSLTY--RQARTPD---------------GQYVYRLEPNVEEVCRFPELPARKP-LTYQAKQLLAREIELEKMRRAEAAARA 867          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A2Y9DEN6_TRIMA (chromosome transmission fidelity protein 18 homolog n=1 Tax=Trichechus manatus latirostris TaxID=127582 RepID=A0A2Y9DEN6_TRIMA)

HSP 1 Score: 69.7 bits (169), Expect = 1.190e-9
Identity = 56/178 (31.46%), Postives = 85/178 (47.75%), Query Frame = 0
Query:    6 PKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKLAHREDAAKAGKNAAADPF 182
            P    EA+   +   N++ +   G    A  R T QALVLD L  L+DIL P LRP++  L S +E+ +  GLVGT+L+  LT+  +        TP           G   + LEP ++++  +       P L    + ++A E+ +E MR+AEA   A +   A  G + AA P 
Sbjct:  726 PSSQQEAQNRTSQMQNLIQTLVSGITPSARSRATPQALVLDALCPLLDILTPKLRPVSTQLYSAREKQQLAGLVGTMLAYSLTYRQER-------TPD----------GQYTYRLEPNLEEICRFPELPARKP-LTYQAKQLIAREIEVEKMRRAEALAPAAQGPQADGGPSGAAGPL 885          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A6I9KKZ8_CHRAS (chromosome transmission fidelity protein 18 homolog n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9KKZ8_CHRAS)

HSP 1 Score: 69.3 bits (168), Expect = 1.600e-9
Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 0
Query:    3 VVQPKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKLA 165
            ++ P    EA+       N+L     G    A  R T QALVLD L  L+DIL P LRP++  L S +E+ +  GLVGT+L+  LT+  +               P G  A    + LEP ++++  +       P L    + ++A E+ +E MR+AEAS LA
Sbjct:  728 LIFPSSQQEAQNRMNQSQNLLQMLVSGITPSARSRATPQALVLDTLCPLLDILMPKLRPVSTQLYSAREKQQLAGLVGTMLAYSLTYRQE-------------RMPDGQYA----YRLEPNVEEICRFPELPTRKP-LTYQAKQLIAREIEVEKMRRAEASALA 873          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: UPI00187A781C (chromosome transmission fidelity protein 18 homolog isoform X1 n=14 Tax=Manis TaxID=9973 RepID=UPI00187A781C)

HSP 1 Score: 68.2 bits (165), Expect = 3.880e-9
Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 0
Query:    3 VVQPKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKL 164
            VV P    EA++  +   N++ +   G       R T QALVLD L  L+DIL P LRP++  L S +E+ +   LVGT+L+  LT+  +                     G   + LEP +++L  +       P L    + ++AHE+ +E MR+AEA  +
Sbjct:  742 VVFPSSQQEAQSRTSRMQNLIQTLVSGIAPATRSRATPQALVLDTLCLLLDILTPKLRPVSTQLFSAREKQQLASLVGTMLAYSLTYRQERMPD-----------------GLYVYRLEPNVEELCRFPELPTRKP-LTYQAQQLIAHEIEMEKMRRAEARAM 886          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A3Q0EB26_CARSF (LOW QUALITY PROTEIN: chromosome transmission fidelity protein 18 homolog n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A3Q0EB26_CARSF)

HSP 1 Score: 67.8 bits (164), Expect = 5.090e-9
Identity = 52/164 (31.71%), Postives = 79/164 (48.17%), Query Frame = 0
Query:    3 VVQPKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEASKLA 165
            +V P    EA+T      N+L +   G       RTT QAL+LD L  ++DIL P LRP++  L S +E+ +   LVGT+L+  LT+  +  A                  G   + LEP +++L  +       P L    + ++AHE+ +E MR+AE S  A
Sbjct:  648 MVFPSSQQEAQTRMNQTRNLLQTLVAGITPAMRSRTTPQALLLDALCLMLDILMPRLRPVSTQLYSAREKQQLASLVGTMLAYSLTYHQERTAD-----------------GQYVYRLEPNVEELCRFPELPTRKP-LTYQAKQLIAHEIEVEKMRRAEVSARA 793          
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Match: A0A8C0K4R8_CANLU (Chromosome transmission fidelity factor 18 n=1 Tax=Canis lupus dingo TaxID=286419 RepID=A0A8C0K4R8_CANLU)

HSP 1 Score: 67.0 bits (162), Expect = 8.370e-9
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 0
Query:    6 PKKDYEARTARAAKSNILHSFADGRQLGATGRTT-QALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPSTPSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHEVNLEGMRQAEA 161
            P    EA++  +   N++H+   G       R T QAL+LD L  ++DILAP LRP++  L S +E+ +   LVGT+L+  LT+  +                     G   + LEP ++++  +       P L    + ++AHE+ +E MR+AEA
Sbjct:  458 PSSQQEAQSRTSRTQNLIHTLVAGIAPATRSRATPQALILDALCLILDILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERRPD-----------------GQYIYRLEPNVEEVCRFPELPARKP-LTYQAKQLIAHEIEMEKMRRAEA 596          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig140.3173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K262_9PHAE4.540e-8682.14AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
W7TIW5_9STRA7.030e-1248.81Chromosome transmission fidelity n=2 Tax=Nannochlo... [more]
A0A4D9CU49_9STRA1.070e-1148.81AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
UPI000333E3A26.570e-1032.94chromosome transmission fidelity protein 18 homolo... [more]
A0A8C3X7M3_9CETA8.830e-1032.32Chromosome transmission fidelity factor 18 n=1 Tax... [more]
A0A2Y9DEN6_TRIMA1.190e-931.46chromosome transmission fidelity protein 18 homolo... [more]
A0A6I9KKZ8_CHRAS1.600e-932.93chromosome transmission fidelity protein 18 homolo... [more]
UPI00187A781C3.880e-930.67chromosome transmission fidelity protein 18 homolo... [more]
A0A3Q0EB26_CARSF5.090e-931.71LOW QUALITY PROTEIN: chromosome transmission fidel... [more]
A0A8C0K4R8_CANLU8.370e-929.94Chromosome transmission fidelity factor 18 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23389:SF3CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOGcoord: 6..255
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 6..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig140contigH-canaliculatus_F_contig140:8923..12357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig140.3173.1mRNA_H-canaliculatus_F_contig140.3173.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig140 8923..12357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig140.3173.1 ID=prot_H-canaliculatus_F_contig140.3173.1|Name=mRNA_H-canaliculatus_F_contig140.3173.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=286bp
AAVVQPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHL
MDILAPTLRPLNPDLLSPQERARFRGLVGTLLSCGLTFAPQSAATPSPST
PSTALAPYGAAAGAQEFALEPAIDQLLMYEGYDFAHPRLAPPLRPMVAHE
VNLEGMRQAEASKLAHREDAAKAGKNAAADPFTAAASTARKAASPFVVGG
DATAAAAQAGSAPATAAGSDRRNVVGDNKAGGDGGGAIEDGRAKAAAETA
AERKGEAAATAAAAAKANSKTPPSSPPANKKFRDIE
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