mRNA_H-canaliculatus_F_contig14.3169.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A6H5KI98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI98_9PHAE) HSP 1 Score: 1033 bits (2672), Expect = 0.000e+0 Identity = 683/958 (71.29%), Postives = 734/958 (76.62%), Query Frame = 2
Query: 119 MTPPAAKRRRSAEHHDSGRNNVRVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGNKAQRDAALDMIRSNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQDTGSPTMWGDACCVMLSGTMSNLVKAQGVLLERIANISDRLKEMVPNAVTVSGDQDLGDDKQRVEVNIQLPDGPPPVQAPHXXXXXXXXXXXXPPYGFGGXXXXXXXGPRP------SGPYQSQPPFQQAPFQPPFQGQGLPLQQG----AAPRGRPDMPPMEEITFTSIRQLSAPGLTRASKQPGGMLMLVDNSVVGSIIGKGGQNIRKISTESGASIQVQGRDEQSPSQLERRVTITSDDMPVLMKAANMICAVLRNGERLAAAAREGGDGRGDRGHPGSNGVGRGGGGGDRHRG-PAQYSPSGPPLSAQAPPSATXXXXXXXXXXXXXQQNVQYAPAPAMQSVYPAQQXXXXXXXXQGFVALQAAPGAPIQQQGFQQYAQQVQA-QNPAQQQQLAPQTIPQQQ--AIPTQGVAGQYAPXXVGQQAQVQXXQPT--------AVFYQQQPAVTNGAP-QGGAPAIQYAPLQQPQQLGQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPVYGWVYDPATGTYTAAPAAAAPTPQASSFNAQPQYTQ 2923
MTPPAAKRRRS EHH+S RN + VVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKV+LQETKS+PEG+KERGVGLSG+++CVANVEKLIFEKLNARRVTSLAPSPAEEEFE+AY+ AK AGMEP+ +A DMND P KITVVRWIM+NAHCGWLIGKGGSGI++IEATSGAQVRVATERSLGK+S ERIVYVKGNKAQR+AAL++IR+NPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALT+KTGAQ+RVA GSEVTTGGGEHRVDITGGPKQIVAARHA+QDRVAEW+TSNNPNG+PEE EY+LK+AVPQPLVGHIIGKGG+FVREVL+V N +KIQQDTGSPT+WGDACCVMLSGT N+V+AQ ++LERIAN SDRLKEMVPNAV + + D D+ +RVEVNIQLPDGPPPVQ P PP+G XXXXXXX GP QPPFQQ PRGR D+PP+E ITFTSIRQLSAPGLT ASKQPGGMLMLVDNSVVGSIIGKGGQ IRKIS ESG+SIQVQGRDEQSPSQLERRVTITSD+MPVLMKAANMICAVLRNGERLAAAARE G G DR+RG PA Y+P+G P SAQ P+A QQNVQYAPAPAMQS YPAQQ QGFVALQAAPGAPIQQ +QQY Q P QQQQLAPQ +PQQQ A P QG GQYAP X XX AVFYQQ PA G P QGG AIQYA +QQPQQ Q XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX ATPAPVYGWVYDPATGTYTAAP AAAP PQASSFNAQPQYTQ
Sbjct: 1 MTPPAAKRRRSVEHHESVRN-ITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGMEPNGIADVGDMND-PNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKAQREAALELIRTNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTN--VKIQQDTGSPTLWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQTP-------VGFQQPPPFGXXXXXXXXXXXXXXXXXXXRQGPNMGQPPFQQQQXXXXXXXXXXXXXXXXXXRGPPRGRADLPPVENITFTSIRQLSAPGLTSASKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPVLMKAANMICAVLRNGERLAAAAREAGGGXXXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGLPQSAQPQPTAAPVNYQYQQAPPQ-QQNVQYAPAPAMQSTYPAQQ--------QGFVALQAAPGAPIQQ-AYQQYXXXXXXXQTPGQQQQLAPQGVPQQQQQAPPAQGAVGQYAPQXXXXXXXXXXXXXXXXXXXXXXAVFYQQ-PA--GGTPSQGGPQAIQYAQVQQPQQQQQ-----------LGXXXXXXXXQGLMQQQQQPXXXXXXXXXXXXXXXXXXXXXXXXLPVXXXXXXXXXXXXXXXXPVASTSAAVATPAPVYGWVYDPATGTYTAAPTAAAPAPQASSFNAQPQYTQ 923
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: D8LLL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL1_ECTSI) HSP 1 Score: 948 bits (2451), Expect = 4.330e-311 Identity = 528/721 (73.23%), Postives = 583/721 (80.86%), Query Frame = 2
Query: 119 MTPPAAKRRRSAEHHDSGRNNVRVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGNKAQRDAALDMIRSNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQDTGSPTMWGDACCVMLSGTMSNLVKAQGVLLERIANISDRLKEMVPNAVTVSGDQDLGDDKQRVEVNIQLPDGPPPVQAPHXXXXXXXXXXXXPPYGFGGXXXXXXXGPRPSGPYQSQPPFQQAPFQPPFQGQGLPLQQGAAPRGRP---DMPPMEEITFTSIRQLSAPGLTRASKQPGGMLMLVDNSVVGSIIGKGGQNIRKISTESGASIQVQGRDEQSPSQLERRVTITSDDMPVLMKAANMICAVLRNGERLAAAAREGGDGRGDRGHPGSNGVGRGGGGGDRHRG-PAQYSPSGPPLSAQAPPSATXXXXXXXXXXXXXQQNVQYAPAPAMQSVYPAQQXXXXXXXXQGFVALQAAPGAPIQQ 2269
MTPPAAKRRRS EHH+S RN + VVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKV+LQETKS+PEG+KERGVGLSG+++CVANVEKLIFEKLNARRVTSLAPSPAEEEFE+AY+ AK AG+EP+ +DMND P KITVVRWIM+NAHCGWLIGKGGSGI++IEATSGAQVRVATERSLGK+S ERIVYVKGNK+QR+AAL++IR+NPKITGRVASP+EPEVAAVHVPSKAVGFILGHRGASIQALT+KTGAQ+RVA GSEVTTGGGEHRVDITGGPKQIVAARHA+QDRVAEW+TSNNPNG+PEE EY+LK+AVPQPLVGHIIGKGG+FVREVL+V N Q+KIQQDTGSPTMWGDACCVMLSGT N+V+AQ ++LERIAN SDRLKEMVPNAV + + D D+ +RVEVNIQLPDGPPPVQAP GF G + P +S + PP P + + P P D+PP+E ITFTSIRQLSAPGLT ASKQPGGMLMLVDNSVVGSIIGKGGQ IRKIS ESG+SIQVQGRDEQSPSQLERRVTITSD+MP+LMKAANMICAVLRNGERLAAAARE G DR+RG PA Y+P+GPP SAQ P+A QQNVQYAPAPAMQS YPAQQ QGFVALQAAPGAPIQQ
Sbjct: 72 MTPPAAKRRRSVEHHESVRN-ITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMND-PNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSAERIVYVKGNKSQREAALELIRTNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTLKVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMVPNAVNILENHDPSDEMKRVEVNIQLPDGPPPVQAP---------------VGFQGLL---------NNPRRSASSLPRTGLAPP------PSSEASPPARAPTWADLPPVENITFTSIRQLSAPGLTSASKQPGGMLMLVDNSVVGSIIGKGGQTIRKISLESGSSIQVQGRDEQSPSQLERRVTITSDEMPILMKAANMICAVLRNGERLAAAAREAAGGGRXXXXXXXXXXXXXXXXXDRNRGGPAPYNPAGPPQSAQPQPTAAPVNYQYQQAPPQ-QQNVQYAPAPAMQSTYPAQQ--------QGFVALQAAPGAPIQQ 751
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A7S3XW37_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW37_HETAK) HSP 1 Score: 190 bits (483), Expect = 7.860e-47 Identity = 120/375 (32.00%), Postives = 197/375 (52.53%), Query Frame = 2
Query: 209 IMCPSDAMGMLIGKGGSGLREMQEKTGVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGNKAQRDAALDMIRS----NPKITGRVASPTEPEVAA-----VHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQDTGSPTMWGDACCVMLSGTMSNLVKAQGVLLERIANISDRLKE 1306
++ P D +G +IGKGG+ +R +QE++G + LQ+ KS+P+G KER V LSG+M+ + E+LIFE++ A R + + PE V+W++ CG +IG G+G+ +I+ SGA VRVAT+ + ER+V + G+ Q + ALDM++ +P++ + + A + VP K++G ILG G+ I+ +T ++GA ++V+ +E+ G E V + G P+ + AR I +RV W+ GD LK A+P L+G ++GKGGS +RE+ N +KI QD GS D VM+ G + L +AQ ++++R+ + LK+
Sbjct: 233 LLFPLDGIGTIIGKGGATIRRIQEESGCNLRLQDPKSVPDGMKERAVILSGSMDTIIEAERLIFEQIAAER---------------------------------QQVQEGPESEKTVKWLVPVEKCGLVIGPKGAGVEEIKQASGAYVRVATKFDMPAGHTERLVTIAGSPEQVERALDMVKDRAGGHPQLPASGWNKGQEATVAGDKEVMFVPLKSIGHILGSHGSEIKRITQESGATVQVS--TEMFIGDTERVVTLQGSPESRLRARQLIAERVGTWQQEA---GDQAVDTICLKTAIPYCLIGQVLGKGGSAMREISTTCNVSVKINQDMGSFCDTCDNRPVMMIGELEGLYRAQRMMIDRMLDAPRHLKD 569
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A4D9CVC2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVC2_9STRA) HSP 1 Score: 178 bits (452), Expect = 4.560e-41 Identity = 134/427 (31.38%), Postives = 221/427 (51.76%), Query Frame = 2
Query: 101 PGIKKIMTPPAAKRRRSAEHHDSGRNNVRVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGE-RIVYVKGNKAQRDAALDMIRSNPKITGR----VASPTEPEVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPN-----------------GDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQDTGSPTMWGDACCVMLSGTMSNLVKAQGVLLERIANISDRLKEMV 1312
PG K+ + P + R SG+ L+I+ P++AMG+LIG+ G+ +E+ + V++ +Q+ K M EG +RG+ LSG+ E VA + LI +KL RR + +E +E ++ AG+D ++TV +W + G LIGK G+ + I + SGA++R+ E L + R VYV G KA+RD AL +IR K+ G + P+ V VP +AVG ++G +GA ++ L + TGA++ +A + G E + + GG ++I AAR +++RV W+ + EE E ++K ++P PL+GH+IGKGGSF+RE+ A + +KI Q+ S T D VML+G ++ ++ + LL+R+A+ + E +
Sbjct: 203 PGAKRPLGEPDLREERRRRRF-SGQGQQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRR----------------NSIIREGNLE-DTLFAGSD-----PRVTV-KWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIRE--KVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGGQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRELHA-SGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQI 602
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: K8Z837_NANGC (Kh domain protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z837_NANGC) HSP 1 Score: 175 bits (444), Expect = 1.620e-40 Identity = 130/418 (31.10%), Postives = 212/418 (50.72%), Query Frame = 2
Query: 101 PGIKKIMTPPAAKRRRSAEHHDSGRNNVRVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGE-RIVYVKGNKAQRDAALDMIRSNPKITGR----VASPTEPEVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPN-----------------GDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQDTGSPTMWGDACCVMLSGTMSNLVKAQGVLLERIAN 1285
PG K+ + P + R SG+ L+I+ P++AMG+LIG+ G+ +E+ + V++ +Q+ K M EG +RG+ LSG+ E VA + LI +KL RR + +E +E + A P+ V+W + G LIGK G+ + I + SGA++R+ E L + R VYV G KA+RD AL +IR K+ G + P+ V VP +AVG ++G +GA ++ L + TGA++ +A + G E + + G ++I AAR +++RV W+ + EE E ++K ++P PL+GH+IGKGGSF+RE+ A + +KI Q+ S T D VML+G ++ ++ + LL+R+A+
Sbjct: 203 PGAKRPLGEPDLREERRRRRF-SGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRR----------------NSIIREGNLEDTLFAG-------PDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIRE--KVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGSQQEINAAREIVRERVFAWRMQESKERAERALTEAAAEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRELHA-SGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMAS 593
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: W7T8V1_9STRA (Rna-binding protein nova-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8V1_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.510e-22 Identity = 87/276 (31.52%), Postives = 139/276 (50.36%), Query Frame = 2
Query: 101 PGIKKIMTPPAAKRRRSAEHHDSGRNNVRVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGE-RIVYVKGNKAQRDAALDMIRSNPKITGR----VASPTEPEVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVA 910
PG K+ + P + R SG+ L+I+ P++AMG+LIG+ G+ +E+ + V++ +Q+ K M EG +RG+ LSG+ E VA + LI +KL RR + +E +E + A P+ V+W + G LIGK G+ + I + SGA++R+ E L + R VYV G KA+RD AL +IR K+ G + P+ V VP +AVG ++G +GA ++ L + TGA++ +A
Sbjct: 78 PGAKRPLGEPDLREERRRRRF-SGQGEQDESSYTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRR----------------NSIIREGNLEDTLFAG-------PDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIRE--KVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLA 327
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A7S4R5U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R5U7_9DINO) HSP 1 Score: 89.7 bits (221), Expect = 5.440e-14 Identity = 73/252 (28.97%), Postives = 119/252 (47.22%), Query Frame = 2
Query: 587 GWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGNKAQRDAALDMIRSNPK-------ITGRVASPTEP--EVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSL------KIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQDTGSPTMWGDACCVMLSGTMSNLVKAQGVLLERIANISDR 1297
GWL GKGG+ IR++EA SGAQV + KE G V + G+ AA D+I + I GRV + P EVA H+P K VG++ G G+ I+ + KTGA++R+ + T G ITG P + + ++ V + + + + ++ ++ +PQ VG I G GGS ++++ A + + Q T + A M+ G +V A+ V+ +A + +R
Sbjct: 45 GWLKGKGGAQIREVEARSGAQVSID---QTTKELGYSRVMLAGSAEAVQAAHDIITDELRRVMERDGIAGRVTAAPGPGDEVAETHIPQKYVGWLKGSNGSQIRDMEAKTGARVRI---DQSTRESGYSVAQITGPPDAVRQCKAFVEAEVVRVQERDRVVAEHAQQPSAMGSNGFNEVQIPQQYVGWIKGSGGSQIKDIEARTGAHITVDQST-QDLGYSRA---MVYGPDEAVVAAKQVIQSELARVMER 286
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A7S2APA1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2APA1_9DINO) HSP 1 Score: 85.1 bits (209), Expect = 1.020e-12 Identity = 96/317 (30.28%), Postives = 147/317 (46.37%), Query Frame = 2
Query: 209 IMCPSDAMGMLIGKGGSGLREMQEKTGVKVTLQETKSMPEGSKERG---VGLSGTMECVANVEKLIFEKLNARRVTS--------LAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGN-------KAQRDAALDMIRSNPKITGRVASPTEPEVAA------VHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSLKIAVP 1087
I P +G L GKGG+ +RE++ ++G +V++ +T +K+ G V L G+ ECV N +I E+L RRV LAP+P E EVA EA + P+K + GWL G GG+ IRD+EA +GA++R+ ++S +ESG I + G KA +A + ++ +I AS +P +A V +P + VG+I G GA I+ + +TGA I V + T G R + G + ++AA+ IQ +A + P SL A P
Sbjct: 59 IQIPQQFVGWLKGKGGAQIREIEARSGAQVSIDQT------TKDLGYSRVRLDGSPECVQNAHDIITEEL--RRVMERDGHNSGHLAPTPGPGE-EVA-----EAHI--------------PQK-----------YVGWLKGSGGAQIRDMEARTGARIRI--DQST-RESGYSIAQITGQPDAVRQCKAFVEAEVSRVQERDRIVAEHAS--QPNLARASGFNEVQIPQQYVGWIKGSGGAQIKDIESRTGAHITV---DQSTQDQGYSRAMVYGTEEAVLAAKQIIQGELA--RVMERDRAVPGSASSSLVPAQP 326
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A8B6BZ79_MYTGA (Poly(RC)-binding protein 2/3/4 n=2 Tax=Mytilus TaxID=6548 RepID=A0A8B6BZ79_MYTGA) HSP 1 Score: 82.8 bits (203), Expect = 4.330e-12 Identity = 90/357 (25.21%), Postives = 157/357 (43.98%), Query Frame = 2
Query: 230 MGMLIGKGGSGLREMQEKTGVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDP---EKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGNKAQRDAALDMIRSNPKITGRVASPTEPEVAAVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGE----HRVDITGG------PKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQ-DTGSPTMWGDACCVMLSGTMSNLVKAQ 1258
+G +IGK G +++ +E +G K+ + + S P ER V ++GT +C+ I +K EE+ + A+ + D+ + P + +R ++ + CG LIGKGGS I++I T+GAQ++VA+E + S ER V V G DA I++ + + + S G + +R + TG Q PG ++ E H++ + G + ++ HA VA S P P+ T+ + +I++P L+G IIG+GG + E+ ++ +KI + GSP V ++GT+ + AQ
Sbjct: 30 VGSIIGKKGDNIKKFREDSGAKINISDG-SCP----ERIVTVTGTTDCINKAFTFICKKF-------------EEDLQNAFVL--------------QDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGAQIQVASE--MLPNSTERAVTVSGTA---DAITACIQN---------------ICNIMLESPPKGATIQYRPKPVVPPVIFTGGQAYTVPGGQIPLTIPEMNKLHQISLQQGIPIIPTSQPLLPMHHAPGIPVAYRHAS--PAAIPQNTQQTHEISIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGSPDRK-----VTITGTIETIGLAQ 327
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Match: A0A3B4YXF0_9TELE (RNA-binding protein Nova-1-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4YXF0_9TELE) HSP 1 Score: 81.6 bits (200), Expect = 6.080e-12 Identity = 84/344 (24.42%), Postives = 157/344 (45.64%), Query Frame = 2
Query: 203 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVTLQETKSMPEGSKERGVGLSGTMECVANVEKLIFEKLNARRVTSLAPSPAEEEFEVAYKMAKEAGMEPSSMAAGNDMNDDPEKITVVRWIMENAHCGWLIGKGGSGIRDIEATSGAQVRVATERSLGKESGERIVYVKGNKAQRDAALDMI----RSNPK-----------ITGRVAS--PTEPEVA--AVHVPSKAVGFILGHRGASIQALTDKTGAQIRVAPGSEVTTGGGEHRVDITGGPKQIVAARHAIQDRVAEWKTSNNPNGDPEETEYSLKIAVPQPLVGHIIGKGGSFVREVLAVANTQMKIQQ 1177
L ++ PS A G +IGKGG + ++Q++TG + L ++K G+ ER + GT+E + V I EK+ ++ P P + ++P + +P+++ + I+ N+ G +IGKGG+ ++ + SGA V+++ ++ G ER+V + G Q A+++I + +P+ ++G VA+ PT A A +P+ A G + A+T + T G G + +G ++AA A + A ++ + ++IAVP+ LVG I+GKGG + E + +++I +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPV-------------SILQPQTTV-------NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS-QKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVANSNPTGSPYANTAEVLPNAAAAAATAFSGNDLLAITSALNTLASYGYNTN-TLGLGLNPAAASG----VLAAVAASANPAAAAALADG-------AKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 345 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14.3169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14.3169.1 >prot_H-canaliculatus_F_contig14.3169.1 ID=prot_H-canaliculatus_F_contig14.3169.1|Name=mRNA_H-canaliculatus_F_contig14.3169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=941bp MTPPAAKRRRSAEHHDSGRNNVRVVKGGLSIMCPSDAMGMLIGKGGSGLRback to top mRNA from alignment at H-canaliculatus_F_contig14:60635..88877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14.3169.1 ID=mRNA_H-canaliculatus_F_contig14.3169.1|Name=mRNA_H-canaliculatus_F_contig14.3169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=28243bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14:60635..88877+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14:60635..88877+ >mRNA_H-canaliculatus_F_contig14.3169.1 ID=mRNA_H-canaliculatus_F_contig14.3169.1|Name=mRNA_H-canaliculatus_F_contig14.3169.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5646bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14:60635..88877+ (Hapterophycus canaliculatus Oshoro5f female)back to top |