mRNA_H-canaliculatus_F_contig14.3165.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14.3165.1
Unique NamemRNA_H-canaliculatus_F_contig14.3165.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: A0A6H5L3F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F4_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 8.980e-162
Identity = 258/346 (74.57%), Postives = 277/346 (80.06%), Query Frame = 1 
Query:   49 VFLACATSPARKPNV-SVFAWTQAVVPARQSTLLGSRSMQGKSTADRRSPH------LGGVKRR--WYKSGESSGEKSKDGDDLFRCFAVVSASSKRQNSRPVETDELTQAAKDRATALVEAYVSTPATEGDLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMRGRGANAIGRATLELLEARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRM 1059
            + +A   SP R  +   V AWT  V+P R STL+GS S          + H      +GG   R  W       G  S DGD + RCF+ +   SKRQNSRPV TDELTQ A+DRATALVEAYV TPATEGDLRCIEERQLRHKAGASS S+GVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAID LED+GGIEDVNARLA +E LR DFMAVNLAHG LRRRLVTP+K+ +VEETIGK GAERFLDSGITGVT GKVRDAKCLHAHVADALMRGR ANAIGRATLELLEARG+RTDGGDRCSEQCNYRVEETADSWRYTPQKNKQ+LQ RKVRRK M
Sbjct:    9 LLVAMVASPVRIRSFRGVTAWTHTVIPTRVSTLIGSSSSSSMGRTGEEAVHAAGYLSVGGAFSRGGWRGRRSKRGRNSDDGD-ITRCFSTLG--SKRQNSRPVGTDELTQTARDRATALVEAYVPTPATEGDLRCIEERQLRHKAGASSRSMGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPEKLGMVEETIGKEGAERFLDSGITGVTTGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEARGVRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQKLQMRKVRRKDM 351
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: D8LLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL9_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 2.790e-115
Identity = 178/195 (91.28%), Postives = 183/195 (93.85%), Query Frame = 1 
Query:  475 VGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMRGRGANAIGRATLELLEARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRM 1059
            +GVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAID LED+GGIEDVNARLA +E LR DFMAVNLAHG LRRRLVTPDKM LVEETIGK GA RFLDSGITGVTPGKVRDAKCLHAHVADALMRGR ANAIGRATLELLEARG+RTDGGDRCSEQCNY VEETADSWRYTPQKNKQ+LQ RKVRRK M
Sbjct:    1 MGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPDKMGLVEETIGKEGAGRFLDSGITGVTPGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEARGVRTDGGDRCSEQCNYLVEETADSWRYTPQKNKQKLQMRKVRRKDM 195
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: A0A6S9FG26_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FG26_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.920e-48
Identity = 100/223 (44.84%), Postives = 138/223 (61.88%), Query Frame = 1 
Query:  406 TEGDLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVT--PDKMSLVEETIGKNGAERFLDSGITGVTPGK-VRDAKCLHAHVADALMRGRGANAIGRATLELLEAR-GLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRMN 1062
            T  D+ CIE RQL H  GA+  SVG     C++GFPQAF F P  HKVSSGLFRLSCPLLV+A+D+ E +GG+ +++       E+  DF   N    ++RR +V   P  M  V++ +GK+ AERFL SGI G+ P   + D KCLHAH AD L R  G N IG+  L+ LE + G+   G D+C +QC+    +   +W Y P+KN+Q+L+  + RRK ++
Sbjct:   66 TPEDIDCIENRQLEH--GANIFSVGQR---CKYGFPQAFGFHPVEHKVSSGLFRLSCPLLVRAVDEWEAEGGVREMSDAARSSAEITDDFRETNQRISKIRRSIVESFPGGMEKVQQRLGKDNAERFLSSGIAGLGPNAGLSDVKCLHAHAADHLCRKDGGNIIGKEVLQRLEEKQGINVCGNDKCWQQCDVNHTQGPSNWHYLPRKNRQKLKATRRRRKELD 283
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: A0A7S2HF12_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF12_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.390e-45
Identity = 96/223 (43.05%), Postives = 132/223 (59.19%), Query Frame = 1 
Query:  406 TEGDLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVT--PDKMSLVEETIGKNGAERFLDSGITGV-TPGKVRDAKCLHAHVADALMRGRGANAIGRATLE-LLEARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRMN 1062
            T  D+ CIE RQL H     SA++      C++GFPQAF F P  HKVSSGLFRLSCPLLV+AID+ E +GG+ +++       E+ ADF   N    Q+RR ++   P  M  V+  +G++ +ER+L SGI G+     + D KCLHAHVAD L R  G N IG+  L  L + RG+   G + C +QC+         W Y P+KN+Q+L+  + RRK M+
Sbjct:   36 TLSDINCIENRQLEH-----SANIFFVGKRCKYGFPQAFGFHPVEHKVSSGLFRLSCPLLVKAIDEWEGEGGVREMSDAARSSAEITADFEETNRRIAQIRRSIIDSFPGGMEKVQMHLGEDNSERYLSSGIAGLGLNAGLADVKCLHAHVADHLCRKDGGNRIGQEVLRRLADKRGVNVCGNENCWQQCDVNHNRGPSDWHYLPRKNRQKLKATRRRRKDMD 253
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: A0A8J2S7V2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7V2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.490e-42
Identity = 90/216 (41.67%), Postives = 129/216 (59.72%), Query Frame = 1 
Query:  415 DLRCIEERQLRHKAGASSASVGV-SPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMRGRGANAIGRATLELLEARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRM 1059
            D   +E+RQL H A      VGV + + CRHG+PQA   DP  HK  +G+ RL+CP L +A+D  E +G +  ++A L  ++  R     VN  H   R+ +V  + ++  E  +G +   R LDSGITG+TP K+ D KCLHA +AD L+     NA+G+  LE LEARG+   G ++C EQC+  V    D WRYTP+KNKQ+L+  + R K++
Sbjct:   38 DADVVEQRQLGHPANM----VGVPAVSLCRHGYPQAVLQDPGAHKFGAGMLRLTCPHLCEAVDAWEAEGAVRALSAELLAEDANRDALRKVNERHAVTRKSMVQGEALARAEARLGADTVRRVLDSGITGLTPSKLDDVKCLHAQLADELLSR--DNAVGKKVLEGLEARGVDPTGSEKCGEQCSGCV----DGWRYTPRKNKQKLRATRARHKKL 243
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: A0A7S2PD55_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD55_9STRA)

HSP 1 Score: 159 bits (403), Expect = 7.810e-40
Identity = 103/254 (40.55%), Postives = 140/254 (55.12%), Query Frame = 1 
Query:  331 ETDELTQAAKDRATALVEAYVSTPATEGDLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPC-GHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDE--ELRADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMRGRGAN---------AIGRATLELLE-ARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRK 1053
            ETD++   A +R TA +        TE DL+ I+ERQ+ HK   S  +   SP  CRHGFPQAF F P  G K+ SGLFRLSCPLLVQ ID+ E   G+ ++   L  D   + R  +   N    Q+R  LV  D   LV   +G+  A +F++SGI G+   +  + KC+HAHVAD L R   +N          IG   L +L+  RG+ T G D C +QC+ R E+    W Y P+KN+Q L++ + RRK
Sbjct:   80 ETDKI-NIATERTTATIANQTFFLPTEQDLQTIQERQVCHKLEPSQVTCVSSP--CRHGFPQAFGFHPTKGPKLVSGLFRLSCPLLVQQIDEWEGQSGVREMTDWLRNDVNGDKRKGYERANEMQKQIRSELVAEDYDKLVSR-MGEYNAAKFVESGIAGIPSSQTYNVKCIHAHVADHLCRSSQSNNTNTSTEGNIIGEHALNILQNQRGVSTLGNDVCWQQCSLRHEQLPSDWNYVPKKNRQGLRSTRQRRK 329
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: K8YZM2_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YZM2_NANGC)

HSP 1 Score: 155 bits (391), Expect = 2.130e-37
Identity = 101/276 (36.59%), Postives = 130/276 (47.10%), Query Frame = 1 
Query:  397 TPATEGDLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDD----------------------GGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMR----------GRGA-------------------------NAIGRATLELLEA-RGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRR 1050
            TPA++ D+ CIE+RQL H         G     C HGFPQAF F P     +SGLFRLSCPLLV+A+D+ E                        GG+++ N +L     ++ +F  VN  H  +RR LV P+ +    E +G+ G E+ L SGI GV+P K  D KCLHAH+AD L            GRG                          NAIG    E L   R +  +G   C +QCN   E T  SW Y P KNKQ+L++R  RR
Sbjct:  111 TPASDEDIACIEQRQLGHPI----TCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQVALCFRVGSPIHPFPSLPSLPPGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTRTGGGEGKGWGRGGAMLRAKEDVALAYRDISVALLSGYDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRR 382
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: A0A7S0BWE2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWE2_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.150e-33
Identity = 84/222 (37.84%), Postives = 123/222 (55.41%), Query Frame = 1 
Query:  289 VVSASSKRQNSRPVETDELTQAAKDRATALVEAYVSTPATEGDLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEELRADFMAVNLAHGQLRRRLVT--PDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMRGRG--ANAIGRATLELLEA-RGLRTDG 939
            + +A+S    ++P  ++ +T     + T        TP T+ D+ CI + Q+ H   A S  +G     C HG+PQA+   PC +K+S GLFRL+CP+LVQAID+ E  GG+ ++N  + G E+L   F AVN    ++R+ ++   P  M  +   +G   AER L SGI G+ P    D KCLHAHVAD L R     ++ IG+  L LL+  RG+  DG
Sbjct:    2 ITTATSALTTTKPTHSETIT-----KPTKFYTEPFHTP-TKSDIDCIHQHQIHHPIQAFS--IGQK---CTHGYPQAYGNHPCEYKISGGLFRLTCPMLVQAIDEWEARGGVRELNDLVMGSEDLTRSFHAVNQRTVRVRKAVIDAHPGGMEKITSRLGDFNAERLLASGIAGLGPNAGVDVKCLHAHVADQLCRPADDDSDTIGKEILRLLKVERGVAVDG 212
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: K0SY20_THAOC (PseudoU_synth_2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SY20_THAOC)

HSP 1 Score: 139 bits (351), Expect = 1.650e-30
Identity = 90/232 (38.79%), Postives = 123/232 (53.02%), Query Frame = 1 
Query:  415 DLRCIEERQLRHKAGASSASVGVSPNPCRHGFPQAFAFDPC-GHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGDEEL------RADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMR-------------GRGANAIGRATLELLEARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRR 1050
            DL  IE+ Q+ H+         VS +PC HG+PQ+F F P  G K  SGLFRLSCPLLV+AIDQ E +GG+  +   L  D+        +  F   N    ++R+ L   D +S + + +G+  +ERFLDSGI G+   +  + KC+HAHVAD L R              RG N IG   L +L  RG    G + C +QCN   +     W Y P+KN+Q+L+T   RR
Sbjct:  663 DLDVIEQ-QVFHRVDDDQVFC-VSSSPCLHGYPQSFGFHPTKGPKPVSGLFRLSCPLLVEAIDQWEGEGGVRQMTDWLRSDDRFHNASRKQDGFETANRIQKKVRKELARGD-LSYLSKRLGEFNSERFLDSGIAGIPSSQTFNVKCIHAHVADHLCRRSRDLDSADIENADRG-NIIGEHALRILGDRGTEICGNEVCWQQCNCNRKRVDSDWSYRPKKNRQKLKTTSERR 890
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Match: F0YD16_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD16_AURAN)

HSP 1 Score: 140 bits (353), Expect = 1.970e-30
Identity = 92/237 (38.82%), Postives = 123/237 (51.90%), Query Frame = 1 
Query:  367 ATALVEAYVSTPATEGDLRCIEERQLRHKAGASSASVGV-SPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGIEDVNARLAGD----EELRADFMAVNLAHGQLRRRLVT-PDKMSLVEETIGKNGAERFLDSGITGVTPGKVRDAKCLHAHVADALMRGRGANAIGRATLELLEARGLRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRM 1059
            A  +   + + P    D+  IE  QL H+    + ++GV + + CR GFPQA   DP  HK  +GL RL+CP L +AID  E D  +  V+  L  D     + R     VN  H   RR LV   D      E +G++     + SGI G++ GK+ D KCLHA VAD L+ G   NA+G+A L+ L ARG+   G   C EQC+         WRYTP KNKQ+L T K R K +
Sbjct:   29 APEIASRWATRPPAAPDVEAIEAHQLGHR----TQTIGVPAASLCRRGFPQATLQDPSVHKFGAGLVRLTCPHLCEAIDAWERDDAVRTVSKALLVDGADASKHRDSLDRVNARHAATRRSLVEGTDAERRAVERLGEDAFSHAMGSGIAGISQGKLEDVKCLHAQVADELLSG--DNALGKAILDGLGARGVDVAGSPTCHEQCSG----CDGGWRYTPTKNKQKLWTTKRRHKEL 255
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14.3165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3F4_9PHAE8.980e-16274.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLL9_ECTSI2.790e-11591.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S9FG26_9STRA1.920e-4844.84Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2HF12_9STRA1.390e-4543.05Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A8J2S7V2_9STRA8.490e-4241.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2PD55_9STRA7.810e-4040.55Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K8YZM2_NANGC2.130e-3736.59Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S0BWE2_9STRA3.150e-3337.84Hypothetical protein (Fragment) n=2 Tax=Proboscia ... [more]
K0SY20_THAOC1.650e-3038.79PseudoU_synth_2 domain-containing protein (Fragmen... [more]
F0YD16_AURAN1.970e-3038.82Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14contigH-canaliculatus_F_contig14:18176..23804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.1
Seed ortholog evalue3.4e-97
Seed eggNOG ortholog2880.D8LLL9
EggNOG free text desc.Protein of unknown function (DUF501)
EggNOG OGs2C2QW@1,2SDB4@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionProtein of unknown function DUF501
Ec32 orthologEc-04_005280.1
Exons8
Model size2158
Cds size1182
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14.3165.1prot_H-canaliculatus_F_contig14.3165.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14 18200..22852 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929145.2349882-UTR-H-canaliculatus_F_contig14:18175..181991622929145.2349882-UTR-H-canaliculatus_F_contig14:18175..18199Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig14 18176..18199 +
1696845694.769718-UTR-H-canaliculatus_F_contig14:18175..181991696845694.769718-UTR-H-canaliculatus_F_contig14:18175..18199Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig14 18176..18199 +
1622929145.3996477-UTR-H-canaliculatus_F_contig14:22852..238041622929145.3996477-UTR-H-canaliculatus_F_contig14:22852..23804Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig14 22853..23804 +
1696845694.864965-UTR-H-canaliculatus_F_contig14:22852..238041696845694.864965-UTR-H-canaliculatus_F_contig14:22852..23804Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig14 22853..23804 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929145.2510042-CDS-H-canaliculatus_F_contig14:18199..182501622929145.2510042-CDS-H-canaliculatus_F_contig14:18199..18250Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 18200..18250 +
1696845694.7830892-CDS-H-canaliculatus_F_contig14:18199..182501696845694.7830892-CDS-H-canaliculatus_F_contig14:18199..18250Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 18200..18250 +
1622929145.2653453-CDS-H-canaliculatus_F_contig14:18633..188901622929145.2653453-CDS-H-canaliculatus_F_contig14:18633..18890Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 18634..18890 +
1696845694.7944016-CDS-H-canaliculatus_F_contig14:18633..188901696845694.7944016-CDS-H-canaliculatus_F_contig14:18633..18890Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 18634..18890 +
1622929145.2791536-CDS-H-canaliculatus_F_contig14:19638..198521622929145.2791536-CDS-H-canaliculatus_F_contig14:19638..19852Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 19639..19852 +
1696845694.8042834-CDS-H-canaliculatus_F_contig14:19638..198521696845694.8042834-CDS-H-canaliculatus_F_contig14:19638..19852Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 19639..19852 +
1622929145.2927687-CDS-H-canaliculatus_F_contig14:20082..202051622929145.2927687-CDS-H-canaliculatus_F_contig14:20082..20205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 20083..20205 +
1696845694.8132522-CDS-H-canaliculatus_F_contig14:20082..202051696845694.8132522-CDS-H-canaliculatus_F_contig14:20082..20205Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 20083..20205 +
1622929145.3273182-CDS-H-canaliculatus_F_contig14:21441..215881622929145.3273182-CDS-H-canaliculatus_F_contig14:21441..21588Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 21442..21588 +
1696845694.822706-CDS-H-canaliculatus_F_contig14:21441..215881696845694.822706-CDS-H-canaliculatus_F_contig14:21441..21588Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 21442..21588 +
1622929145.3455079-CDS-H-canaliculatus_F_contig14:22015..221971622929145.3455079-CDS-H-canaliculatus_F_contig14:22015..22197Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 22016..22197 +
1696845694.8326502-CDS-H-canaliculatus_F_contig14:22015..221971696845694.8326502-CDS-H-canaliculatus_F_contig14:22015..22197Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 22016..22197 +
1622929145.3580537-CDS-H-canaliculatus_F_contig14:22569..226871622929145.3580537-CDS-H-canaliculatus_F_contig14:22569..22687Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 22570..22687 +
1696845694.844847-CDS-H-canaliculatus_F_contig14:22569..226871696845694.844847-CDS-H-canaliculatus_F_contig14:22569..22687Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 22570..22687 +
1622929145.3749323-CDS-H-canaliculatus_F_contig14:22762..228521622929145.3749323-CDS-H-canaliculatus_F_contig14:22762..22852Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 22763..22852 +
1696845694.854626-CDS-H-canaliculatus_F_contig14:22762..228521696845694.854626-CDS-H-canaliculatus_F_contig14:22762..22852Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14 22763..22852 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14.3165.1

>prot_H-canaliculatus_F_contig14.3165.1 ID=prot_H-canaliculatus_F_contig14.3165.1|Name=mRNA_H-canaliculatus_F_contig14.3165.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=394bp
MVCFRGMIVFLACATSPARKPNVSVFAWTQAVVPARQSTLLGSRSMQGKS
TADRRSPHLGGVKRRWYKSGESSGEKSKDGDDLFRCFAVVSASSKRQNSR
PVETDELTQAAKDRATALVEAYVSTPATEGDLRCIEERQLRHKAGASSAS
VGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDQLEDDGGI
EDVNARLAGDEELRADFMAVNLAHGQLRRRLVTPDKMSLVEETIGKNGAE
RFLDSGITGVTPGKVRDAKCLHAHVADALMRGRGANAIGRATLELLEARG
LRTDGGDRCSEQCNYRVEETADSWRYTPQKNKQRLQTRKVRRKRMNPPGN
KKNRERENNENIVAQQQQQQQQQQQHECHWWQKRRQSRPVGHR*
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mRNA from alignment at H-canaliculatus_F_contig14:18176..23804+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14.3165.1 ID=mRNA_H-canaliculatus_F_contig14.3165.1|Name=mRNA_H-canaliculatus_F_contig14.3165.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5629bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14:18176..23804+ (Hapterophycus canaliculatus Oshoro5f female)
CCCTGCCGTGGCATCTGCTGGGGCATGGTATGCTTTCGTGGAATGATCGT
ATTCTTGGCCTGCGCAACCTCGCCGGTATGTTGATGGATGTTCATTACAC
TTCCCGAGTTGTGATCCCTTCAGAGCATGCTTTGCGAGGTTGTATTCCGC
CGCATGTGCATGTCTAAGTTTGAAATTCAAACCGTCCCGGTTGTAGCTTT
TACACGTTCGCAAATATGAAAGGCGAAGACTTCGGCGTATCGCGATCGCT
TCCCTGGCGCGTCTCAAACCTCAGGACACGCGTACTTTCCGCTACCTAGT
GCCACATTAAGGGGATTTTAGTCTACTTCTCTCCGAGATACTGCTGCAGC
CGCACACGAGAGCCCTCACCTACGAGTATGAATTGAATTCCGAACCGACG
TACAAGCCTACGTCGTTCATGTCACCGCGAATCCACATGACCACCGAACA
AAACGCAGGCTCGGAAGCCCAACGTCTCGGTGTTCGCCTGGACGCAGGCT
GTCGTTCCCGCGCGGCAGTCGACGCTCCTCGGAAGCAGGAGTATGCAAGG
GAAGAGCACAGCAGACAGGAGGTCCCCACATCTGGGCGGTGTGAAGCGGC
GTTGGTACAAGAGTGGAGAAAGTTCCGGGGAGAAGAGCAAGGATGGAGAT
GATCTCTTCCGCTGTTTCGCGGTCGTCTCGGCTTCCAGCAAGAGACAAAA
CTCCAGGCCCGTTGAGTAAGTCAGGGCTAGGCGACGGTGGTCACGGCTTC
CCCGATTTCGCGATTTGACCGAATATTAATCTTTAGAGCCGGCTTTGGAC
TTTGGATACACCCGACAGATGGAATGCCTCCGACGACATCATGTTTTCTT
TTGCTTCTTCACGCAGAACTACTGTACCTCAAAAGGTACCCTGGGCGCAC
CAAACATCGTGAAGACGTATGGAATATTTCGTGATCGCGGGTGTGGAGAT
CGGCTGCCGAGGCCCAGAGAAAATAAAATATTAAGGGGACAATCTCCTGA
CAAGACAGACAATTCGATTAACATTAGGTTGATAGCCGAGTCGGGGCGAG
AACTGATTGCAGGTCGGACTTCGGCCACTGAGTATCCGCACTGATAGCCG
AAAATGACATCGACTTTGTTCGGGTGAACTCTGTATGTGTTGCTGTAGAG
GGGTGCCCAGGCGGGAGTCTGAGTGAAAGGTTCTTCTTCGGGGACCTTTT
TCACACGTCGACCGTCACACGTCGACCGTCCCCTTCATCCAGCTTGTCAC
TACGCTACGTACACCCGACGAGAGGGATGTAGCGTACCACATCCAGCTAT
CTTGTGAGGGGCCGACCAATAAGGGTAACAATGAAGCAGGCCTGAGGCCA
AGCAGGCCTGAGGCCAACGCGACTATCACCGACATGTCCCGGTACCCATG
CGATGGAAACCTGAACCCACATCTGTTGATTTATAGAATCGTGTGACATC
CACATCCACGCAGGACCGATGAGCTGACCCAAGCAGCGAAGGACAGGGCA
ACCGCTCTCGTCGAGGCCTACGTTTCCACCCCGGCAACCGAGGGAGACCT
GCGCTGCATTGAGGAACGACAGCTGCGGCACAAGGCTGGGGCTTCCTCTG
CATCGGTGGGCGTGTCGCCCAATCCCTGCCGACACGGATTTCCGCAGGCG
TTTGCGTTTGATCCCTGTGGGCACAAGGTGCGCCCAGTCCGCAGTGAAAT
GCGCACGATTCCCGCGAATCTTGCGTGTAAAGGTGCAAGTTCGTATTGCG
TGGCTCTTGTCCCCGAAAGCTCGACCTGCCAGAGACCAATGAATTGAGTG
GGGAAACGCGTTGGCGATTGTCCTGGCAACACAGACCACTGCCTTCTTAG
CGATTTGCATTGTGTACTCCTGGCAGCTTCTGACCACGACCGAGGCGTTG
ACGCTAGGTCTCCTCGGGGCTCTTCCGGCTGTCGTGCCCGCTGCTGGTGC
AAGCCATCGACCAGCTGGAAGACGACGGAGGGATCGAGGACGTCAACGCT
AGGCTGGCCGGCGACGAGGAGCTCCGTGCGGTACGCGGTGATGGCTTTTT
TGGCGTGATCAATGTCTTCTTGACCTCAGCAAGATGTGCACATGGCAACA
CCGGCCCTAGGCAGGCGGCGCAGCCGTCCTCTGTACCAAAATCCTCCCCC
TCATACGGAATTCTTCCCCTCTGATGTGGCCTCCTTACAATTTATCTTTC
CGTTAGAATCACCCGAGCGCGACCGCTGTGAGAGCCGTATTTCCTCTCCA
GAAGTTCCGAAATTAAGTGAAGGCCGCTCGCCTCTCTCTCTTTCTCGGCC
TCTCTGCCGCCCACGGCATTTGACTGTCTCTGTCTCTGTCTCTCTGTCTC
TCTCTGCACAATTCAGACTTTCTCTGTTTCTCTCTCTGGCTGTCTCTGTG
TCTCCGTATCTCTCTCTGGGGGCACTCAGCACAACACAAAGGTGTCGCAG
TTTGTTTTATGCGTCATCCGGAAATTTTGGAAATTTTGGGCACTACCCAA
CACCATCATTCTTCCAGCCTCCACAGCTCATTCTCTCTCCCTCTCTTTCT
TTCTTCGTTCCCCTCTCCTTCTCTTCCTCTCTCTGAAGGTACTTCGTAGT
AATCCCCCGTGTCTCATTGCATTTTTGGCCGTAGCGGAAATTAGTGGTGG
CGATGTGGAGCATTCCAACGGCAGTGCCTCTTCTCCTTGAGTCCCGATAA
CCCCATCTTAAGACTCGCAATCCGCAAGGGTCAGCATCTCTCTCCGCCTG
TCTCTGCTGGTGATGGCAGATCTCTCTGACGAAAATAATCATCAGGCGAA
CTCATGCCTTTGTGAGTGTCTTCCCTCCCAGAAACATCTTCAAATTATAT
GACATCATACTTCTACAACACCTTCAGTCACGAAACATTCATCATTGCCT
TGGAATCGCTCACAACTAAGCGGGACTGCGAAGTGGCCAAAAAATTGTTG
TCCGCGGGGTTTTATCGACGGATATTCTGAAGGACAAGTGCTGGAGAGGG
CTTAGTTACCCTGTAGGATACAGGTCAGCACAGCTCTGTTCTACTGGTGC
CGTCCAAAATCACAAGTAACCTGTCGCGTTTGTCTCCACTTATTCGGGGT
GCTTACTTAGTTGAATTCCATTACTGTGGCGATTTACCGCCGTCTGTTTG
CTGCCATGATTCTGTACGATTCGTCTCGCCTCTACCACCGAACCCTGGTC
GCTTTTTCGTCTCATTTACGTTGCGCCCGGGGTGGCGATGATGCGGTGCG
GTGCTGTACTGTGCAGGATTTTATGGCAGTCAACTTGGCTCACGGCCAAC
TTCGACGGCGTCTAGTGACACCGGATAAGATGAGTCTGGTGGAGGAGACC
ATCGGTAAAAACGGGGCAGAGCGTTTCCTTGACAGCGGTATTACTGGCGT
CACCCCGGGTAAGGTATGTACAATGTTTGTTTATTTTTTGTTCTGCGCAG
AGTGGAGACTTTCCCCGGCGAGTTTCGGTGGGTTGCCCGCTTTAGTGCTG
CATGGAAAATCGCCTCCCGGTCTGATTTGTATGTGGCTGCTGTTACTGTT
GTACTTCCGTTGTTTAGAGTAGGTGATGGATCCAGCGACGATCGGCGAAG
TTCTCGGGAAAACATTCCCAACAGCAGACCTGGCTTCAAGGGATTGGCAC
GTCGTGTCCCCGAATCTCGTGTCATTGAAGCTCTTTCTTTTTGAATAATC
TGATACGCAGTCCAGGCATTGTAGAGGACAGCCTTTTTATCCACCACTGT
GCGCCCTCCGTACGTGTTCGTAGGTTGTGCTCCCATCCCCGTTCCTCCCA
AACATTTTGTTCCATTTTCTTTCGCGCACCCGTCACGCAGGTACGCGACG
CGAAGTGTCTCCACGCTCACGTCGCGGACGCTCTCATGCGTGGTAGAGGC
GCCAACGCTATCGGTCGCGCGACCCTGGAGCTGCTCGAAGCGCGAGGGTT
GAGGACGGACGGAGGGGATCGGTGCAGCGAGCAATGCAACTATCGCGTGG
AGGAGACTGCGGACAGCTGGCGGTGAGTACCTTTTTGCGGGATCTCGCAG
ATCGTTTGTCTCCTTGAGTGATGTGGAGATTATGCTTGTTTTGGCTTGAT
TTGGTGACTGCTTGCCGTTGTCCCTCTCATATTGTGTTGTCGCTGTTGTT
GGGGGTTTGGCGTGACGGCGTCGTTGGGGCTGCTGCCAGACGCCGCGCGA
ACCCGTCTGCCCTCCATTGCTCACCCCGCCTCCTTGCATCGCCTTTCTAC
TGCTTCCCAACCGACGAGATACGCTTTCTTACACCGTCTGCACACCTGCA
GCCTATGGCAATGCCTTGTGTGTGGGAAATTGCCTCACCCAACCTCACCA
CTCTCACCCCCCCTTTCCCCTGCCATCTGTTCAATACCTGTCAGCTATAC
GCCTCAGAAGAACAAGCAGAGGCTCCAGACAAGAAAAGTGCGCCGGAAGA
GAATGAACCCACCCGGCAATAAGAAGAACAGGGAGCGGGAGAACAATGAA
AATATTGTCGCCGTTGACGACGGTAGCAGCGATCACAGCGGAAACATTGG
CCTTTGAAACCAGCGAAGATGGCAGTAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCATGAGTGCCACTGGTGGCAGAAGCGGCGG
CAGTCAAGACCGGTTGGCCATCGATAATCGACGGCCTTTTGCTTTTTTTG
TCCGCGGCAGTCTCCAGGGCAGGAGGGCTGCATCTCCTTCCACTTGCGTA
GCTGTAGAGTGCTCGCTGCTGCGTCCCGCGAGATATTCAAACCCGGTGGT
GGCGGGGTTGCCTCGAGAATGGAAACGGCCATACCGCATTGTTGATGACT
TATCACACGGGACGGGGACTTCATCGTTCGAGTGGATACTCAATCAAGAA
GGAGCGTAGACTTTGAACGATCCATGCCAATCCTAGGTGCTGTGAGCTCT
GCTGCCTTGAGAGGAAGAGGCTGGTTCCAGGGGGTGAAAACTCTGTGGCG
CTGCTCAACCACCATATTTTTGGAGGGTGCTTTCACGCATGTCTACGTCT
TGAGGTTTAAACGATGAGTGCCCCCGCCATGCACCTTGTTCGATAGGGCG
GAACTTGTGTAGATGATACGGGTGTCGCAATGGCGAACGAACGGACGGCC
TAGAAAAACACAACGCCGTTTGCCCCCAAGCATCGCGTTCGCCGGACGGA
GGCACACGCGCGGTCCCGGACGCGGGCACCGCCGGAGGGAGAAAAAGTCG
GGGTGCGTTGTCTTAGAACGCGTCTTTGGCACAAGGCGGGAACCAGCGGG
CTTGCAAGATAATATTTGAAATAATTTTGGTTTGAACCAGCAATGCAATT
GCAATATATATCTGAAGCCCTGGACGGGAGTGGAATAAAGCTGTTGCTTG
TAGAGGATCTCGCACGTTGCCGAACAGTTCAAATTATTCGAGACCTGGCT
TAAGGATATACCATAGACTAGGGACGTTCCAGTGGATTCATAAGCATGAG
CGAGACCCGCAGAGCTTCCTTGGAGCTCCTTCACAAGGAGCTGAGACCGA
CTTCCGGTAATATCCTCTGTGAAAGCCCACCCCACAGTGAACGCTCTCAA
CCCCCTTACTAAGACCGTTTCGTTAAGAC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14:18176..23804+

>mRNA_H-canaliculatus_F_contig14.3165.1 ID=mRNA_H-canaliculatus_F_contig14.3165.1|Name=mRNA_H-canaliculatus_F_contig14.3165.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2364bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14:18176..23804+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTATGCTTTCGTGGAATGATCGTATTCTTGGCCTGCGCAACCTCGCC
GATGGTATGCTTTCGTGGAATGATCGTATTCTTGGCCTGCGCAACCTCGC
CGGCTCGGAAGCCCAACGTCTCGGTGTTCGCCTGGACGCAGGCTGTCGTT
CCCGCGCGGCAGTCGACGCTCCTCGGAAGCAGGAGTATGCAAGGGAAGAG
CACAGCAGACAGGAGGTCCCCACATCTGGGCGGTGTGAAGCGGCGTTGGT
ACAAGAGTGGAGAAAGTTCCGGGGAGAAGAGCAAGGATGGAGATGATCTC
TTCCGCTGTTTCGCGGTCGTCTCGGCTTCCAGCAAGAGACAAAACTCCAG
GCCCGTTGAGCTCGGAAGCCCAACGTCTCGGTGTTCGCCTGGACGCAGGC
TGTCGTTCCCGCGCGGCAGTCGACGCTCCTCGGAAGCAGGAGTATGCAAG
GGAAGAGCACAGCAGACAGGAGGTCCCCACATCTGGGCGGTGTGAAGCGG
CGTTGGTACAAGAGTGGAGAAAGTTCCGGGGAGAAGAGCAAGGATGGAGA
TGATCTCTTCCGCTGTTTCGCGGTCGTCTCGGCTTCCAGCAAGAGACAAA
ACTCCAGGCCCGTTGAGACCGATGAGCTGACCCAAGCAGCGAAGGACAGG
GCAACCGCTCTCGTCGAGGCCTACGTTTCCACCCCGGCAACCGAGGGAGA
CCTGCGCTGCATTGAGGAACGACAGCTGCGGCACAAGGCTGGGGCTTCCT
CTGCATCGGTGGGCGTGTCGCCCAATCCCTGCCGACACGGATTTCCGCAG
GCGTTTGCGTTTGATCCCTGTGGGCACAAGGACCGATGAGCTGACCCAAG
CAGCGAAGGACAGGGCAACCGCTCTCGTCGAGGCCTACGTTTCCACCCCG
GCAACCGAGGGAGACCTGCGCTGCATTGAGGAACGACAGCTGCGGCACAA
GGCTGGGGCTTCCTCTGCATCGGTGGGCGTGTCGCCCAATCCCTGCCGAC
ACGGATTTCCGCAGGCGTTTGCGTTTGATCCCTGTGGGCACAAGGTCTCC
TCGGGGCTCTTCCGGCTGTCGTGCCCGCTGCTGGTGCAAGCCATCGACCA
GCTGGAAGACGACGGAGGGATCGAGGACGTCAACGCTAGGCTGGCCGGCG
ACGAGGAGCTCCGTGCGGTCTCCTCGGGGCTCTTCCGGCTGTCGTGCCCG
CTGCTGGTGCAAGCCATCGACCAGCTGGAAGACGACGGAGGGATCGAGGA
CGTCAACGCTAGGCTGGCCGGCGACGAGGAGCTCCGTGCGGATTTTATGG
CAGTCAACTTGGCTCACGGCCAACTTCGACGGCGTCTAGTGACACCGGAT
AAGATGAGTCTGGTGGAGGAGACCATCGGTAAAAACGGGGCAGAGCGTTT
CCTTGACAGCGGTATTACTGGCGTCACCCCGGGTAAGGATTTTATGGCAG
TCAACTTGGCTCACGGCCAACTTCGACGGCGTCTAGTGACACCGGATAAG
ATGAGTCTGGTGGAGGAGACCATCGGTAAAAACGGGGCAGAGCGTTTCCT
TGACAGCGGTATTACTGGCGTCACCCCGGGTAAGGTACGCGACGCGAAGT
GTCTCCACGCTCACGTCGCGGACGCTCTCATGCGTGGTAGAGGCGCCAAC
GCTATCGGTCGCGCGACCCTGGAGCTGCTCGAAGCGCGAGGGTTGAGGAC
GGACGGAGGGGATCGGTGCAGCGAGCAATGCAACTATCGCGTGGAGGAGA
CTGCGGACAGCTGGCGGTACGCGACGCGAAGTGTCTCCACGCTCACGTCG
CGGACGCTCTCATGCGTGGTAGAGGCGCCAACGCTATCGGTCGCGCGACC
CTGGAGCTGCTCGAAGCGCGAGGGTTGAGGACGGACGGAGGGGATCGGTG
CAGCGAGCAATGCAACTATCGCGTGGAGGAGACTGCGGACAGCTGGCGCT
ATACGCCTCAGAAGAACAAGCAGAGGCTCCAGACAAGAAAAGTGCGCCGG
AAGAGAATGAACCCACCCGGCAATAAGAAGAACAGGGAGCGGGAGAACAA
TGAAAATATTGTCGCCCTATACGCCTCAGAAGAACAAGCAGAGGCTCCAG
ACAAGAAAAGTGCGCCGGAAGAGAATGAACCCACCCGGCAATAAGAAGAA
CAGGGAGCGGGAGAACAATGAAAATATTGTCGCCCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCATGAGTGCCACTGGTGGCAGAAGCGGCGGCAG
TCAAGACCGGTTGGCCATCGATAACAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCATGAGTGCCACTGGTGGCAGAAGCGGCGGCAGTCAAGACCGG
TTGGCCATCGATAA
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