mRNA_H-canaliculatus_F_contig14.3164.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A6H5JMA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA6_9PHAE) HSP 1 Score: 427 bits (1099), Expect = 3.830e-143 Identity = 219/282 (77.66%), Postives = 244/282 (86.52%), Query Frame = 1
Query: 70 VMPNLRAMKWYTGEHIRNSPSIVDGMPEALEKEYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLGLPRVDTTLLEMDSTMVAEICDAILSLYDERQPEYAPLVVKDVREKLKQRITSN---AAPSDS 906
MPNLRA K YT + IRNSPS DG+ EALE +YRR T LFIKA+GKELELPVDAVATALVFFH+FFM HSFQ+H+R FV SAC+FLAAKVEES KRVE VMSK WKVW GGR+PP+E+EK+FKRLREKILIAERCVLHTLGFQLTVEHPYS VMSLLKKLFT+G+GA+GGKG +KA NRQLSQAA SFVNDSLLTT+C+QYRP QVAAAVVYLSYLY+GLPRVDTTLLE D T+VA ICD ILSLYDER +A +VV D+R+KLKQRI N AA SD+
Sbjct: 13 TMPNLRATKLYTMDQIRNSPSRKDGVSEALENDYRRTTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGLPRVDTTLLEADVTVVANICDIILSLYDERGAGHATVVVTDLRDKLKQRIMKNTTAAAGSDA 294
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: D8LLM1_ECTSI (Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM1_ECTSI) HSP 1 Score: 385 bits (989), Expect = 5.800e-130 Identity = 193/236 (81.78%), Postives = 212/236 (89.83%), Query Frame = 1
Query: 73 MPNLRAMKWYTGEHIRNSPSIVDGMPEALEKEYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLGLPRVDTTLLEMDSTMVA 780
MPNLRA K YT + IRNSPS DG+ EALE +YRRKT LFIKA+GKELELPVDAVATALVFFH+FFM HSFQ+H+R FV SAC+FLAAKVEES KRVE VMSK WKVW GGR+PPAE+EK+FKRLREKILIAERCVLHTLGFQLTVEHPYS VMSLLKKLFT+G+GA+GGKG +KA NRQLSQAA SFVNDSLLTT+C+QYRP QVAAAVVYLSYLY+GLPRVDT LLE D T+VA
Sbjct: 1 MPNLRATKLYTVDQIRNSPSRKDGVSEALENDYRRKTGLFIKAAGKELELPVDAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPAENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGLPRVDTMLLEADVTVVA 236
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A6V1NFC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NFC1_HETAK) HSP 1 Score: 182 bits (461), Expect = 3.340e-50 Identity = 102/219 (46.58%), Postives = 137/219 (62.56%), Query Frame = 1
Query: 82 LRAMKWYTGEHI--RNSPSIVDGMPEALEKEYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLGL 732
+ WY + I RNSPS DG+ E EK YRRKT FI +G L+LP VATA VFFHRFF R SF++HDR VA+AC+ LA KVEESPK++E V + C V G + + + K +EKIL ER +LHT+GF + +EHPY ++ + KKL +G GG + A RQ +Q A +FVNDS T++C+++ P VAA V+L+ L+ GL
Sbjct: 1 MEGSSWYFSDDILRRNSPSRKDGISEEREKGYRRKTCFFIDEAGNSLKLPKLTVATAHVFFHRFFARQSFKQHDRFDVAAACLHLAGKVEESPKKLEVVAATCHAVRHRGAKTLEKESEESKIAKEKILTCERILLHTMGFDMCIEHPYKYLIEVCKKL--KNKGIIGGN-QDDAGGRQFAQTALNFVNDSFRTSLCLRHPPPLVAAGAVFLAALFAGL 216
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A1E7FTI4_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTI4_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.370e-43 Identity = 85/204 (41.67%), Postives = 130/204 (63.73%), Query Frame = 1
Query: 127 PSIVDGMPEALEKEYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKA--FKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLGL 732
PSI GM E RRKT FI+ +G+ L+LP A++TA+VFFHRF+ +H+FQ HDR VA A + LAAK EE+PK++ V+ +C+K+ R A H K F +L+E+IL+ ER +LHT+GF+L+++HPY + ++KKL + + N +L Q + S NDS T++C+Q+ P ++A A VYL+ ++ G+
Sbjct: 1 PSITKGMSSIEEAMKRRKTCRFIEEAGRVLKLPRVAISTAMVFFHRFYAKHAFQEHDRFEVAVAALVLAAKTEEAPKKLNTVIQECYKL--KARAMQAGHTKGEDFLKLKERILLLERIILHTIGFELSIDHPYKFFVDMIKKLIIMSKMMN-----------ELVQYSMSTANDSYQTSLCLQFGPKEIATACVYLACMFSGV 191
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A7S0PZF2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA) HSP 1 Score: 165 bits (417), Expect = 7.510e-43 Identity = 94/225 (41.78%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 85 RAMKWY-TGEHIRNSPSIVDGMPEA---LEK------EYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLG 729
R W+ T E I NSPS + +A LEK EYRR T F++ SG++L LP +ATA+VF+HRFF S++ +DR +A+ C+FLA+KVEE+PK+++ V+++ +K+ + P + FK L+E+IL++ER +L TLGF LTVEHPY +++ +K + +G R L+Q A +F+NDSL TT+C+QY P V+AA V L+ YL
Sbjct: 17 RVESWFLTKEQIENSPSRKYLLSKANGDLEKAKHKETEYRRLTCAFLQESGQKLRLPQLTIATAIVFYHRFFAHKSYEGYDRFTIATTCLFLASKVEETPKKLKDVVTETYKIQNAPKAAPEPESQDFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSI----QGT-----------RDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVALAARYLS 226
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A7S2B1V0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1V0_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.600e-42 Identity = 86/245 (35.10%), Postives = 148/245 (60.41%), Query Frame = 1
Query: 97 WYTG-EHIRNSPSIVDGMPEALEKEYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKA-FKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLGLPRVDTT-----LLEMDSTMVAEICDAILSLY 810
W G + +R SPS D + E EK RR+TA++++ +G+ L+ P +ATA VFFHRF+ SF++ R +A C+FLA KVEE P+++E V+ C ++W +P + ++ LR IL ER +LHT+ F L V+HPY ++ +KKL G + + + R+ +Q+A +F+NDS+ T++C+Q+ P ++A+A +YL+ +Y+ + + + LE++ +A IC+ I+ +Y
Sbjct: 4 WILGPDFLRQSPSRADNISEEDEKRCRRRTAIYMEKAGEHLKFPRLTIATAQVFFHRFYALQSFKKFRRFDIAVTCLFLAGKVEEYPRKLESVIQMCHQIWNKLDKPTLNPDSQDYEFLRLTILRTERQILHTIAFDLCVKHPYKDLIDTVKKLHQAGL-------IEEKQKREFAQSALNFLNDSMRTSICLQFEPKKIASATIYLATVYMNMNKPEENPDWMKKLEINHQELASICEQIMEVY 241
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A1Z5JU78_FISSO (Cyclin T n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU78_FISSO) HSP 1 Score: 160 bits (406), Expect = 5.540e-42 Identity = 102/280 (36.43%), Postives = 163/280 (58.21%), Query Frame = 1
Query: 103 TGEHIRNSPSIVDGMPEALEKEYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKV-WQGGR------EPPAEHEKA--FKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFT----LGRGANGGKGVNKARNRQ------LSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLGLPRVDTT------LLEMDSTMVAEICDAILSLYDERQPEYAPLVVKDVREKL 867
T I PS+ DGM E RRKT FI+ SG+ L+LP A+ATA+VFFHRF+ +HSF +HDR VA AC+ LAAK EESPK++ V+ +C K+ W+G + +PP K F +L+E++L+ ER +LHT+GF+L+++HPY ++ +K+L + + + G++ + +Q + Q A +F NDS+ T++C+Q+ P ++A VYL+ + L + + LL +D + I ++ L ER+ P V+ V+E+L
Sbjct: 4 TSFDISQLPSLQDGMSIQEESMKRRKTCRFIEESGRILKLPRVAIATAMVFFHRFYAKHSFAQHDRFEVAVACLLLAAKTEESPKKLVVVLEECQKLKWRGMQAGSASVKPPDLDPKGEEFSKLKERVLLLERVILHTIGFELSIDHPYKFLVEQIKQLVQGKKLIYQNNHTPVGLSSPQQQQQHMMNEMVQLAMNFANDSMHTSLCLQFDPKKIALTCVYLAAQFGHLMPANESDDWCDSLLSIDPASLVSIALQLIELIAERKGS-DPTVLNQVKERL 282
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A7S0J0B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0B8_9EUKA) HSP 1 Score: 158 bits (400), Expect = 2.410e-40 Identity = 104/304 (34.21%), Postives = 167/304 (54.93%), Query Frame = 1
Query: 97 WY-TGEHIRNSPS---IVDGMPEALEK------EYRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLG--------LPRVDT----TLLEMDSTMVAEICDAILSLYDERQPEYAPLV--------VKDVREKLKQRITSNAAPSDSVRAA 918
W+ T E I +SPS ++ +EK +YRR T F++ SG++L LP +ATA+VF+HRFF S++ R +A+ C+FLA+KVEE+PK+++ V+ + +K+ + PP + FK L+E+IL++ER +L TLGF LTVEHPY +++ +K + +G R L+Q A +F+NDSL TT+C+QY P V+AA V L+ YL LP+ + + V ++ I+ LY+ +Q P + + R ++++ T+ AA S + AA
Sbjct: 23 WFLTKEQIDSSPSRKYLLKKCGNDVEKAHNSETQYRRLTCAFLQESGQKLRLPQLTIATAIVFYHRFFAHKSYESFCRFTIATTCLFLASKVEETPKKLKDVVIETFKIQNTPKPPPEPDSQEFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSI----QGT-----------RDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVSLAARYLSDRHGNLLKLPKHNDGEWHDAFHVSDASVQDVSKQIMELYESKQINGGPALANGSHVALMSQKRAEIERAATTTAADSPTGAAA 311
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A7S4F3M7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3M7_CHRCT) HSP 1 Score: 157 bits (398), Expect = 7.170e-40 Identity = 91/221 (41.18%), Postives = 139/221 (62.90%), Query Frame = 1
Query: 97 WY-TGEHIRNSPS-------IVDGMPEALEKE--YRRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYLG 729
W+ T I NSPS + +A EKE +RR T F++ SG++L LP ++ATA+VF+HRFF S++ + R +A+ C+FLA+KVEE+PK+++ V+ + +++ Q GR+ P + FK L+E+IL++ER +L TLGF LTVEH Y +++ +K + +G R L+Q A +F+NDSL TT+C+QY P V+AA VYL+ YL
Sbjct: 35 WFLTKSQIDNSPSRKYLLERCGGDVVKAREKEAQHRRLTCAFLQESGQKLRLPQLSIATAIVFYHRFFAHKSYENYCRFTIATTCLFLASKVEETPKKLKDVVIETYRI-QHGRQAPDPESQEFKDLKERILVSERVLLQTLGFDLTVEHAYRPLLAYVKSI----QGT-----------RDLAQVAWNFINDSLRTTICLQYAPRHVSAAAVYLAARYLS 239
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Match: A0A7S3BI51_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BI51_9EUKA) HSP 1 Score: 158 bits (399), Expect = 1.050e-39 Identity = 105/291 (36.08%), Postives = 156/291 (53.61%), Query Frame = 1
Query: 40 GGGTPGN----AGSVMPNLRAMKWYTGEHIRNSPSIVDGMPE-------ALEKEY--RRKTALFIKASGKELELPVDAVATALVFFHRFFMRHSFQRHDRVFVASACVFLAAKVEESPKRVEHVMSKCWKVWQGGREPPAEHEKAFKRLREKILIAERCVLHTLGFQLTVEHPYSTVMSLLKKLFTLGRGANGGKGVNKARNRQLSQAANSFVNDSLLTTVCIQYRPSQVAAAVVYLSYLYL------GLPRVDTT-------LLEMDSTMVAEICDAILSLYDERQPEYA 834
GGG G+ +GS + ++T E I SPS + + A EKE RR T F++ SG++L LP ++ATA++F HRFF R S++ +DR VA+ C+FLA+KVEE+PK+++ V+S+ +KV P K F L+EKIL+ ER +L L F L+VEH Y +++ +K + KG R L+Q A +F+NDSL TTVC+QY P +AAA L+ Y+ G DT + ++A+I IL +Y+ +P A
Sbjct: 11 GGGRGGDXXXXSGSASREKQTSWYFTKEQIEKSPSRAYFLKKTQGDEAAAREKELTMRRLTCAFLQESGQKLRLPQLSIATAIIFLHRFFARESYEHYDRFIVATTCLFLASKVEETPKKLKDVVSETYKVHHSKDRGPEPESKEFFELKEKILVCERILLQALAFDLSVEHAYRPLLAYVKSI----------KGT-----RDLAQIAWNFINDSLRTTVCLQYAPRCLAAAAADLAAKYIKTDSGKGFALPDTPQGQKWYHAFQATEEVIADISSQILEMYESNKPGQA 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14.3164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14.3164.1 >prot_H-canaliculatus_F_contig14.3164.1 ID=prot_H-canaliculatus_F_contig14.3164.1|Name=mRNA_H-canaliculatus_F_contig14.3164.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=485bp PPLYPSFGSTSPHGGGTPGNAGSVMPNLRAMKWYTGEHIRNSPSIVDGMPback to top mRNA from alignment at H-canaliculatus_F_contig14:1131..8991+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14.3164.1 ID=mRNA_H-canaliculatus_F_contig14.3164.1|Name=mRNA_H-canaliculatus_F_contig14.3164.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7861bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14:1131..8991+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14:1131..8991+ >mRNA_H-canaliculatus_F_contig14.3164.1 ID=mRNA_H-canaliculatus_F_contig14.3164.1|Name=mRNA_H-canaliculatus_F_contig14.3164.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2910bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14:1131..8991+ (Hapterophycus canaliculatus Oshoro5f female)back to top |