prot_H-canaliculatus_F_contig1399.3158.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1399.3158.1
Unique Nameprot_H-canaliculatus_F_contig1399.3158.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length70
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1399.3158.1 vs. uniprot
Match: D7FYA3_ECTSI (TFIIIC_sub6 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA3_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 3.660e-16
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0 
Query:    1 MYGGKAEPIIGTTMSFTTPKPGSSGREPLVLASFSNTRVTFSQPP 45
            +Y G AEPIIGTTM+FTTPKPG+SGREPL LA FSN ++ FSQPP
Sbjct:   51 VYEGNAEPIIGTTMAFTTPKPGASGREPLELACFSNMKMAFSQPP 95
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1399.3158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYA3_ECTSI3.660e-1675.56TFIIIC_sub6 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1399contigH-canaliculatus_F_contig1399:9136..10186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1399.3158.1mRNA_H-canaliculatus_F_contig1399.3158.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1399 8634..14068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1399.3158.1 ID=prot_H-canaliculatus_F_contig1399.3158.1|Name=mRNA_H-canaliculatus_F_contig1399.3158.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=70bp
MYGGKAEPIIGTTMSFTTPKPGSSGREPLVLASFSNTRVTFSQPPGDHRC
VLSGERDLRKEFDRLSDSA*
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