prot_H-canaliculatus_F_contig1398.3153.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1398.3153.1
Unique Nameprot_H-canaliculatus_F_contig1398.3153.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length718
Homology
BLAST of mRNA_H-canaliculatus_F_contig1398.3153.1 vs. uniprot
Match: A0A6H5KWI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWI4_9PHAE)

HSP 1 Score: 553 bits (1426), Expect = 7.760e-185
Identity = 480/786 (61.07%), Postives = 534/786 (67.94%), Query Frame = 0
Query:    1 MRPRFRDTCGA--LLGCCLLVAL--LSALPGGEAFLSPASVRERSASSLKGGLSASKVQKHRRPSASRGVERRMAGNGGEELQTGETAPFDEDENAS------------------------------SSSSIASIPARRGRFHRQALEAGS---------EAAGEVLSEVGE---------------------ALDGSEILATDSGSEMEGGVGGMTATTDGVAVASTPQGVNKAGSGGVSSVELIKTEILENKEVIAVVVAGVAGSRYLLVKAGGKPGRGSGRGRRRRGGGKGVSPKSPFAGIGQPRVSPEVAAADLKKKADSLKSIDFDVDEDLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSTF-----YSKKPEKSKRKGAPILNLFKRDSGPQRATTMADALAAETADVAVFRQALAAVLARSAPPGAFNVKEPSLLEEVSFTPEDFEGEAGVKAAQTSRVSALSQLMERAGLSLQEGAHVVADVVNAMVVKLTDXXXXXXXXXXXXXXXXALLKYMDGAGELFVALCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQMVSLDRLQDLFSIKKSKADSITQKIMMDLMMKMMSEGDGEGGDAENLEKMMAAXXXXXXXXXXXXXXXXGARSPEDHKKEVEALKAMVDSGDCPKEEVDALRKMYTDAGMDIDTLVNDPMMESSMDADAKEVVVLLRKLLALWPKK 717
            MRP FRD  G   L G CL+V +  LS  PGGEAFL PA+V+        G  ++ K+ + R    +RG+    AG     ++ G       DEN+S                              S+ +  S  A  GR  R A E  S          A GEV+  VGE                     AL+G E    ++GSE    VGG+  TT      +T +   +A  GGVS+V ++K  ++ENKEV+AVVVAGV GSRYLLV+ GGK                  +PKSP AGIGQPRVSPEVAAADLKK+ADSLKS +FDVD DLF            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          YS KPEKSKRK  PIL+LFKRD+GPQR+TTM +AL+ E+ +VA FR+ LAAVLA SAP G F+V+EP+LL E +  PEDFEGEAGVKAA  SR+SAL +LME AGLSL++GA VVADVVNAMVVKLTD                ALLKYMD AG LFV LCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQM+SLDRLQDLFSIKKSKADSITQKIMMDLMMKMMSEG GE GDAE LEKMMAA      XXXXXXX     RSPEDHK+EVEALK MV+SGDCPKEEVDALRKMYTDAG+DIDTLVNDP ME+SMDADAKEVVVLLRKLL LWPKK
Sbjct:    1 MRPAFRDAMGGGVLGGTCLMVIVMVLSVAPGGEAFLHPAAVQRH------GAAASGKMLQQRPAVKTRGIGSMTAG-----VEEGMLDVASRDENSSVTRSTPGPLLRVRSLFGRKAATAAAVSALVSAGAPGSAEALFGRGGRSAPEMPSVPALEQQLETAVGEVVEGVGEIASAVDKXXXXXXXXXXXXEEALEGLET--PEAGSEGGDAVGGLVTTTP-----ATEEDQGRA-VGGVSTVGIVKDLVVENKEVVAVVVAGVIGSRYLLVQRGGKXXXXXXXXXXXXXXXXXXAPKSPLAGIGQPRVSPEVAAADLKKRADSLKSANFDVDLDLFGDAVADLPARPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSIKPEKSKRK--PILSLFKRDTGPQRSTTMQEALSDESPNVADFRRGLAAVLAESAPKGEFDVEEPTLLAEATIVPEDFEGEAGVKAAAASRMSALKELMETAGLSLEQGAEVVADVVNAMVVKLTDAAVSSKGVDSTAAASNALLKYMDEAGALFVTLCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQMMSLDRLQDLFSIKKSKADSITQKIMMDLMMKMMSEGGGEDGDAEGLEKMMAAMGGMEGXXXXXXXG--AGRSPEDHKREVEALKQMVESGDCPKEEVDALRKMYTDAGLDIDTLVNDPNMEASMDADAKEVVVLLRKLLDLWPKK 763          
BLAST of mRNA_H-canaliculatus_F_contig1398.3153.1 vs. uniprot
Match: A0A835Z1E0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E0_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.990e-38
Identity = 132/357 (36.97%), Postives = 191/357 (53.50%), Query Frame = 0
Query:  366 PPSTFYSKK-PEKSKRK-GAPILNLFKRDSGPQRATTMADALAA-ETADVAVFRQALAAVLARSAPPGAFNVKEPSLLEEVSFTPEDFEGEAGVKAAQTSRVSALSQLMERAGLSLQEGAHVVADVVNAMVVKLTDXXXXXXXXXXXXXXXXA-LLKYMDGAGELFVALCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQMVSLDRLQDLFSIKKSKADSITQKIMMDLMMKMMSEGDGEGGDAENLEKMMAAXXXXXXXXXXXXXXXXGARSPEDHK--KEVEALKAMVDSGDCPKEEVDALRKMYTDAGMDIDTLVNDPMM-ESSMDADAKEVVVLLRKLLALWP 715
            PPS   ++  PE  K+K G  +  LFK+ +   R TT+ DA++A E   +  F QALA  L+  APPG+F   +P+ L +        EG              L +L+  +G +  + A  +ADVVNAMVV LTD                + LL YMD AG  F A+CPG+ALDP ++YNG  K+ +LE+++E   ++ +     +      +RL+D+ +IK+SKA S+ QK++M+++ KMM EG    GD          XXXXX           G   PE  +   ++EA KAMV  G+  ++EV  LRKMY D GMDID +V +    ES+MD +AKE+  LLR++L   P
Sbjct:  227 PPSAMEAQAAPEPPKKKLGLGLGGLFKKGAASNRPTTIGDAISAQEGGGLEGFSQALAGYLSHFAPPGSF-APDPTFLRDGELDRAGAEG-------------TLLELVSSSGATSLQVADAIADVVNAMVVGLTDAAVAAIKDEDRCRQALSDLLLYMDNAGGTFAAVCPGVALDPPLRYNGAAKKRQLEELYENFTRAMVTDQSAD-MSARQERLRDMLNIKESKARSLEQKVLMEVVQKMMKEG----GDXXXXXXXXXXXXXXXE----------GGGMPEGPEVAAQLEAFKAMVKDGNVSRDEVTELRKMYKDMGMDIDQMVAESAAAESTMDREAKELYSLLRQMLEQHP 554          
BLAST of mRNA_H-canaliculatus_F_contig1398.3153.1 vs. uniprot
Match: H6WBA5_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA5_VAULI)

HSP 1 Score: 118 bits (296), Expect = 6.830e-25
Identity = 78/244 (31.97%), Postives = 125/244 (51.23%), Query Frame = 0
Query:  482 AHVVADVVNAMVVKLTDXXXXXXXXXXXXXXXX--ALLKYMDGAGELFVALCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQMVSLDRLQDLFSIKKSKADSITQKIMMDLMMKMMSEGDGEGGDAENLEKMMAAXXXXXXXXXXXXXXXXGARSPE-----DHKKEVEALKAMVDSGDCPKEEVDALRKMYTDAGMDIDTLVNDPM-MESSMDADAKEVVVLLRKLLALWPKK 717
            A  +A + N M+ +L D                   L+++M  +G +F A+CPGI LDP ++YNG  K+ +LE+++ A+  +++ S   E  M     ++DL  IK+ KA +I QK MMD +  M+ +G G+G   E +  ++                  G   PE     + + ++E+ K +V  G   +EEV  LRKMY + GMDID LV +    E  MDA  +E+  LLR++L+ +P K
Sbjct:  185 AEAIACIANPMINELVDAAVAANQKSPPACEEALMGLVRFMKVSGSVFEAVCPGIVLDPPLRYNGGSKKKQLEEIY-ASLSASISSENSEELMSFQKEIRDLLGIKEFKAKAIEQKAMMDALQNMVKDGGGDGSSQEQMAALLQ------------NIGANGGPEPEMPSGPEMEAQLESFKNLVKGGQVTEEEVKELRKMYKEMGMDIDKLVKESEGNEGMMDAQGRELFDLLRQMLSQYPLK 415          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1398.3153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWI4_9PHAE7.760e-18561.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z1E0_9STRA7.990e-3836.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBA5_VAULI6.830e-2531.97Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..717
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.859
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1398contigH-canaliculatus_F_contig1398:13602..25885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1398.3153.1mRNA_H-canaliculatus_F_contig1398.3153.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1398 13602..25885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1398.3153.1 ID=prot_H-canaliculatus_F_contig1398.3153.1|Name=mRNA_H-canaliculatus_F_contig1398.3153.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=718bp
MRPRFRDTCGALLGCCLLVALLSALPGGEAFLSPASVRERSASSLKGGLS
ASKVQKHRRPSASRGVERRMAGNGGEELQTGETAPFDEDENASSSSSIAS
IPARRGRFHRQALEAGSEAAGEVLSEVGEALDGSEILATDSGSEMEGGVG
GMTATTDGVAVASTPQGVNKAGSGGVSSVELIKTEILENKEVIAVVVAGV
AGSRYLLVKAGGKPGRGSGRGRRRRGGGKGVSPKSPFAGIGQPRVSPEVA
AADLKKKADSLKSIDFDVDEDLFGDAVSDLPSRPPPPAPPAAEPSPSPSE
AMKESFITEAAEHADEAAAAAAAAAAAEVAADGTAAANADYAVSAANAAT
PELAPAAAPVAEPAPPPSTFYSKKPEKSKRKGAPILNLFKRDSGPQRATT
MADALAAETADVAVFRQALAAVLARSAPPGAFNVKEPSLLEEVSFTPEDF
EGEAGVKAAQTSRVSALSQLMERAGLSLQEGAHVVADVVNAMVVKLTDAA
VASKDDASIATASDALLKYMDGAGELFVALCPGIALDPQIKYNGTYKRGK
LEKVFEAAAKSTLKSMGDEGQMVSLDRLQDLFSIKKSKADSITQKIMMDL
MMKMMSEGDGEGGDAENLEKMMAAMGGAEGMGGMGGMPGMGARSPEDHKK
EVEALKAMVDSGDCPKEEVDALRKMYTDAGMDIDTLVNDPMMESSMDADA
KEVVVLLRKLLALWPKK*
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