mRNA_H-canaliculatus_F_contig1397.3144.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1397.3144.1
Unique NamemRNA_H-canaliculatus_F_contig1397.3144.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 4.670e-136
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 
Query:   19 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS
Sbjct:    1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 201
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.810e-123
Identity = 183/205 (89.27%), Postives = 194/205 (94.63%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            MA+N+SKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRFNF DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV+V+GKLRAQRAK+MKFRDGYMIKSG  + +YVD+AVRHV+MRQGVLGV VSIMLPHDPTGK GPK PLS
Sbjct:    1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVVVSGKLRAQRAKSMKFRDGYMIKSGAAQREYVDYAVRHVLMRQGVLGVKVSIMLPHDPTGKTGPKIPLS 205
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA)

HSP 1 Score: 352 bits (903), Expect = 1.560e-121
Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            M TN+SKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRF+FPD+AVELYAERVA RGLCAQTQAESLKYKL+GGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRA RAKAMKF DGYMIKSGR   DYVD AVRHV MRQG+LGV V IMLPHDPTGKEGPKTPLS
Sbjct:    1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYAERVAVRGLCAQTQAESLKYKLVGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAARAKAMKFADGYMIKSGRATVDYVDRAVRHVAMRQGMLGVIVRIMLPHDPTGKEGPKTPLS 205
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: A0A6V2VE19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VE19_HETAK)

HSP 1 Score: 350 bits (898), Expect = 9.650e-121
Identity = 180/205 (87.80%), Postives = 193/205 (94.15%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            MA N+SKKRKFVADGVFYAELNELLT+ELAE+GYAG+EVR TP+RTEIII ATR Q+VLGEKGQRIRELTSVVQKRFNF DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRAQRAKAMKFRDGYMIKSG+  +DYVD+AVRHV+MRQGVLGV VSIM+ HDP+GK GPK PLS
Sbjct:    1 MAPNISKKRKFVADGVFYAELNELLTRELAEDGYAGLEVRTTPIRTEIIIRATRTQSVLGEKGQRIRELTSVVQKRFNFNDDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAQRAKAMKFRDGYMIKSGQASKDYVDYAVRHVLMRQGVLGVKVSIMMQHDPSGKTGPKKPLS 205
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA)

HSP 1 Score: 342 bits (877), Expect = 2.670e-117
Identity = 172/205 (83.90%), Postives = 189/205 (92.20%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            M TN+SKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRFNFPD  VEL+AE+VA RGLCAQ QAESLKYKLLGGLAVRRACYGVLRF+ME GAKGAEVIV+GKLRAQRAK+MKF+DGYMIKSG+ + +YVD+AVRHV+MRQGVLGV V IMLPHDP GK GPK  LS
Sbjct:    1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQGVLGVKVKIMLPHDPAGKIGPKAKLS 205
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: F0YDG3_AURAN (KH type-2 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDG3_AURAN)

HSP 1 Score: 330 bits (847), Expect = 6.500e-113
Identity = 172/205 (83.90%), Postives = 187/205 (91.22%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            MAT +SKKRKFVADG+FYAELNELLT+ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRACYGV+RF+MESGAKG EV+V+GKLRAQRAKAMKF DGYMIK+G  + +YVD AVRHV+MRQGVLGV VSIMLPHD +GK GPK  L+
Sbjct:    1 MAT-ISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGVKVSIMLPHDASGKTGPKNTLA 204
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: A0A7S2RY40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY40_9STRA)

HSP 1 Score: 326 bits (836), Expect = 5.540e-111
Identity = 169/208 (81.25%), Postives = 185/208 (88.94%), Query Frame = 1 
Query:    4 TMAT--NMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLS 621
            TMA   N+SKKRKFVADGVFYAELNE L +ELAEEGYAGVE+R TP+RTEIII ATR Q+VLGEKG+RIRELTSVVQKRFNF D AVELYAERVA +GLCAQ QAESLKYKL+GGLAVRRACYGVLRFIMESGA GAEV V+GK R QRAKAMKF+DGYMIK+G+V ++YVD AVRHV+MR GVLGV V IMLPHDP G +GPKTPLS
Sbjct:   16 TMANTQNISKKRKFVADGVFYAELNEFLIRELAEEGYAGVEIRATPIRTEIIIRATRTQSVLGEKGRRIRELTSVVQKRFNFADGAVELYAERVANKGLCAQAQAESLKYKLIGGLAVRRACYGVLRFIMESGANGAEVTVSGKARGQRAKAMKFQDGYMIKTGKVAQEYVDTAVRHVLMRLGVLGVRVEIMLPHDPKGIQGPKTPLS 223
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: M4B627_HYAAE (KH type-2 domain-containing protein n=26 Tax=Eukaryota TaxID=2759 RepID=M4B627_HYAAE)

HSP 1 Score: 326 bits (835), Expect = 7.870e-111
Identity = 165/204 (80.88%), Postives = 183/204 (89.71%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPL 618
            MA N+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTP+RTEIII ATR Q VLGEKGQRIR LTSVVQKRFNFPD AVELYAERVA RGLC+Q QAESLKY+LLGGLAVRRACY V+RF+ME+GAKG +VIV+GKLRAQRAKAMKF +GYM+K+G   ++YVD AVRHVMMRQGVLGV VSIMLPHDPTGK+GPK  L
Sbjct:    1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVMMRQGVLGVKVSIMLPHDPTGKQGPKRAL 204
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: A0A484KS08_9ASTE (30S ribosomal protein S3, chloroplastic n=4 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KS08_9ASTE)

HSP 1 Score: 324 bits (831), Expect = 2.260e-110
Identity = 164/204 (80.39%), Postives = 184/204 (90.20%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPL 618
            MAT MSKKRKFVADGVFYAELNELLT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+RIRELTSVVQKRF F ++ VELYAE+V  RGLCA  QAESL+YKLLGGLAVRRACYGVLRF+MESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+  ++Y+D AVRH++MRQGVLG+ V IML HDP GK GPKTPL
Sbjct:    1 MATQMSKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFEENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDTAVRHILMRQGVLGIKVKIMLAHDPQGKNGPKTPL 204
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BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Match: A0A024UIL6_9STRA (40S ribosomal protein S3 n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UIL6_9STRA)

HSP 1 Score: 322 bits (825), Expect = 1.920e-109
Identity = 165/204 (80.88%), Postives = 184/204 (90.20%), Query Frame = 1 
Query:    7 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPL 618
            MA N+SKKRKFVADGVF+AELNELL +ELAE+GYAGVEVRVTPLRTE+II AT+ Q VLGEKGQRIRELTSVVQKRFNF D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRA  GVLRF++E+GAKG EVIV+GKLRAQRAKAMKF++G+M+K+G   ++YVD AVRHV+MRQGVLGV VSIMLPHDPTG+ GPK  L
Sbjct:    1 MALNISKKRKFVADGVFFAELNELLQRELAEDGYAGVEVRVTPLRTEVIIRATKTQEVLGEKGQRIRELTSVVQKRFNFADGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRAAMGVLRFVLEAGAKGCEVIVSGKLRAQRAKAMKFKEGFMVKTGDANKEYVDTAVRHVLMRQGVLGVKVSIMLPHDPTGRMGPKRNL 204
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1397.3144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B0_ECTSI4.670e-136100.00KH type-2 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2UUD3_9STRA1.810e-12389.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGW2_9STRA1.560e-12188.29Prokaryotic type K homology domain-containing prot... [more]
A0A6V2VE19_HETAK9.650e-12187.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TS51_9STRA2.670e-11783.9040s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae... [more]
F0YDG3_AURAN6.500e-11383.90KH type-2 domain-containing protein n=2 Tax=Pelago... [more]
A0A7S2RY40_9STRA5.540e-11181.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
M4B627_HYAAE7.870e-11180.88KH type-2 domain-containing protein n=26 Tax=Eukar... [more]
A0A484KS08_9ASTE2.260e-11080.3930S ribosomal protein S3, chloroplastic n=4 Tax=Co... [more]
A0A024UIL6_9STRA1.920e-10980.8840S ribosomal protein S3 n=8 Tax=Saprolegniaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1397contigH-canaliculatus_F_contig1397:13896..17133 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score393.7
Seed ortholog evalue5.4e-107
Seed eggNOG ortholog2880.D7G6B0
Preferred nameRPS3
KEGG koko:K02985
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
GOsGO:0000054,GO:0000056,GO:0000184,GO:0000226,GO:0000302,GO:0000702,GO:0000956,GO:0001726,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002181,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003723,GO:0003729,GO:0003735,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005783,GO:0005789,GO:0005791,GO:0005819,GO:0005829,GO:0005840,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008017,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008534,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0017148,GO:0019104,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019866,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030054,GO:0030155,GO:0030162,GO:0030425,GO:0030544,GO:0030684,GO:0030686,GO:0030688,GO:0030867,GO:0031072,GO:0031090,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031334,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032069,GO:0032070,GO:0032071,GO:0032075,GO:0032077,GO:0032079,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032356,GO:0032357,GO:0032358,GO:0032587,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032886,GO:0032944,GO:0032946,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0033750,GO:0034097,GO:0034248,GO:0034249,GO:0034399,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0036477,GO:0042102,GO:0042104,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044390,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0045738,GO:0045739,GO:0045785,GO:0045859,GO:0045860,GO:0045862,GO:0045934,GO:0045935,GO:0045937,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050657,GO:0050658,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051018,GO:0051029,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051495,GO:0051536,GO:0051540,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051879,GO:0052547,GO:0052548,GO:0055044,GO:0060255,GO:0060548,GO:0061481,GO:0065007,GO:0065009,GO:0070013,GO:0070181,GO:0070301,GO:0070302,GO:0070304,GO:0070507,GO:0070663,GO:0070665,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0070972,GO:0071159,GO:0071166,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071426,GO:0071428,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0090305,GO:0097064,GO:0097100,GO:0097159,GO:0097237,GO:0097447,GO:0097458,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120038,GO:0140078,GO:0140097,GO:1900117,GO:1900119,GO:1901214,GO:1901215,GO:1901222,GO:1901224,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902229,GO:1902231,GO:1902531,GO:1902533,GO:1902544,GO:1902546,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903320,GO:1903321,GO:1903506,GO:1905051,GO:1905053,GO:1990089,GO:1990090,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2001020,GO:2001021,GO:2001022,GO:2001056,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244,GO:2001270,GO:2001272
EggNOG free text desc.oxidized purine nucleobase lesion DNA N-glycosylase activity
EggNOG OGsCOG0092@1,KOG3181@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein S3, C-terminal
Ec32 orthologEc-10_001190.1
Exons7
Model size622
Cds size615
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1397.3144.1prot_H-canaliculatus_F_contig1397.3144.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1397 13896..17127 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929142.20869-CDS-H-canaliculatus_F_contig1397:13895..139251622929142.20869-CDS-H-canaliculatus_F_contig1397:13895..13925Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 13896..13925 -
1696845693.4975562-CDS-H-canaliculatus_F_contig1397:13895..139251696845693.4975562-CDS-H-canaliculatus_F_contig1397:13895..13925Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 13896..13925 -
1622929142.222129-CDS-H-canaliculatus_F_contig1397:14142..142311622929142.222129-CDS-H-canaliculatus_F_contig1397:14142..14231Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 14143..14231 -
1696845693.5090945-CDS-H-canaliculatus_F_contig1397:14142..142311696845693.5090945-CDS-H-canaliculatus_F_contig1397:14142..14231Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 14143..14231 -
1622929142.2346325-CDS-H-canaliculatus_F_contig1397:14938..150291622929142.2346325-CDS-H-canaliculatus_F_contig1397:14938..15029Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 14939..15029 -
1696845693.5181785-CDS-H-canaliculatus_F_contig1397:14938..150291696845693.5181785-CDS-H-canaliculatus_F_contig1397:14938..15029Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 14939..15029 -
1622929142.2457094-CDS-H-canaliculatus_F_contig1397:15334..154361622929142.2457094-CDS-H-canaliculatus_F_contig1397:15334..15436Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 15335..15436 -
1696845693.528462-CDS-H-canaliculatus_F_contig1397:15334..154361696845693.528462-CDS-H-canaliculatus_F_contig1397:15334..15436Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 15335..15436 -
1622929142.259556-CDS-H-canaliculatus_F_contig1397:16140..162161622929142.259556-CDS-H-canaliculatus_F_contig1397:16140..16216Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 16141..16216 -
1696845693.5383754-CDS-H-canaliculatus_F_contig1397:16140..162161696845693.5383754-CDS-H-canaliculatus_F_contig1397:16140..16216Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 16141..16216 -
1622929142.273066-CDS-H-canaliculatus_F_contig1397:16756..169141622929142.273066-CDS-H-canaliculatus_F_contig1397:16756..16914Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 16757..16914 -
1696845693.5468843-CDS-H-canaliculatus_F_contig1397:16756..169141696845693.5468843-CDS-H-canaliculatus_F_contig1397:16756..16914Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 16757..16914 -
1622929142.2836618-CDS-H-canaliculatus_F_contig1397:17058..171271622929142.2836618-CDS-H-canaliculatus_F_contig1397:17058..17127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 17059..17127 -
1696845693.5590944-CDS-H-canaliculatus_F_contig1397:17058..171271696845693.5590944-CDS-H-canaliculatus_F_contig1397:17058..17127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 17059..17127 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929142.294539-UTR-H-canaliculatus_F_contig1397:17127..171331622929142.294539-UTR-H-canaliculatus_F_contig1397:17127..17133Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1397 17128..17133 -
1696845693.5701268-UTR-H-canaliculatus_F_contig1397:17127..171331696845693.5701268-UTR-H-canaliculatus_F_contig1397:17127..17133Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1397 17128..17133 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1397.3144.1

>prot_H-canaliculatus_F_contig1397.3144.1 ID=prot_H-canaliculatus_F_contig1397.3144.1|Name=mRNA_H-canaliculatus_F_contig1397.3144.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=205bp
MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIII
SATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQT
QAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAM
KFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGP
KTPLS
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mRNA from alignment at H-canaliculatus_F_contig1397:13896..17133-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1397.3144.1 ID=mRNA_H-canaliculatus_F_contig1397.3144.1|Name=mRNA_H-canaliculatus_F_contig1397.3144.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3238bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1397:13896..17133- (Hapterophycus canaliculatus Oshoro5f female)
ACAACCATGGCGACCAACATGTCGAAGAAGCGCAAGTTCGTGGCGGACGG
CGTCTTCTATGCCGAGCTCAACGAGGTGAGGCTGTAGTCACCAACTACAG
ACGAGCACTCCTTCCTCACTCCCTTGTTTTCAAAACGTGCCCATAGCTCC
ATGTGTCTCCCTTTGACCTTGGTCTGAAATTGCCAACTACAAAATCGCCG
GCTCGCCTACCCATCGCAGCTTCTTACCCAGGAGCTTGCGGAGGAGGGCT
ACGCGGGTGTGGAGGTGCGCGTGACCCCCCTTCGCACTGAGATCATCATC
AGTGCCACCCGCCCCCAGAATGTGCTTGGCGAGAAGGGCCAACGCATCAG
GGAGCTCACCTCCGTGGTACAGAAGCGGTGGGTGTGCATTTTGGGGTGGC
CTTCCGCATTCCTTTCCGATAGAGGGGGGTACTCCTGGCAGATGAAGGTT
TATCTCGGGAACAGGACCCGCACTACTTCACCGACTACACTAGTAACTGT
TTCCCGGAGCCAAAGACCTCGAGCCTCCAGCGCTGCCGTGGATGTCGCCT
TCTGTTTCTCGTTGTCCACATCGCTCATACGACTCGCGGCGCGGCAAGGA
GTTTGGATCGGACTTGATGGCGGCATTCTAGGGTTAGTATTACGTCCCCT
GCCCGTCTCAGACTGGGTTCTTCCTATATATATAGAGGAAGAGTCGAAAT
CGATGGGCGAATCCCCTGGATAGGGGCTTTGGAGGAATACTTCTGCAGCA
CAATATCTTGAATTCCTCATGGTGAAAATCGGGTTTCGAAGAGGATACCA
AAAAAAGGGGTGGACTCTACCTGGTCGCAATAAGATCCACAACCGCTTCC
TCAAAATACATCTGGAGTATTATTTAATCCTCCATCGCCGATGCTTTCCA
TACGCCGATTTTTCCAGGTTCAACTTCCCTGATGACGCCGTTGAGCTTTA
CGCGGAGCGAGTGGCAAAGCGCGGCCTGTGTGCGCAGACCCAGGTACAGC
AAGAGTTGTGGTGGGTCTTCTGATCCAAATTGTTCTGTAAATCGCTGATG
ACTACGAATAGGATGGTACAAGTAAAGCATATCGGTGCTCGCCCGTGCAC
CTGGCCCCGTGGTAAGTTCTCTTGTGGACTAGGTCACACGACTTAAATGG
TCAGCGGCAGCAGCATCGTCCGAATGTGCTTCGTGGACGCACTTGATTCT
CCTCCTCGTTAGGTTCCTCATATTCCGTCGTACGGTTGAATTTATTTGGC
TTTGATGACTCTCCTGACGTTAGCCCCGTGGAGCTTTTTTGTAGCGAATT
CGCTCCCGATCTATTCGCGTCCATGACCACTACAGCCATCGTCCAAGCAG
TTGCCGCCGGAAACTCAACGCGGACAATTTCTCGCTTATTGAGATACTAG
CTGTTGAGAGGTTCTGGAAGTTAAAACTTGCAGTGGCACCCAAAGTTGGT
CACGGTGTGCTGTCTCATACACATGGCCAGCGTACCACCAAAAGGCCAGT
CCTTGTCAGTGACTGCGGGCAGTGAACACGCCAATCCGGATAATACTGCC
GTACAACCGCGAACTTGTAGCATAGTCCTGTCCGGTTCAACAGGGTCAGC
GCAAAGTCTCTGCACAAAGAGGCAGGAGCATTGTTGCCAATACTTCTACG
GTCCTTCGTCTTACTCGGGATACTTCGCCATACCCCATACTCCGTAGGCC
GAGTCGCTCAAATACAAGCTTTTGGGTGGACTTGCTGTGCGCCGCGCATG
CTATGGCGTCCTCCGCTTCATCATGGAGTCCGGGGCCAAGGGTGCCGAGG
TGAGAGGTTTCCACGTGTGGCGTCAACTTTTCTTGTCTGGCGTCTGGTTT
TTCTGTCACGAAGGCAGGCATGGCAGTGTCACCTTCGAGAAATGTACGAA
ATGTATACGTGAAAATATTTCGGAGAACGACCGGTAAGGTTTACAGAGAT
GTTCGCCTTTCGCGGACGCATGAGCCGAATTCGAGGGAAGATGGATTGTC
CGCAAGGTGGGCATGTAGTCTCTCCCCTGGACATGTGACTCATGTCCTAG
AGATCTCAATCACAGCCAAAACTTGACGAGGAAGTATTCGGTTAAACGCT
TCAGGTGATCGTAGCCGGAAAGCTGAGAGCGCAACGTGCGAAGGCCATGA
AGTTCCGCGACGGCTACATGATCAAGAGTGGCCGCGTCAGGGAGGGTGAG
TACCGCGTATTTCTGCCGCTGTCCTGTCGGCTTTCTCCCGCGCCTCACTT
TGGCTGCAGGCATAAATGCCTTCATTCTGTTGGGCATTATATGTGTAACG
TCACGAGGATGGTCGACAGGTTTGTTGCCTCGCAAATTACGGCGAAATTA
CGGCACGTTGCGTCGTTCCCGCGTGAAAAGGTTTATGCGAAAGAGAAGAG
ACCACGTGTCGGGAAAATCAAATAATGGGATGCCCTCGGTATTGTGAGCA
CCTGAAACTTATACAGTTCGACATATTACGCGAGACCGACGCCTGATCCT
CTCTGAGTCAGGCCAGCGCTCTACGCCTTGCTCTTGGACGGGATCTAGCA
GCCTTTTCGTATCTCACTTCTCCAAATAAGGCAGCGATCACCGCACGCAC
ACACTGGGCATAGCGAAAACACCCACCTGGGACAATTGCATCGATACGTA
TACCACGTAGTCTAAGTGAGAGATCGGGAAGACTAGACGTACTCATCTTC
GTGCCAACAGGCTTTACGAGCAAAGGACACGTCATATTCGGACCCTGGTT
CGGCGCAGAGAGCCTAGCACATCGTTCTGCACTGCGTATCTGCCGGAGGA
ACGCCCACTCCCAACGGCATTTTTCCATTCGACGCGACCTTCGTGCCACT
CGATGACCAACTGTTTTCTCGTGCTTTTATCGGGCCCCTTCGTTTGTCGC
AGACTACGTGGACCACGCTGTGCGCCACGTCATGATGCGCCAGGGCGTTC
TTGGTGTCACCGTGTCCATCATGCTTCCCCACGACCCCACGGTAAGAGCG
CCGTCATCGTATTGCCCGTTGTTTAGATGGCACGTGGTGAAAGGACTGTG
AAATTTTTTTACCAAAAACGAAAGGCCTCGATTTGCCCTGTGATGTTCGT
TATATCTCCGAGCTCGAGCTGTGCGCGCGTCACCGTTCAATTTACTCGAA
CCGTCTGCCTCATTTTTTTCCATTCCCGACGTACGTCTTTCATGGTTATC
TGTTGCAGGGCAAGGAGGGCCCCAAGACTCCCCTGTCG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1397:13896..17133-

>mRNA_H-canaliculatus_F_contig1397.3144.1 ID=mRNA_H-canaliculatus_F_contig1397.3144.1|Name=mRNA_H-canaliculatus_F_contig1397.3144.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1230bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1397:13896..17133- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGACCAACATGTCGAAGAAGCGCAAGTTCGTGGCGGACGGCGTCTT
CTATGCCGAGCTCAACGAGATGGCGACCAACATGTCGAAGAAGCGCAAGT
TCGTGGCGGACGGCGTCTTCTATGCCGAGCTCAACGAGCTTCTTACCCAG
GAGCTTGCGGAGGAGGGCTACGCGGGTGTGGAGGTGCGCGTGACCCCCCT
TCGCACTGAGATCATCATCAGTGCCACCCGCCCCCAGAATGTGCTTGGCG
AGAAGGGCCAACGCATCAGGGAGCTCACCTCCGTGGTACAGAAGCGCTTC
TTACCCAGGAGCTTGCGGAGGAGGGCTACGCGGGTGTGGAGGTGCGCGTG
ACCCCCCTTCGCACTGAGATCATCATCAGTGCCACCCGCCCCCAGAATGT
GCTTGGCGAGAAGGGCCAACGCATCAGGGAGCTCACCTCCGTGGTACAGA
AGCGGTTCAACTTCCCTGATGACGCCGTTGAGCTTTACGCGGAGCGAGTG
GCAAAGCGCGGCCTGTGTGCGCAGACCCAGGTTCAACTTCCCTGATGACG
CCGTTGAGCTTTACGCGGAGCGAGTGGCAAAGCGCGGCCTGTGTGCGCAG
ACCCAGGCCGAGTCGCTCAAATACAAGCTTTTGGGTGGACTTGCTGTGCG
CCGCGCATGCTATGGCGTCCTCCGCTTCATCATGGAGTCCGGGGCCAAGG
GTGCCGAGGCCGAGTCGCTCAAATACAAGCTTTTGGGTGGACTTGCTGTG
CGCCGCGCATGCTATGGCGTCCTCCGCTTCATCATGGAGTCCGGGGCCAA
GGGTGCCGAGGTGATCGTAGCCGGAAAGCTGAGAGCGCAACGTGCGAAGG
CCATGAAGTTCCGCGACGGCTACATGATCAAGAGTGGCCGCGTCAGGGAG
GGTGATCGTAGCCGGAAAGCTGAGAGCGCAACGTGCGAAGGCCATGAAGT
TCCGCGACGGCTACATGATCAAGAGTGGCCGCGTCAGGGAGGACTACGTG
GACCACGCTGTGCGCCACGTCATGATGCGCCAGGGCGTTCTTGGTGTCAC
CGTGTCCATCATGCTTCCCCACGACCCCACGACTACGTGGACCACGCTGT
GCGCCACGTCATGATGCGCCAGGGCGTTCTTGGTGTCACCGTGTCCATCA
TGCTTCCCCACGACCCCACGGGCAAGGAGGGCCCCAAGACTCCCCTGTCG
GGCAAGGAGGGCCCCAAGACTCCCCTGTCG
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