mRNA_H-canaliculatus_F_contig13951.3136.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A6H5KFL7_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL7_9PHAE) HSP 1 Score: 466 bits (1200), Expect = 9.690e-158 Identity = 228/243 (93.83%), Postives = 236/243 (97.12%), Query Frame = 1
Query: 1 RMNARDASNLEGVGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHALAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHEKV 729
RMNARDASNLEGVGDLTAAGVRLGNRTFN+LKRDIRKKKEKGM++GGRVE ATRSTQEGVMDPRTRLL+FKM N GTLLEVHGMVKTGKEAHVYHALAPEDPE +TGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSR+KMFAIWAKKEHRNLLRL RAGIPCPEPIKQREHTLVLSFIG DHWPAPQLRE+DLSKANWRRCYA+VLELARLMF KCHLVHADLSEYNVLYHEKV
Sbjct: 370 RMNARDASNLEGVGDLTAAGVRLGNRTFNSLKRDIRKKKEKGMAAGGRVEQATRSTQEGVMDPRTRLLLFKMQNNGTLLEVHGMVKTGKEAHVYHALAPEDPEAMTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSREKMFAIWAKKEHRNLLRLHRAGIPCPEPIKQREHTLVLSFIGKDHWPAPQLREIDLSKANWRRCYAEVLELARLMFVKCHLVHADLSEYNVLYHEKV 612
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: D7FKT3_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT3_ECTSI) HSP 1 Score: 343 bits (880), Expect = 3.430e-115 Identity = 164/172 (95.35%), Postives = 166/172 (96.51%), Query Frame = 1
Query: 214 MVNAGTLLEVHGMVKTGKEAHVYHALAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHEKV 729
M N GTLLEVHGMVKTGKEAHVYHALAPEDPE +TGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRL RAGIPCPEPIKQREHTLVLSFIG DHWPAPQLRE+DLSKANWRRCYAQVLELARLMF KCHLVHADLSEYNVLYHEKV
Sbjct: 1 MQNTGTLLEVHGMVKTGKEAHVYHALAPEDPEAMTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLHRAGIPCPEPIKQREHTLVLSFIGKDHWPAPQLREIDLSKANWRRCYAQVLELARLMFLKCHLVHADLSEYNVLYHEKV 172
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: K8Z663_NANGC (Non-specific serine/threonine protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z663_NANGC) HSP 1 Score: 227 bits (578), Expect = 2.120e-66 Identity = 137/304 (45.07%), Postives = 181/304 (59.54%), Query Frame = 1
Query: 1 RMNARDA-SNLEGVGDLTA-AGVRLGNRTFNALKRDIRKKKEKGMSSG---GRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLL-EVHGMVKTGKEAHVYHA--LAP--------------------------EDPETLT----GSRG--------VALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKAN------------------WRRCYAQVLELARLMFQKCHLVHADLSEYNVLYH 720
R+NA + S GVGD+ A +G + NR N L++ K + SSG G +EG TR TQEGV+D RTRLL+ +++N G+L EV G+VKTGKE++VY+A + P E+ + L G RG A+KIFKTTL+EF NRAAY+DGDPR+G +RFNK+S + F +WA+KE RNLLR+ +AGIPCP P+ Q+EH LV+SF+G D WP+PQLREV LS + W +CY VL L R ++QK LVH DLSEYN+L+H
Sbjct: 229 RLNALELMSRYSGVGDVEAESGFSIPNRASNQLRQRFNKDEVAKNSSGAAAGAMEGRTRQTQEGVLDARTRLLLLRILNKGSLFREVGGVVKTGKESNVYYAPGVGPRGREEDGEGWREDGSGERERKVEGRVEEDKVLVEREGGGRGGRKAKGCDCAIKIFKTTLNEFSNRAAYIDGDPRFGKLRFNKKSTRAKFQLWAEKEARNLLRMRKAGIPCPVPLLQKEHVLVMSFLGEDGWPSPQLREVRLSPSAASKGRGREGGEGGGARQWWEKCYRSVLMLVRDLYQKAGLVHGDLSEYNILWH 532
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: W7TIV6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIV6_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.150e-61 Identity = 126/304 (41.45%), Postives = 167/304 (54.93%), Query Frame = 1
Query: 55 AGVRLGNRTFNALKRDIRKKKEKGMSSG---GRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLL-EVHGMVKTGKEAHVYHA----------------------------------------------------------LAPEDPETLTGSRGV--ALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKAN------------------WRRCYAQVLELARLMFQKCHLVHADLSEYNVLYH 720
+G + NR N L++ K + SSG G +EG TR TQEGV+D RTRLL+ +++N G+L EV G+VKTGKE++VY+A L+ E++ G G A+KIFKTTL+EF NRAAY+DGDPR+G +RFNK+S + F +WA+KE RNLLR+ +AGIPCP P+ Q+EH LV+SF+G D WP+PQLREV LS + W +CY VL L R ++QK LVH DLSEYN+L+H
Sbjct: 105 SGFSIPNRASNQLRQRFNKDEVAKNSSGAAAGAMEGRTRQTQEGVLDARTRLLLLRILNKGSLFREVGGVVKTGKESNVYYAPGVGPRGREEDGEGWREDGSGERERKVEGRVEEDKVLVEREGGRKGGEEGQRSVAGSALSGRKMESMEGIAGCDCAIKIFKTTLNEFSNRAAYIDGDPRFGKLRFNKKSTRAKFQLWAEKEARNLLRMRKAGIPCPVPLLQKEHVLVMSFLGEDGWPSPQLREVRLSPSAASKGRGREGGEGGGARQWWEKCYRSVLMLVRDLYQKAGLVHGDLSEYNILWH 408
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A2P6N6M4_9EUKA (Non-specific serine/threonine protein kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N6M4_9EUKA) HSP 1 Score: 204 bits (519), Expect = 5.880e-58 Identity = 104/225 (46.22%), Postives = 156/225 (69.33%), Query Frame = 1
Query: 61 VRLGNRTFNALKRDIRKKKEKGMSSGGRVEGATR--STQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHALAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHEKV 729
+R+ N FN L++++R+++ + RV G +T+E VMDPRT+ +VFKM+N+G L E+HG+V GKEA+VYHA+ D E + + A+KIFKT+++EF NRA Y++GD R+ N + +R K+ +WA+KE RNL R+ AGI CPEPI RE+ L++SFIG D +PAP+LR+V++ W+ Y V++ R M+ +C LVHADLSEYN++Y ++V
Sbjct: 317 IRVSNPVFNNLRQNVRRQRTR----ANRVRGNKMDVATEEKVMDPRTKTIVFKMLNSGVLREIHGVVSAGKEANVYHAVTG-DYEGIESNVECAIKIFKTSMNEFKNRAEYLEGDYRFKNKKSQHNTR-KLIKLWAEKETRNLKRMRSAGIQCPEPILLRENILIMSFIGRDGFPAPRLRDVEVDTQVWKGIYHSVIKTMRKMYHQCKLVHADLSEYNLMYRKRV 535
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A673FF05_9TELE (Non-specific serine/threonine protein kinase n=3 Tax=Cyprininae TaxID=2743694 RepID=A0A673FF05_9TELE) HSP 1 Score: 193 bits (491), Expect = 2.430e-56 Identity = 103/229 (44.98%), Postives = 150/229 (65.50%), Query Frame = 1
Query: 37 VGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHALAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHE 723
VGD ++L N +NALKR ++ + S E ST E +DP+TRLL++KMVNAG L ++G + TGKE+ V+HA E + V LK+FKTTL+EF NR Y+ D R+ + RF+K + +K+ +WA+KE NL R+ +AGIPCPE + ++H LV+SFIG DH PAP+L++ LS + ++ Y QVL + + ++Q C+LVHADLSEYN+L+H+
Sbjct: 159 VGDGIGMDLKLSNHVYNALKRHCYTEQRR---SARLHEKKEYSTAEHAVDPKTRLLMYKMVNAGILENINGCISTGKESVVFHANGGSFEEKIVPEECV-LKVFKTTLNEFKNRDKYIKDDYRFKD-RFSKLNPRKIIRLWAEKEMHNLTRMKKAGIPCPEVVILKKHILVMSFIGKDHVPAPKLKDATLSSEDMKKAYYQVLNMMQQLYQDCNLVHADLSEYNMLWHD 382
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A673AYU0_9TELE (Non-specific serine/threonine protein kinase n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AYU0_9TELE) HSP 1 Score: 192 bits (489), Expect = 3.480e-56 Identity = 104/229 (45.41%), Postives = 149/229 (65.07%), Query Frame = 1
Query: 37 VGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHALAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHE 723
VGD ++L N+ FN+LK+ ++ + S E ST E +DPRTRLL++KMVNAG L ++G + TGKE+ V+HA E V LK+FKTTL+EF NR Y+ D R+ + RF+K + +K+ +WA+KE NL R+ +A IPCPE + ++H LV+SFIG DH PAP+L++ LS + + Y QVL L + ++Q+CHLVHADLSEYN+L+H+
Sbjct: 116 VGDGLGMDLKLSNQVFNSLKQHCYSEQRR---SARLHEKKEHSTAEQAVDPRTRLLMYKMVNAGVLENINGCISTGKESVVFHADGGSLDEQPVPEE-VVLKVFKTTLNEFKNRDRYIKDDYRFID-RFSKLNPRKVIRLWAEKEMHNLSRMKKAEIPCPEVVLLKKHILVMSFIGKDHVPAPKLKDAMLSSEDMKTAYHQVLHLMQQLYQECHLVHADLSEYNILWHQ 339
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A8C4Z5Q2_GADMO (Serine/threonine-protein kinase RIO3 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4Z5Q2_GADMO) HSP 1 Score: 195 bits (495), Expect = 4.320e-56 Identity = 105/232 (45.26%), Postives = 153/232 (65.95%), Query Frame = 1
Query: 37 VGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHA---LAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHE 723
VGD ++L N+ FN+LK+ ++ + + E ST E +DPRTRLL++KMV+AGTL ++G + TGKE+ V+HA + E P V LK+FKTTL+EF NR Y+ D R+ + RF+K + +K+ +WA+KE NL R+ +AGIPCPE R+H LVLSFIG DH PAP+L++ L A+ + Y QVL++ + ++Q+C+LVHADLSEYN+L+H+
Sbjct: 143 VGDGLGMDLKLSNQVFNSLKQHCHSEQRRSARLHDKKE---HSTAEQAVDPRTRLLMYKMVSAGTLERINGCISTGKESVVFHANGGMLEEQPVP----EEVVLKVFKTTLNEFKNRDRYIKDDYRFKD-RFSKLNPRKIIRLWAEKEMHNLARMKKAGIPCPEVALLRKHILVLSFIGKDHVPAPKLKDTMLGAADMKTAYYQVLQMMQQLYQECNLVHADLSEYNMLWHQ 366
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A3B4A413_9GOBI (Serine/threonine-protein kinase RIO3 n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B4A413_9GOBI) HSP 1 Score: 194 bits (494), Expect = 6.760e-56 Identity = 103/230 (44.78%), Postives = 154/230 (66.96%), Query Frame = 1
Query: 37 VGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRV-EGATRSTQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHALAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHE 723
VGD ++L N+ FN+LK+ + ++ + RV E ST E +DPRTRLL++KMVNAG L ++G + TGKE+ V+HA E + V LK+FKTTL+EF NR Y+ D R+ RF+K + +K+ +WA+KE NL RL RA +PCPE + ++H LV+SFIGA+H PAP+L++ L++ + ++ Y QVL + + M+++C+LVHADLSEYN+L+H+
Sbjct: 149 VGDGLGMDLKLSNQVFNSLKQHVHSEQRR----SARVHEKKEHSTAEQAVDPRTRLLMYKMVNAGVLENINGCISTGKESVVFHANGGSLEEEPVPAE-VVLKVFKTTLNEFKNRDRYIKDDYRFKE-RFSKLNPRKVIRLWAEKEMHNLTRLRRAEVPCPEVVLLKKHILVMSFIGAEHIPAPKLKDAILNEDDMKKAYHQVLHMMKTMYEECNLVHADLSEYNLLWHQ 372
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Match: A0A8C4ZZG3_GADMO (Serine/threonine-protein kinase RIO3 n=7 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZZG3_GADMO) HSP 1 Score: 195 bits (495), Expect = 7.190e-56 Identity = 105/232 (45.26%), Postives = 153/232 (65.95%), Query Frame = 1
Query: 37 VGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRVEGATRSTQEGVMDPRTRLLVFKMVNAGTLLEVHGMVKTGKEAHVYHA---LAPEDPETLTGSRGVALKIFKTTLSEFGNRAAYVDGDPRYGNMRFNKQSRQKMFAIWAKKEHRNLLRLFRAGIPCPEPIKQREHTLVLSFIGADHWPAPQLREVDLSKANWRRCYAQVLELARLMFQKCHLVHADLSEYNVLYHE 723
VGD ++L N+ FN+LK+ ++ + + E ST E +DPRTRLL++KMV+AGTL ++G + TGKE+ V+HA + E P V LK+FKTTL+EF NR Y+ D R+ + RF+K + +K+ +WA+KE NL R+ +AGIPCPE R+H LVLSFIG DH PAP+L++ L A+ + Y QVL++ + ++Q+C+LVHADLSEYN+L+H+
Sbjct: 167 VGDGLGMDLKLSNQVFNSLKQHCHSEQRRSARLHDKKE---HSTAEQAVDPRTRLLMYKMVSAGTLERINGCISTGKESVVFHANGGMLEEQPVP----EEVVLKVFKTTLNEFKNRDRYIKDDYRFKD-RFSKLNPRKIIRLWAEKEMHNLARMKKAGIPCPEVALLRKHILVLSFIGKDHVPAPKLKDTMLGAADMKTAYYQVLQMMQQLYQECNLVHADLSEYNMLWHQ 390 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13951.3136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13951.3136.1 >prot_H-canaliculatus_F_contig13951.3136.1 ID=prot_H-canaliculatus_F_contig13951.3136.1|Name=mRNA_H-canaliculatus_F_contig13951.3136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=242bp MNARDASNLEGVGDLTAAGVRLGNRTFNALKRDIRKKKEKGMSSGGRVEGback to top mRNA from alignment at H-canaliculatus_F_contig13951:150..2697+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13951.3136.1 ID=mRNA_H-canaliculatus_F_contig13951.3136.1|Name=mRNA_H-canaliculatus_F_contig13951.3136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2548bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13951:150..2697+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13951:150..2697+ >mRNA_H-canaliculatus_F_contig13951.3136.1 ID=mRNA_H-canaliculatus_F_contig13951.3136.1|Name=mRNA_H-canaliculatus_F_contig13951.3136.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1452bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13951:150..2697+ (Hapterophycus canaliculatus Oshoro5f female)back to top |