mRNA_H-canaliculatus_F_contig13913.3112.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13913.3112.1
Unique NamemRNA_H-canaliculatus_F_contig13913.3112.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: D7FPD4_ECTSI (Protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD4_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 3.900e-87
Identity = 165/270 (61.11%), Postives = 180/270 (66.67%), Query Frame = 1 
Query:   19 NPYVATEAQGGSADYMDFVRVRGLVSRKAAA--CFKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVRMAAGSA--PGTDSSSRNLAA-----------------------------NGAGSGGKGDGEGRVDSPTSGGALEEGXXXXXXXXXXXXXXXXXAGETALQDLSKNWFSAENTLRVYGE 729
            +P+ A +AQGGSADYMDFVR+RGLVS+KAAA  CF+ RTFLRFPRDIR RIPSR FFKHVYESVTLQKTRLTLHFYDSE LGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKI ID LVRS +MEEFLQVR+A G    PG  +                                    + A  GG G    R  +P   G  ++G                    + LQDLSKNWFSAE+TLRVYGE
Sbjct:  244 DPHAAVDAQGGSADYMDFVRLRGLVSKKAAAAACFRSRTFLRFPRDIRARIPSRVFFKHVYESVTLQKTRLTLHFYDSEGLGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKISIDTLVRSRVMEEFLQVRIAPGEQEEPGYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAATVGGVGTTPSREGAPQGEGGRDDGN-----------------NHSPLQDLSKNWFSAESTLRVYGE 496
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A6H5KJ60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ60_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 5.800e-77
Identity = 164/321 (51.09%), Postives = 177/321 (55.14%), Query Frame = 1 
Query:   19 NPYVATEAQGGSADYMDFVRVRGLVSRKAAA-CFKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTG----------------------------------------------KIPIDALVRSSIMEEFLQVRMAAGSA--PGT-----------------------------------DSSSRNLAANGAGSGGKGDGEGRVDSPTSGGALEEGXXXXXXXXXXXXXXXXXAGETALQDLSKNWFSAENTLRVYGE 729
            +P+ A +AQGGSADYMDFVR+RGLVS+KAAA CF+ RTFLRFPRDIR RI SR FFKHVYESVTLQKTRLTLHFYDSE LGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTG                                              KI ID LVRS +MEEFLQVRMA G    PG+                                              A  GG G    R  +P   G  ++                     + LQDLSKNWFSAE+TLRVYGE
Sbjct:  120 DPHAAVDAQGGSADYMDFVRLRGLVSKKAAAACFRSRTFLRFPRDIRARISSRVFFKHVYESVTLQKTRLTLHFYDSEGLGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGVSRAWACSPIDSDLADFADMDMLERRACVPVFVSKERRISRKERAGKISIDTLVRSRVMEEFLQVRMAPGEQGEPGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGVGSTLSREGAPQGEGGRDD-----------------TGNHSPLQDLSKNWFSAESTLRVYGE 423
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A835YRV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.200e-42
Identity = 97/232 (41.81%), Postives = 125/232 (53.88%), Query Frame = 1 
Query:   40 AQGGSADYMDFVRVRGLVSRKAAACFKPRTFLRFPRD--IRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVRMAAGSAPGTDSSSRNLAANGAGSGGKGDGEGRVDSPTSGGALEEGXXXXXXXXXXXXXXXXXAGETALQDLSKNWFSAENTLRVYGE 729
            + GG  DY  F+ V+     +A   F+ RTFL+         R+     FKHVY ++ LQKTR+TLH+YD+E  G LRE D+ENYVYD IPT+PALRA+ ++F+PFYVFTAVRRFMFFLDP+R G+IP+  L+RS +M++ L++ MA G                                  GG  E                    GE    D+S NWFSAEN LRVY E
Sbjct:  292 SSGGGLDYDAFLAVKARAPARARKYFEARTFLKLQAGGAAAWRVSGPLLFKHVYGALCLQKTRVTLHYYDAEGRGALRETDVENYVYDLIPTVPALRAVPESFHPFYVFTAVRRFMFFLDPRRMGRIPVARLIRSRVMDDLLELGMAVG----------------------------------GGGSE--------------------GEEPAGDMSGNWFSAENALRVYTE 469
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A7R9UCK0_9STRA (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCK0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.320e-33
Identity = 76/221 (34.39%), Postives = 109/221 (49.32%), Query Frame = 1 
Query:   61 YMDFVRVRGLVSRKAAACFKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVRMAAGSAPGTDSSSRNLAANGAGSGGKGDGEGRVDSPTSGGALEEGXXXXXXXXXXXXXXXXXAGETALQDLSKNWFSAENTLRVY 723
            Y DF  +R  +        + R FLR PRD +GR+ S+  F+ ++ +    +TR  L +YD+E  G+LREQDLENY+YD I  +P+L ++ D+F PFYV+TAVRRF+FFLDP+RTG+I +  L  S++MEEF ++                                                                GE  ++  ++NWFS ENTLRVY
Sbjct:   79 YEDFRALRDELPGPMKVLLRAREFLRLPRDSKGRVSSQEVFRRIHNTTCSMRTRTQLKYYDAEGKGYLREQDLENYLYDFIDNIPSLASMIDSFLPFYVYTAVRRFVFFLDPRRTGRISVAKLANSAVMEEFYEI------------------------------------------------------------VSLDGEDEVEGAARNWFSLENTLRVY 239
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A7S2R8D6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R8D6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.660e-33
Identity = 72/140 (51.43%), Postives = 93/140 (66.43%), Query Frame = 1 
Query:   49 GSADYMDFVRVRGLVSRKAAACFKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVR 468
            G  +Y DF  VR  ++      F PR F +F RD  GRI  + FF++V   V LQ+ R+ L+ YD+   G LREQDLENY+Y+ IP++ AL  + +NFYPFYVFTAVR+F FFLDPK T KIPI  LV SSI+ E L ++
Sbjct:  154 GRINYDDFCTVREELASHLGHVFTPRVFSKFRRDEWGRISVQFFFQYVCRIVNLQRNRIQLYVYDTHGDGCLREQDLENYIYELIPSLHALVDLQENFYPFYVFTAVRKFFFFLDPKHTCKIPIRDLVTSSILHELLHLQ 293
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A7S1UEY0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEY0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.970e-32
Identity = 71/149 (47.65%), Postives = 96/149 (64.43%), Query Frame = 1 
Query:   61 YMDFVRVRGLVSRKAAACFKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQ---VRMAAGS-APGT 495
            Y +F  +R  +   +      R FLR PRD +GR+ S   F+ ++ +    +TR  L +YDSE   FLREQDLENY+YD I  +P+L  + ++F PFYV+TAVRRFMFFLDP+RTG+I +  L  S++MEEF +   V  A GS APGT
Sbjct:  290 YEEFGSLRAALPPSSRMILGAREFLRLPRDAKGRVSSAEVFRRIHNTTCSMRTRTQLRYYDSEGRDFLREQDLENYLYDFIDNIPSLSTMIESFLPFYVYTAVRRFMFFLDPRRTGQISVKRLASSAVMEEFYEIVAVNGAGGSQAPGT 438
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A813A215_SYMMI (Calmodulin (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813A215_SYMMI)

HSP 1 Score: 127 bits (319), Expect = 3.270e-31
Identity = 64/140 (45.71%), Postives = 93/140 (66.43%), Query Frame = 1 
Query:   58 DYMDFVRVRGLVSRKAAAC---FKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVR 468
            DY+ F + R  + ++       F P T+L+FPRD  G I    FF  V   V L++TR+ L +YD+   GFLRE+D+EN++++ IPT+P L ++ + FYPFYVFTAVR+F FFLDPKRTG++ I  L+ S I+ E  ++R
Sbjct:   21 DYVAFCKTREELLQRGERFRQYFLPSTYLKFPRDQSGCIAIVPFFTFVVRKVNLRQTRVQLSYYDALGCGFLREKDMENFIFEMIPTLPQLNSLTEEFYPFYVFTAVRKFFFFLDPKRTGRVRIRDLLSSQILPELYELR 160
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A813INV7_POLGL (Calmodulin (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813INV7_POLGL)

HSP 1 Score: 125 bits (315), Expect = 5.390e-31
Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 1 
Query:  115 FKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVR 468
            F P TFL+FPRD  G I    FF  V   V L++TR+ L +YD+   G+LRE+D+EN++++ IPT+P L  + + FYPFYVFTAVR+F FFLDPKRTG++ I  L+ S I+ E  ++R
Sbjct:    3 FLPSTFLKFPRDHSGCIAIVPFFTFVVRKVNLKQTRVQLSYYDALGCGYLREKDMENFIFEMIPTLPQLSTLQEEFYPFYVFTAVRKFFFFLDPKRTGRVHIRDLLSSPILPELYELR 120
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: J9II11_9SPIT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma n=3 Tax=Sporadotrichida TaxID=693921 RepID=J9II11_9SPIT)

HSP 1 Score: 127 bits (319), Expect = 1.080e-30
Identity = 65/137 (47.45%), Postives = 88/137 (64.23%), Query Frame = 1 
Query:   58 DYMDFVRVRGLVSRKAAACFKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVR 468
            +Y  FV V  L+  K    F   TFL+F RD  GRI    FF +V   V L +TR+ +  YDS   G+L+E+DLENY+++ +PT P L+ + + FYPFYV TAVR+F FFLDPKRTGKI I  ++ S I+ E  ++R
Sbjct:  114 NYDQFVYVSTLLQPKCRQFFTSSTFLKFERDEYGRIEIVPFFHYVVRKVNLFQTRIQISLYDSSGYGYLKEKDLENYIFELMPTFPQLQNLQETFYPFYVITAVRKFFFFLDPKRTGKILIKDMLTSPILAELYELR 250
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BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Match: A0A7S3W6R9_9SPIT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W6R9_9SPIT)

HSP 1 Score: 122 bits (305), Expect = 1.230e-30
Identity = 60/118 (50.85%), Postives = 81/118 (68.64%), Query Frame = 1 
Query:  115 FKPRTFLRFPRDIRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIMEEFLQVR 468
            F P TFL+FPRD  G I    FF  V   V +++TR+ L  YD    G+LRE+D+EN++Y+ IPT+P L  + + FYPFYVFTAVR+F FFLDPKRTG++ I  L+ S I+ E  ++R
Sbjct:   36 FIPSTFLKFPRDQNGCIAIDPFFTFVVRKVNIKQTRVYLSHYDVLGCGYLREKDMENFIYELIPTLPQLNLLQEAFYPFYVFTAVRKFFFFLDPKRTGRVSIRDLLSSPIIIELYELR 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13913.3112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPD4_ECTSI3.900e-8761.11Protein phosphatase 2A regulatory subunit n=1 Tax=... [more]
A0A6H5KJ60_9PHAE5.800e-7751.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRV6_9STRA1.200e-4241.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UCK0_9STRA1.320e-3334.39Serine/threonine-protein phosphatase 2A regulatory... [more]
A0A7S2R8D6_9STRA1.660e-3351.43Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1UEY0_9STRA5.970e-3247.65Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A813A215_SYMMI3.270e-3145.71Calmodulin (Fragment) n=2 Tax=Symbiodinium TaxID=2... [more]
A0A813INV7_POLGL5.390e-3150.85Calmodulin (Fragment) n=1 Tax=Polarella glacialis ... [more]
J9II11_9SPIT1.080e-3047.45Serine/threonine-protein phosphatase 2A regulatory... [more]
A0A7S3W6R9_9SPIT1.230e-3050.85Serine/threonine-protein phosphatase 2A regulatory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13913contigH-canaliculatus_F_contig13913:170..2793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.4
Seed ortholog evalue2.5e-74
Seed eggNOG ortholog2880.D7FPD4
Preferred namePPP2R3C
KEGG koko:K11583
KEGG Pathwayko03015,ko04071,ko04151,ko04152,ko04261,ko04728,ko05165,map03015,map04071,map04151,map04152,map04261,map04728,map05165
GOsGO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0000911,GO:0000913,GO:0001776,GO:0001782,GO:0001932,GO:0001934,GO:0002260,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002759,GO:0002831,GO:0002920,GO:0003254,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007275,GO:0008104,GO:0008150,GO:0009524,GO:0009653,GO:0009790,GO:0009792,GO:0009826,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0015630,GO:0016043,GO:0016049,GO:0019220,GO:0019222,GO:0019899,GO:0019902,GO:0019903,GO:0022402,GO:0022607,GO:0030865,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032101,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032506,GO:0032989,GO:0033036,GO:0033365,GO:0033674,GO:0034613,GO:0040007,GO:0042325,GO:0042327,GO:0042391,GO:0042592,GO:0043029,GO:0043085,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043549,GO:0043900,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045577,GO:0045579,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045859,GO:0045860,GO:0045937,GO:0048285,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048536,GO:0048583,GO:0048589,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050776,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0051094,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051301,GO:0051338,GO:0051347,GO:0051641,GO:0051721,GO:0051881,GO:0051900,GO:0060255,GO:0060560,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070925,GO:0071840,GO:0080090,GO:0090307,GO:0140014,GO:1902105,GO:1902107,GO:1902410,GO:1902850,GO:1903047,GO:1903706,GO:1903708,GO:2000026
EggNOG free text desc.positive regulation of B cell differentiation
EggNOG OGsKOG2562@1,KOG2562@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036
Hectar predicted targeting categoryother localisation
Exons3
Model size729
Cds size729
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13913.3112.1prot_H-canaliculatus_F_contig13913.3112.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13913 170..2793 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929136.9318626-CDS-H-canaliculatus_F_contig13913:169..4921622929136.9318626-CDS-H-canaliculatus_F_contig13913:169..492Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13913 170..492 -
1696845691.3384826-CDS-H-canaliculatus_F_contig13913:169..4921696845691.3384826-CDS-H-canaliculatus_F_contig13913:169..492Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13913 170..492 -
1622929136.9585404-CDS-H-canaliculatus_F_contig13913:1363..15361622929136.9585404-CDS-H-canaliculatus_F_contig13913:1363..1536Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13913 1364..1536 -
1696845691.352467-CDS-H-canaliculatus_F_contig13913:1363..15361696845691.352467-CDS-H-canaliculatus_F_contig13913:1363..1536Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13913 1364..1536 -
1622929136.9780529-CDS-H-canaliculatus_F_contig13913:2560..27931622929136.9780529-CDS-H-canaliculatus_F_contig13913:2560..2793Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13913 2561..2793 -
1696845691.3612227-CDS-H-canaliculatus_F_contig13913:2560..27931696845691.3612227-CDS-H-canaliculatus_F_contig13913:2560..2793Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13913 2561..2793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13913.3112.1

>prot_H-canaliculatus_F_contig13913.3112.1 ID=prot_H-canaliculatus_F_contig13913.3112.1|Name=mRNA_H-canaliculatus_F_contig13913.3112.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=243bp
PPPPPANPYVATEAQGGSADYMDFVRVRGLVSRKAAACFKPRTFLRFPRD
IRGRIPSRTFFKHVYESVTLQKTRLTLHFYDSEALGFLREQDLENYVYDH
IPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKIPIDALVRSSIME
EFLQVRMAAGSAPGTDSSSRNLAANGAGSGGKGDGEGRVDSPTSGGALEE
GGQRGSSSEGGGGGGGAAAGETALQDLSKNWFSAENTLRVYGE
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mRNA from alignment at H-canaliculatus_F_contig13913:170..2793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13913.3112.1 ID=mRNA_H-canaliculatus_F_contig13913.3112.1|Name=mRNA_H-canaliculatus_F_contig13913.3112.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2624bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13913:170..2793- (Hapterophycus canaliculatus Oshoro5f female)
CCTCCTCCTCCTCCGGCTAATCCGTACGTGGCTACCGAGGCCCAGGGCGG
GAGCGCAGACTACATGGACTTCGTGAGGGTGCGGGGCCTGGTTTCCAGGA
AGGCGGCGGCGTGCTTCAAGCCCAGGACGTTCTTGAGGTTTCCCAGGGAC
ATTCGGGGGCGCATCCCGTCGCGCACCTTCTTCAAGCACGTGTACGAGTC
CGTGACCCTGCAGAAGACTAGGTTGACGCTGCAGTGAGTTGTTGCTCTCG
TTGCTGTCGTTGCTGTCGTTGTCGTCGTTGTTGTTGTTGTTGTTACTGCT
ACTGCTTCTTCTGCTGCTACTGCAATCGTTGCTGGTATTGCCATCGGTAG
CAGTCCTTTTCCTCTCTCGATCTTTGTACAACAATCGTTGACTTTGGTGC
AGTATTGTTTGTCGCTCTCTCTGGACCCCCCCCTCATACGAAGGCCGAGT
TTAACGAAAAGTGTGCAAATGTTGCGCCCTCTTCTTCGAAATTGTGTGCA
TAAGTTTAATCATGTACGCAAATGTCAATGCTGACATGTGTGATATAAAA
CCTCTCGATAGGGGGATCACCTGCCATGCAAGAGGGTGAAGGTGGTGATC
GTGCATTTCCCCCGTTTTTTTTGTCGTACGATCCCACCCCGCCTACAGTG
TATACGCCATCGAAGCTGCTCCGAACTCGTCTCTGCTTGCCTCCTTCTCC
GCCTCGTACAATTTCTCAGAACTTTCTGACAGCAATAATCTTGTTTGTAG
ATGACCCCACGCGCGTTCTATACCCGCCGCTCGAAACGTCCACTTGCATT
CTACCTTTCTCGACAACCTAGAAGGGGGTGATCGCGTATACGGGAAAAAG
GTAACGAAACACGTACAAGTCTGCGAAAAGATACCGTCGCGAGCATTCGA
GCGAAGGCTGGAAGTATATGAAACGTACGCGCATCCCCAGTGCCGTCACT
ACGTCCATTCATGACCTTTGCGTCCCATCCTCGGATCGCTCGGCAATTCG
GGAACCGCCGAGATGTGTTCCGGTTCGTGTGAATCTGCGGAGGACCGTCG
ATCCGTCGACGGCGTACGTGTGTAGTGTGACCGCTCAATCCGCAGGACTC
AGGACTCGTTTCGCCGTCTCTCTTCCTCTCGTGCCACTTTGGATGTCCCA
CGGAGGCTGCAGTTTTTGTTCCGTCGCCGATGGGTGACTCTCCCCGCCTC
CCACGCTTCGGGACTGCTGCCGCCGCCGCTGCCCCCTTCCCCCATTTCAC
CTCCCAGCTTTTACGACTCCGAGGCGCTGGGCTTCCTGCGGGAGCAAGAC
CTGGAGAACTACGTGTACGACCACATCCCCACCATGCCCGCCCTGCGCGC
GATCCACGACAACTTCTACCCCTTTTACGTCTTCACGGCGGTCAGGCGTT
TCATGTTCTTCCTCGACCCGAAGCGCACAGGTTCGTCACGAGCAAGAGGG
CCTTGACGCCGCGCGTGGAAGGGTCGGTGTGGCCGCCCGAGGCCGACAGG
CGGTGTGCACGCCATCACGCCTTTCTTCGTCGTCGGCGGAAGGGCGCGGG
GAAGGCTGTGTGCACCGCCTCGCAGAGACGGCGGCTCACGGCGAGAGGCC
CTCGGCTGCTGCGGACGTCGTGCGGGCCTTTTTGTTTCCTCGCGTTGCCC
ACGACTCTGCCGTGTGTGGTTCGTGTCAAAGCAACACGGCCCAAGGTACT
TAGGCGTACGACCAACGGCGATGACGGTGAAAGCGGTGACGGCGGTTTGT
CCTCCCCTAACGCGCAGCACCAGAGCCGGTTTCAACAACGAGACCCTTGG
TCTTCTGCACCCCGTACTATACTGTGACGATCTCGACCGTTGTGGCGACT
CTTGTCGCACTTCTGAAGGATCGGTTCAAGCTCGCATAGCAGCGAAAAGG
CTAGCACCCAGGAGGAGCCCACATCCGCGCTCACCCGATGCACCCTGTAT
GTGACAGCTATGCTGAGCGACTGAGTCGAATGAGGCCTCCCTGTTCCTCA
AGGGTGTCTAACAGGCGCAAACATGGAGAGACTAGACGAGTGGTTCTCGG
GAAAGCGTCCAACGATTAGTTCCTCGTATTGCCGCAGCGGTGGCTGATCC
CTTCGGAGGTATGCTAACGTCCGCAACCCCCGTTGGGACCATGGGCCCCG
TTGGGACCACGTGTGGATGTTCCCTGCGTGCATGCATTTGTGTGCGCGTG
TTCTTTTCCCACCCTTCCCCCTCGTCTCTCCGTCTGCCTTTCCCTCTCTC
CGCTCTCGACCGGTCTTCCTCGCACCGATCGTCCGCGTCTACCTACCCCA
GGAAAAATCCCCATCGACGCCCTCGTGCGCAGCAGCATCATGGAGGAGTT
CCTGCAGGTCAGGATGGCGGCGGGATCAGCGCCGGGAACCGATTCCAGCA
GCCGCAATCTCGCAGCGAACGGCGCAGGAAGTGGAGGAAAAGGAGACGGA
GAAGGAAGGGTGGATAGCCCTACGAGCGGCGGTGCCCTGGAGGAAGGTGG
TCAGCGGGGTAGTTCATCGGAGGGGGGGGGTGGCGGCGGCGGGGCCGCCG
CTGGGGAAACAGCGCTGCAGGATTTGAGCAAGAATTGGTTTTCAGCGGAG
AATACGCTACGGGTCTACGGCGAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13913:170..2793-

>mRNA_H-canaliculatus_F_contig13913.3112.1 ID=mRNA_H-canaliculatus_F_contig13913.3112.1|Name=mRNA_H-canaliculatus_F_contig13913.3112.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1458bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13913:170..2793- (Hapterophycus canaliculatus Oshoro5f female)
CCTCCTCCTCCTCCGGCTAATCCGTACGTGGCTACCGAGGCCCAGGGCGG
GAGCGCAGACTACATGGACTTCGTGAGGGTGCGGGGCCTGGTTTCCAGGA
AGGCGGCGGCGTGCTTCAAGCCCAGGACGTTCTTGAGGTTTCCCAGGGAC
ATTCGGGGGCGCATCCCGTCGCGCACCTTCTTCAAGCACGTGTACGAGTC
CGTGACCCTGCAGAAGACTAGGTTGACGCTGCACCTCCTCCTCCTCCGGC
TAATCCGTACGTGGCTACCGAGGCCCAGGGCGGGAGCGCAGACTACATGG
ACTTCGTGAGGGTGCGGGGCCTGGTTTCCAGGAAGGCGGCGGCGTGCTTC
AAGCCCAGGACGTTCTTGAGGTTTCCCAGGGACATTCGGGGGCGCATCCC
GTCGCGCACCTTCTTCAAGCACGTGTACGAGTCCGTGACCCTGCAGAAGA
CTAGGTTGACGCTGCACTTTTACGACTCCGAGGCGCTGGGCTTCCTGCGG
GAGCAAGACCTGGAGAACTACGTGTACGACCACATCCCCACCATGCCCGC
CCTGCGCGCGATCCACGACAACTTCTACCCCTTTTACGTCTTCACGGCGG
TCAGGCGTTTCATGTTCTTCCTCGACCCGAAGCGCACAGCTTTTACGACT
CCGAGGCGCTGGGCTTCCTGCGGGAGCAAGACCTGGAGAACTACGTGTAC
GACCACATCCCCACCATGCCCGCCCTGCGCGCGATCCACGACAACTTCTA
CCCCTTTTACGTCTTCACGGCGGTCAGGCGTTTCATGTTCTTCCTCGACC
CGAAGCGCACAGGAAAAATCCCCATCGACGCCCTCGTGCGCAGCAGCATC
ATGGAGGAGTTCCTGCAGGTCAGGATGGCGGCGGGATCAGCGCCGGGAAC
CGATTCCAGCAGCCGCAATCTCGCAGCGAACGGCGCAGGAAGTGGAGGAA
AAGGAGACGGAGAAGGAAGGGTGGATAGCCCTACGAGCGGCGGTGCCCTG
GAGGAAGGTGGTCAGCGGGGTAGTTCATCGGAGGGGGGGGGTGGCGGCGG
CGGGGCCGCCGCTGGGGAAACAGCGCTGCAGGATTTGAGCAAGAATTGGT
TTTCAGCGGAGAATACGCTACGGGTCTACGGCGAGGAAAAATCCCCATCG
ACGCCCTCGTGCGCAGCAGCATCATGGAGGAGTTCCTGCAGGTCAGGATG
GCGGCGGGATCAGCGCCGGGAACCGATTCCAGCAGCCGCAATCTCGCAGC
GAACGGCGCAGGAAGTGGAGGAAAAGGAGACGGAGAAGGAAGGGTGGATA
GCCCTACGAGCGGCGGTGCCCTGGAGGAAGGTGGTCAGCGGGGTAGTTCA
TCGGAGGGGGGGGGTGGCGGCGGCGGGGCCGCCGCTGGGGAAACAGCGCT
GCAGGATTTGAGCAAGAATTGGTTTTCAGCGGAGAATACGCTACGGGTCT
ACGGCGAG
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